marker gene list
| Mutant cry1 |
| FarRed Light 45min |
･･･up requlated genes
･･･down regulated genes| probeID | AGICode | Annotation | gene expression |
|
|---|---|---|---|---|
| 1 | 261480_at | AT1G14280 | PKS2 (PHYTOCHROME KINASE SUBSTRATE 2) | 0.56 |
| 2 | 255774_at | AT1G18620 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G74160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49165.1) | 0.57 |
| 3 | 255786_at | AT1G19670 | ATCLH1 (CORONATINE-INDUCED PROTEIN 1) | -0.69 |
| 4 | 261221_at | AT1G19960 | similar to transmembrane receptor [Arabidopsis thaliana] (TAIR:AT2G32140.1) | -0.69 |
| 5 | 260877_at | AT1G21500 | similar to hypothetical protein OsI_030994 [Oryza sativa (indica cultivar-group)] (GB:EAZ09762.1); similar to Os09g0517000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001063677.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD33829.1) | 0.71 |
| 6 | 263005_at | AT1G54540 | similar to harpin-induced protein-related / HIN1-related / harpin-responsive protein-related [Arabidopsis thaliana] (TAIR:AT1G65690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62044.1); contains InterPro domain Harpin-induced 1 (InterPro:IPR010847) | -0.72 |
| 7 | 256452_at | AT1G75240 | ATHB33 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 33); DNA binding / transcription factor | -2.62 |
| 8 | 256453_at | AT1G75270 | DHAR2; glutathione dehydrogenase (ascorbate) | -4.83 |
| 9 | 256454_at | AT1G75280 | isoflavone reductase, putative | -6.54 |
| 10 | 265569_at | AT2G05620 | PGR5 (PROTON GRADIENT REGULATION 5) | -1.19 |
| 11 | 265510_at | AT2G05630 | ATG8D (autophagy gene 8-related); microtubule binding | -1.68 |
| 12 | 263584_at | AT2G17040 | ANAC036 (Arabidopsis NAC domain containing protein 36); transcription factor | -0.86 |
| 13 | 265350_at | AT2G22620 | lyase | -0.94 |
| 14 | 267452_at | AT2G33860 | ETT (ETTIN); transcription factor | 1.06 |
| 15 | 266403_at | AT2G38600 | acid phosphatase class B family protein | 1.15 |
| 16 | 259104_at | AT3G02170 | LNG2 (LONGIFOLIA2) | 0.57 |
| 17 | 256325_at | AT3G02330 | pentatricopeptide (PPR) repeat-containing protein | 1.00 |
| 18 | 258982_at | AT3G08870 | lectin protein kinase, putative | -0.74 |
| 19 | 258945_at | AT3G10660 | CPK2 (CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2); calmodulin-dependent protein kinase/ kinase | -0.77 |
| 20 | 258196_at | AT3G13980 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G54200.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69469.1) | 0.70 |
| 21 | 258436_at | AT3G16720 | ATL2 (Arabidopsis T?xicos en Levadura 2); protein binding / zinc ion binding | -0.68 |
| 22 | 258327_at | AT3G22640 | cupin family protein | 2.64 |
| 23 | 257100_at | AT3G25010 | disease resistance family protein | 0.97 |
| 24 | 256710_at | AT3G30350 | unknown protein | -2.98 |
| 25 | 252635_at | AT3G44510 | similar to esterase/lipase/thioesterase family protein [Arabidopsis thaliana] (TAIR:AT1G08310.1); similar to esterase/lipase/thioesterase family protein [Arabidopsis thaliana] (TAIR:AT1G08310.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN60741.1); contains domain SSF53474 (SSF53474) | -0.95 |
| 26 | 252594_at | AT3G45680 | proton-dependent oligopeptide transport (POT) family protein | 0.77 |
| 27 | 252261_at | AT3G49500 | RDR6 (RNA-DEPENDENT RNA POLYMERASE 6); nucleic acid binding | 0.51 |
| 28 | 252131_at | AT3G50930 | AAA-type ATPase family protein | -0.82 |
| 29 | 251725_at | AT3G56260 | unknown protein | -0.93 |
| 30 | 255068_at | AT4G08920 | CRY1 (CRYPTOCHROME 1) | -5.85 |
| 31 | 254787_at | AT4G12690 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G04220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41124.1); contains InterPro domain Protein of unknown function DUF868, plant (InterPro:IPR008586) | 0.83 |
| 32 | 254773_at | AT4G13410 | ATCSLA15 (Cellulose synthase-like A15); transferase, transferring glycosyl groups | -1.55 |
| 33 | 245265_at | AT4G14400 | ACD6 (ACCELERATED CELL DEATH 6); protein binding | -1.48 |
| 34 | 254327_at | AT4G22490 | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | -1.08 |
| 35 | 254153_at | AT4G24450 | ATGWD2/GWD3/PWD (PHOSPHOGLUCAN, WATER DIKINASE); ATP binding / kinase | -0.75 |
| 36 | 254065_at | AT4G25420 | GA5 (GA REQUIRING 5); gibberellin 20-oxidase/ gibberellin 3-beta-dioxygenase | 0.62 |
| 37 | 253689_at | AT4G29770 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G29760.1) | 2.21 |
| 38 | 253660_at | AT4G30140 | GDSL-motif lipase/hydrolase family protein | -0.84 |
| 39 | 253278_at | AT4G34220 | leucine-rich repeat transmembrane protein kinase, putative | 0.54 |
| 40 | 252965_at | AT4G38860 | auxin-responsive protein, putative | 0.80 |
| 41 | 250983_at | AT5G02780 | In2-1 protein, putative | 1.23 |
| 42 | 250327_at | AT5G12050 | similar to unnamed protein product [Vitis vinifera] (GB:CAO45643.1) | 1.05 |
| 43 | 250013_at | AT5G18040 | similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G18065.1) | 0.99 |
| 44 | 249843_at | AT5G23570 | SGS3 (SUPPRESSOR OF GENE SILENCING 3) | -1.84 |
| 45 | 249080_at | AT5G43990 | SUVR2; histone-lysine N-methyltransferase/ zinc ion binding | 0.55 |
| 46 | 248683_at | AT5G48490 | protease inhibitor/seed storage/lipid transfer protein (LTP) family protein | 0.76 |
| 47 | 248050_at | AT5G56100 | glycine-rich protein / oleosin | 0.52 |
| 48 | 247643_at | AT5G60450 | ARF4 (AUXIN RESPONSE FACTOR 4); transcription factor | 1.17 |
| 49 | 247638_at | AT5G60490 | FLA12 (fasciclin-like arabinogalactan-protein 12) | 0.53 |
| 50 | 247459_at | AT5G62200 | embryo-specific protein-related | -0.84 |