marker gene list
Mutant arf2-6 (IAA)
IAA 3 h
･･･up requlated genes
･･･down regulated genes
probeID AGICode Annotation gene
expression
1 261046_at AT1G01390 UDP-glucoronosyl/UDP-glucosyl transferase family protein 2.94
2 261562_at AT1G01750 actin-depolymerizing factor, putative -1.54
3 264574_at AT1G05300 ZIP5 (ZINC TRANSPORTER 5 PRECURSOR); cation transmembrane transporter -1.39
4 264689_at AT1G09900 pentatricopeptide (PPR) repeat-containing protein 0.72
5 264525_at AT1G10060 ATBCAT-1; branched-chain-amino-acid transaminase/ catalytic 0.92
6 263208_at AT1G10480 ZFP5 (ZINC FINGER PROTEIN 5); nucleic acid binding / transcription factor/ zinc ion binding -1.74
7 264347_at AT1G12040 LRX1 (LEUCINE-RICH REPEAT/EXTENSIN 1); protein binding / structural constituent of cell wall -1.61
8 259365_at AT1G13300 myb family transcription factor -1.40
9 255941_at AT1G20350 ATTIM17-1 (Arabidopsis thaliana translocase inner membrane subunit 17-1); P-P-bond-hydrolysis-driven protein transmembrane transporter -1.99
10 261459_at AT1G21100 O-methyltransferase, putative -2.56
11 262491_at AT1G21650 ATP binding 0.97
12 264859_at AT1G24280 G6PD3 (GLUCOSE-6-PHOSPHATE DEHYDROGENASE 3); glucose-6-phosphate dehydrogenase -1.60
13 245774_at AT1G30210 TCP24; transcription factor 0.84
14 265102_at AT1G30870 cationic peroxidase, putative -1.64
15 261991_at AT1G33700 catalytic -1.43
16 261157_at AT1G34510 peroxidase, putative -2.95
17 264415_at AT1G43160 RAP2.6 (related to AP2 6); DNA binding / transcription factor -1.86
18 261608_at AT1G49650 cell death associated protein-related 0.69
19 260989_at AT1G53450 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G14830.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G14830.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO39439.1) 0.88
20 262199_at AT1G53800 endonuclease 1.05
21 262198_at AT1G53830 ATPME2 (Arabidopsis thaliana pectin methylesterase 2) -1.38
22 256352_at AT1G54970 ATPRP1 (PROLINE-RICH PROTEIN 1); structural constituent of cell wall -2.01
23 256024_at AT1G58340 ZF14; transporter 1.77
24 262914_at AT1G59750 ARF1 (AUXIN RESPONSE FACTOR 1); transcription factor 0.73
25 263679_at AT1G59990 DEAD/DEAH box helicase, putative (RH22) 0.78
26 264941_at AT1G60680 AGD2 (ARF-GAP DOMAIN 2); aldo-keto reductase -1.43
27 264287_at AT1G61930 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G11700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17934.1); contains InterPro domain Protein of unknown function DUF584 (InterPro:IPR007608) -1.64
28 265118_at AT1G62660 beta-fructosidase (BFRUCT3) / beta-fructofuranosidase / invertase, vacuolar -1.39
29 261099_at AT1G62980 ATEXPA18 (ARABIDOPSIS THALIANA EXPANSIN A18) -2.05
30 256368_at AT1G66800 cinnamyl-alcohol dehydrogenase family / CAD family -1.90
31 264471_at AT1G67120 midasin-related 0.80
32 260199_at AT1G67590 remorin family protein 0.68
33 259996_at AT1G67910 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G24577.1); similar to unknown [Populus trichocarpa] (GB:ABK93048.1) 1.19
34 262260_at AT1G70850 MLP34 (MLP-LIKE PROTEIN 34) -1.35
35 260101_at AT1G73260 trypsin and protease inhibitor family protein / Kunitz family protein -1.80
36 262947_at AT1G75750 GASA1 (GAST1 PROTEIN HOMOLOG 1) -1.91
37 259874_at AT1G76660 Identical to Uncharacterized protein At1g76660 [Arabidopsis Thaliana] (GB:Q9SRE5); similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT5G52430.1); similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT4G25620.1); similar to Os01g0103800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001041759.1); similar to hypothetical protein OsI_000028 [Oryza sativa (indica cultivar-group)] (GB:EAY72181.1) 1.15
38 264482_at AT1G77210 sugar transporter, putative 0.87
39 266353_at AT2G01520 MLP328 (MLP-LIKE PROTEIN 328) -2.53
40 266330_at AT2G01530 MLP329 (MLP-LIKE PROTEIN 329) -1.74
41 263717_at AT2G13560 malate oxidoreductase, putative 0.76
42 266070_at AT2G18660 EXLB3 (EXPANSIN-LIKE B3 PRECURSOR) -2.07
43 267128_at AT2G23620 esterase, putative -2.29
44 263793_at AT2G24630 ATCSLC08 (Cellulose synthase-like C8); transferase, transferring glycosyl groups 0.74
45 263614_at AT2G25240 serine-type endopeptidase inhibitor -1.38
46 267612_at AT2G26690 nitrate transporter (NTP2) 0.73
47 263569_at AT2G27170 TTN7 (TITAN7); ATP binding 0.96
48 266226_at AT2G28740 HIS4 (Histone H4) 0.91
49 266279_at AT2G29290 tropinone reductase, putative / tropine dehydrogenase, putative 0.84
50 267497_at AT2G30540 glutaredoxin family protein -1.37
51 267116_at AT2G32560 F-box family protein 0.91
52 266957_at AT2G34640 PTAC12 (PLASTID TRANSCRIPTIONALLY ACTIVE12) 0.80
53 263847_at AT2G36970 UDP-glucoronosyl/UDP-glucosyl transferase family protein -1.27
54 267178_at AT2G37750 unknown protein -1.61
55 267582_at AT2G41970 protein kinase, putative -1.28
56 265265_at AT2G42900 similar to unnamed protein product [Vitis vinifera] (GB:CAO70018.1); contains InterPro domain Plant Basic Secretory Protein (InterPro:IPR007541) 0.70
57 260560_at AT2G43590 chitinase, putative 1.18
58 267222_at AT2G43880 polygalacturonase, putative / pectinase, putative -2.03
59 267191_at AT2G44110 MLO15 (MILDEW RESISTANCE LOCUS O 15); calmodulin binding -1.31
60 267385_at AT2G44380 DC1 domain-containing protein -1.63
61 266920_at AT2G45750 dehydration-responsive family protein -1.75
62 259161_at AT3G01500 CA1 (CARBONIC ANHYDRASE 1); carbonate dehydratase/ zinc ion binding 1.01
63 259058_at AT3G03470 CYP89A9 (cytochrome P450, family 87, subfamily A, polypeptide 9); oxygen binding -1.82
64 258913_at AT3G06450 anion exchange family protein 0.70
65 256243_at AT3G12500 ATHCHIB (BASIC CHITINASE); chitinase -1.63
66 259329_at AT3G16360 AHP4 (HPT PHOSPHOTRANSMITTER 4); histidine phosphotransfer kinase/ transferase, transferring phosphorus-containing groups 1.69
67 258421_at AT3G16690 nodulin MtN3 family protein -1.72
68 257720_at AT3G18450 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G18460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68031.1); contains InterPro domain Protein of unknown function Cys-rich (InterPro:IPR006461) -1.28
69 256935_at AT3G22570 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein -1.67
70 257759_at AT3G23070 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G14510.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79523.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71295.1); similar to CRM family member 3 [Zea mays] (GB:NP_001106061.1); contains InterPro domain CRS1/YhbY (InterPro:IPR001890) 0.93
71 256864_at AT3G23890 TOPII (TOPOISOMERASE II); ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing) 0.79
72 257774_at AT3G29250 oxidoreductase -2.27
73 256736_at AT3G29410 terpene synthase/cyclase family protein -1.74
74 245226_at AT3G29970 germination protein-related -2.87
75 252537_at AT3G45710 proton-dependent oligopeptide transport (POT) family protein -2.37
76 251946_at AT3G53540 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G28760.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G28760.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18092.1); contains domain PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P (DOWN SYNDROME CRITICAL REGION PROTEIN 5)-RELATED (PTHR21726) 0.81
77 251274_at AT3G61700 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G46420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39750.1); contains InterPro domain Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476) 0.75
78 251278_at AT3G61780 EMB1703 (EMBRYO DEFECTIVE 1703) 0.71
79 251256_at AT3G62300 agenet domain-containing protein 0.92
80 251226_at AT3G62680 PRP3 (PROLINE-RICH PROTEIN 3); structural constituent of cell wall -2.18
81 255632_at AT4G00680 actin-depolymerizing factor, putative -1.59
82 255621_at AT4G01390 meprin and TRAF homology domain-containing protein / MATH domain-containing protein 1.37
83 255516_at AT4G02270 pollen Ole e 1 allergen and extensin family protein -1.54
84 255306_at AT4G04740 CPK23 (calcium-dependent protein kinase 23); calmodulin-dependent protein kinase/ kinase 0.68
85 254783_at AT4G12830 hydrolase, alpha/beta fold family protein 1.20
86 245325_at AT4G14130 XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7); hydrolase, acting on glycosyl bonds 1.18
87 245555_at AT4G15390 transferase family protein -1.40
88 245321_at AT4G15545 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G16520.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71054.1); contains InterPro domain Paired amphipathic helix; (InterPro:IPR003822) 0.73
89 245411_at AT4G17240 similar to hypothetical protein 31.t00013 [Brassica oleracea] (GB:ABD65111.1) 1.44
90 245399_at AT4G17340 DELTA-TIP2/TIP2;2 (tonoplast intrinsic protein 2;2); water channel -1.36
91 254534_at AT4G19680 IRT2 (iron-responsive transporter 2); iron ion transmembrane transporter/ zinc ion transmembrane transporter -2.01
92 254502_at AT4G20130 PTAC14 (PLASTID TRANSCRIPTIONALLY ACTIVE14) 0.82
93 254092_at AT4G25090 respiratory burst oxidase, putative / NADPH oxidase, putative -1.36
94 254025_at AT4G25790 allergen V5/Tpx-1-related family protein -1.45
95 254044_at AT4G25820 XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9); hydrolase, acting on glycosyl bonds -1.70
96 253998_at AT4G26010 peroxidase, putative -1.50
97 254011_at AT4G26370 antitermination NusB domain-containing protein 0.74
98 253767_at AT4G28520 CRU3 (CRUCIFERIN 3); nutrient reservoir 1.48
99 253763_at AT4G28850 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative -3.03
100 253758_at AT4G29060 EMB2726 (EMBRYO DEFECTIVE 2726); translation elongation factor 0.73
101 253613_at AT4G30320 allergen V5/Tpx-1-related family protein -1.69
102 253353_at AT4G33730 pathogenesis-related protein, putative -1.77
103 253161_at AT4G35770 SEN1 (DARK INDUCIBLE 1) 1.32
104 246284_at AT4G36780 brassinosteroid signalling positive regulator-related 0.69
105 246197_at AT4G37010 caltractin, putative / centrin, putative -1.77
106 246269_at AT4G37110 protein binding / zinc ion binding 0.70
107 253073_at AT4G37410 CYP81F4 (cytochrome P450, family 81, subfamily F, polypeptide 4); oxygen binding -1.28
108 252833_at AT4G40090 AGP3 (ARABINOGALACTAN-PROTEIN 3) -1.86
109 251050_at AT5G02440 similar to unnamed protein product [Vitis vinifera] (GB:CAO15638.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65558.1) 0.92
110 250801_at AT5G04960 pectinesterase family protein -1.65
111 250778_at AT5G05500 pollen Ole e 1 allergen and extensin family protein -1.94
112 250575_at AT5G08240 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G23160.1) -1.29
113 250255_at AT5G13730 SIG4 (SIGMA FACTOR 4); DNA binding / DNA-directed RNA polymerase/ transcription factor 0.89
114 246530_at AT5G15725 unknown protein 0.69
115 246519_at AT5G15780 pollen Ole e 1 allergen and extensin family protein 2.71
116 250080_at AT5G16620 PDE120 (PIGMENT DEFECTIVE EMBRYO) 0.88
117 250056_at AT5G17660 methyltransferase 0.89
118 250062_at AT5G17760 AAA-type ATPase family protein 0.84
119 246004_at AT5G20630 GLP3 (GERMIN-LIKE PROTEIN 3); manganese ion binding / metal ion binding / nutrient reservoir 0.86
120 249848_at AT5G23220 NIC3 (NICOTINAMIDASE 3); catalytic/ nicotinamidase -1.60
121 249814_at AT5G23840 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein -1.66
122 249742_at AT5G24490 30S ribosomal protein, putative 1.01
123 246959_at AT5G24690 similar to RER1 (RETICULATA-RELATED 1) [Arabidopsis thaliana] (TAIR:AT5G22790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24736.1) 0.70
124 246849_at AT5G26850 binding 0.79
125 246652_at AT5G35190 proline-rich extensin-like family protein -1.76
126 249626_at AT5G37540 aspartyl protease family protein 0.78
127 249545_at AT5G38030 MATE efflux family protein -1.86
128 249436_at AT5G39980 pentatricopeptide (PPR) repeat-containing protein 1.59
129 249377_at AT5G40690 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G41730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14635.1) -1.35
130 249375_at AT5G40730 AGP24 (ARABINOGALACTAN PROTEIN 24) -1.44
131 249320_at AT5G40910 disease resistance protein (TIR-NBS-LRR class), putative 0.79
132 249245_at AT5G42280 DC1 domain-containing protein 0.81
133 249205_at AT5G42600 MRN (MARNERAL SYNTHASE); catalytic -5.68
134 249090_at AT5G43745 phosphotransferase-related 0.82
135 249064_at AT5G44250 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G15695.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61325.1); contains InterPro domain Protein of unknown function DUF829, eukaryotic (InterPro:IPR008547) 0.78
136 249053_at AT5G44440 FAD-binding domain-containing protein 4.23
137 249009_at AT5G44610 MAP18 (MICROTUBULE-ASSOCIATED PROTEIN 18); microtubule binding -1.49
138 248975_at AT5G45040 cytochrome c6 (ATC6) 0.94
139 248889_at AT5G46230 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G09310.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14438.1); contains InterPro domain Protein of unknown function DUF538 (InterPro:IPR007493) -1.56
140 248875_at AT5G46470 disease resistance protein (TIR-NBS-LRR class), putative 0.72
141 248752_at AT5G47600 heat shock protein-related 1.31
142 248723_at AT5G47950 transferase family protein -1.77
143 248728_at AT5G48000 CYP708A2 (cytochrome P450, family 708, subfamily A, polypeptide 2); oxygen binding -2.78
144 248729_at AT5G48010 pentacyclic triterpene synthase, putative -3.05
145 248547_at AT5G50280 EMB1006 (EMBRYO DEFECTIVE 1006) 0.74
146 248197_at AT5G54190 PORA (Protochlorophyllide reductase A); oxidoreductase/ protochlorophyllide reductase 1.99
147 247871_at AT5G57530 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative -2.40
148 247914_at AT5G57540 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative -1.91
149 247468_at AT5G62000 ARF2 (AUXIN RESPONSE FACTOR 2); transcription factor -4.79
150 247508_at AT5G62000 ARF2 (AUXIN RESPONSE FACTOR 2); transcription factor 2.19
151 247460_at AT5G62050 OXA1 (Oxidase assembly 1); P-P-bond-hydrolysis-driven protein transmembrane transporter 0.69
152 247457_at AT5G62170 similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G51850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17701.1) 0.81
153 247465_at AT5G62190 PRH75 (plant RNA helicase 75); ATP-dependent helicase 1.34
154 247385_at AT5G63420 EMB2746 (EMBRYO DEFECTIVE 2746); catalytic 1.38
155 247043_at AT5G66880 SNRK2-3/SNRK2.3/SRK2I (SNF1-RELATED PROTEIN KINASE 2.3); kinase/ protein kinase 0.70
156 246991_at AT5G67400 peroxidase 73 (PER73) (P73) (PRXR11) -2.01
157 245049_at ATCG00050 Homologous to the bacterial ribosomal protein S16 0.86
158 244980_at ATCG00760 encodes a chloroplast ribosomal protein L36, a constituent of the large subunit of the ribosomal complex 1.29