marker gene list
| Mutant lwd1_lwd2 |
| Mutant lfy-12(shoot apex) |
･･･up requlated genes
･･･down regulated genes| probeID | AGICode | Annotation | gene expression |
|
|---|---|---|---|---|
| 1 | 261569_at | AT1G01060 | LHY (LATE ELONGATED HYPOCOTYL); DNA binding / transcription factor | -2.46 |
| 2 | 261059_at | AT1G01250 | AP2 domain-containing transcription factor, putative | -1.53 |
| 3 | 262113_at | AT1G02820 | late embryogenesis abundant 3 family protein / LEA3 family protein | -3.22 |
| 4 | 256060_at | AT1G07050 | CONSTANS-like protein-related | 4.47 |
| 5 | 256057_at | AT1G07180 | ATNDI1/NDA1 (ALTERNATIVE NAD(P)H DEHYDROGENASE 1); NADH dehydrogenase | -2.17 |
| 6 | 264436_at | AT1G10370 | ATGSTU17/ERD9/GST30/GST30B (EARLY-RESPONSIVE TO DEHYDRATION 9); glutathione transferase | -1.51 |
| 7 | 261202_at | AT1G12910 | ATAN11 (ANTHOCYANIN11); nucleotide binding | -4.26 |
| 8 | 262826_at | AT1G13080 | CYP71B2 (CYTOCHROME P450 71B2); oxygen binding | -2.21 |
| 9 | 261248_at | AT1G20030 | pathogenesis-related thaumatin family protein | 2.38 |
| 10 | 262503_at | AT1G21670 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G21680.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73514.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61906.1); contains InterPro domain WD40-like Beta Propeller (InterPro:IPR011659); contains InterPro domain Six-bladed beta-propeller, TolB-like (InterPro:IPR011042) | 1.26 |
| 11 | 245668_at | AT1G28330 | DRM1 (DORMANCY-ASSOCIATED PROTEIN 1) | 1.35 |
| 12 | 261191_at | AT1G32900 | starch synthase, putative | -2.52 |
| 13 | 245755_at | AT1G35210 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G22470.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82663.1) | 1.71 |
| 14 | 261363_at | AT1G41830 | SKS6 (SKU5 Similar 6); pectinesterase | -1.28 |
| 15 | 260603_at | AT1G55960 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G13062.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G13062.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41766.1); contains InterPro domain Lipid-binding START (InterPro:IPR002913) | -1.84 |
| 16 | 246403_at | AT1G57590 | carboxylesterase | -2.19 |
| 17 | 264738_at | AT1G62250 | similar to unnamed protein product [Vitis vinifera] (GB:CAO21221.1) | -1.56 |
| 18 | 262369_at | AT1G73010 | phosphoric monoester hydrolase | 1.40 |
| 19 | 259927_at | AT1G75100 | JAC1 (J-DOMAIN PROTEIN REQUIRED FOR CHLOROPLAST ACCUMULATION RESPONSE 1); heat shock protein binding | -2.11 |
| 20 | 264045_at | AT2G22450 | riboflavin biosynthesis protein, putative | 1.39 |
| 21 | 265900_at | AT2G25730 | binding / heme binding | 1.32 |
| 22 | 267461_at | AT2G33830 | dormancy/auxin associated family protein | 1.97 |
| 23 | 267364_at | AT2G40080 | ELF4 (EARLY FLOWERING 4) | 1.13 |
| 24 | 266391_at | AT2G41290 | strictosidine synthase family protein | -1.39 |
| 25 | 263495_at | AT2G42530 | COR15B | 1.48 |
| 26 | 263979_at | AT2G42840 | PDF1 (PROTODERMAL FACTOR 1) | 1.16 |
| 27 | 263777_at | AT2G46450 | ATCNGC12 (cyclic nucleotide gated channel 12); cyclic nucleotide binding / ion channel | -1.20 |
| 28 | 258497_at | AT3G02380 | COL2 (CONSTANS-LIKE 2); transcription factor/ zinc ion binding | -3.74 |
| 29 | 259244_at | AT3G07650 | COL9 (CONSTANS-LIKE 9); transcription factor/ zinc ion binding | 2.91 |
| 30 | 258723_at | AT3G09600 | myb family transcription factor | -2.13 |
| 31 | 256266_at | AT3G12320 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G06980.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75675.1) | -2.66 |
| 32 | 257855_at | AT3G13040 | myb family transcription factor | -1.31 |
| 33 | 258225_at | AT3G15630 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G52720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46032.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71657.1) | 1.36 |
| 34 | 257985_at | AT3G20810 | transcription factor jumonji (jmjC) domain-containing protein | 2.24 |
| 35 | 257262_at | AT3G21890 | zinc finger (B-box type) family protein | -2.51 |
| 36 | 257264_at | AT3G22060 | receptor protein kinase-related | -1.68 |
| 37 | 257163_at | AT3G24310 | MYB305 (myb domain protein 305); DNA binding / transcription factor | -3.10 |
| 38 | 252037_at | AT3G51920 | CAM9 (CALMODULIN 9); calcium ion binding | -1.61 |
| 39 | 252010_at | AT3G52740 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G44450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70571.1) | -1.31 |
| 40 | 251869_at | AT3G54500 | similar to dentin sialophosphoprotein-related [Arabidopsis thaliana] (TAIR:AT5G64170.1); similar to dentin sialophosphoprotein-related [Arabidopsis thaliana] (TAIR:AT5G64170.2); similar to conserved hypothetical protein [Medicago truncatula] (GB:ABD28297.1) | -2.14 |
| 41 | 251713_at | AT3G56080 | dehydration-responsive protein-related | -1.31 |
| 42 | 251272_at | AT3G61890 | ATHB-12 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 12); transcription factor | -1.96 |
| 43 | 251155_at | AT3G63160 | unknown protein | 1.16 |
| 44 | 255331_at | AT4G04330 | similar to unnamed protein product [Vitis vinifera] (GB:CAO69665.1) | 1.15 |
| 45 | 254998_at | AT4G09760 | choline kinase, putative | -1.39 |
| 46 | 245576_at | AT4G14770 | tesmin/TSO1-like CXC domain-containing protein | 1.27 |
| 47 | 245528_at | AT4G15530 | PPDK (PYRUVATE ORTHOPHOSPHATE DIKINASE); kinase/ pyruvate, phosphate dikinase | -1.66 |
| 48 | 245433_at | AT4G17140 | pleckstrin homology (PH) domain-containing protein | 1.45 |
| 49 | 245434_at | AT4G17140 | pleckstrin homology (PH) domain-containing protein | 1.32 |
| 50 | 254691_at | AT4G17840 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G35260.1); similar to hypothetical protein 40.t00061 [Brassica oleracea] (GB:ABD65174.1) | -1.47 |
| 51 | 254639_at | AT4G18750 | pentatricopeptide (PPR) repeat-containing protein | 1.14 |
| 52 | 254545_at | AT4G19830 | immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein | -1.25 |
| 53 | 254233_at | AT4G23800 | high mobility group (HMG1/2) family protein | 1.47 |
| 54 | 254125_at | AT4G24670 | alliinase family protein | -1.21 |
| 55 | 253480_at | AT4G31840 | plastocyanin-like domain-containing protein | 1.18 |
| 56 | 253292_at | AT4G33985 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G15590.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO71847.1); contains InterPro domain Protein of unknown function DUF1685 (InterPro:IPR012881) | 1.96 |
| 57 | 253078_at | AT4G36180 | leucine-rich repeat family protein | 1.50 |
| 58 | 251066_at | AT5G01880 | zinc finger (C3HC4-type RING finger) family protein | -1.65 |
| 59 | 251075_at | AT5G01890 | leucine-rich repeat transmembrane protein kinase, putative | 1.07 |
| 60 | 251028_at | AT5G02230 | haloacid dehalogenase-like hydrolase family protein | -1.43 |
| 61 | 250649_at | AT5G06690 | (THIOREDOXIN-LIKE 5); thiol-disulfide exchange intermediate | 1.36 |
| 62 | 250665_at | AT5G06980 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G12320.1) | -2.10 |
| 63 | 246523_at | AT5G15850 | COL1 (CONSTANS-LIKE 1); transcription factor/ zinc ion binding | -2.73 |
| 64 | 249850_at | AT5G23240 | DNAJ heat shock N-terminal domain-containing protein | 3.22 |
| 65 | 249797_at | AT5G23750 | remorin family protein | -1.33 |
| 66 | 249769_at | AT5G24120 | SIGE (RNA polymerase sigma subunit E); DNA binding / DNA-directed RNA polymerase/ sigma factor/ transcription factor | -2.07 |
| 67 | 249719_at | AT5G35735 | auxin-responsive family protein | 1.36 |
| 68 | 249606_at | AT5G37260 | CIR1/RVE2 (CIRCADIAN 1); DNA binding / transcription factor | 3.30 |
| 69 | 249174_at | AT5G42900 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G33980.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75496.1) | 4.05 |
| 70 | 248756_at | AT5G47560 | ATSDAT/ATTDT (TONOPLAST DICARBOXYLATE TRANSPORTER); malate transmembrane transporter/ sodium:dicarboxylate symporter | -1.76 |
| 71 | 248744_at | AT5G48250 | zinc finger (B-box type) family protein | 2.58 |
| 72 | 248502_at | AT5G50450 | zinc finger (MYND type) family protein | 2.10 |
| 73 | 248467_at | AT5G50800 | nodulin MtN3 family protein | -2.31 |
| 74 | 247937_at | AT5G57110 | ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8); calcium-transporting ATPase/ calmodulin binding | 1.78 |
| 75 | 247668_at | AT5G60100 | APRR3 (PSEUDO-RESPONSE REGULATOR 3); transcription regulator | 2.55 |
| 76 | 247478_at | AT5G62360 | invertase/pectin methylesterase inhibitor family protein | 2.08 |
| 77 | 247386_at | AT5G63420 | EMB2746 (EMBRYO DEFECTIVE 2746); catalytic | 1.15 |
| 78 | 247280_at | AT5G64260 | phosphate-responsive protein, putative | 1.28 |
| 79 | 247246_at | AT5G64620 | C/VIF2 (CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2); pectinesterase inhibitor | 1.79 |
| 80 | 247193_at | AT5G65380 | ripening-responsive protein, putative | -1.23 |
| 81 | 247147_at | AT5G65630 | GTE7 (GLOBAL TRANSCRIPTION FACTOR GROUP E 7); DNA binding | 1.28 |
| 82 | 247099_at | AT5G66500 | pentatricopeptide (PPR) repeat-containing protein | 1.31 |