AGICode | ATCG01080 |
Description | NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | ATCG01080 | NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 | NDHG | 1 | 0.31 | -0.31 | ||
2 | ATCG00730 | photosynthetic electron transfer D | photosynthetic electron transfer D | 0.89 | 0.3 | -0.31 | ||
3 | ATCG01070 | NADH-ubiquinone/plastoquinone oxidoreductase chain 4L | NDHE | 0.87 | 0.3 | -0.32 | ||
4 | ATCG00330 | chloroplast ribosomal protein S14 | chloroplast ribosomal protein S14 | 0.83 | 0.31 | -0.33 | ||
5 | ATCG00360 | Tetratricopeptide repeat (TPR)-like superfamily protein | YCF3 | 0.8 | 0.32 | -0.32 | ||
6 | ATCG00600 | PETG | PETG | 0.79 | 0.31 | -0.32 | ||
7 | ATCG00660 | ribosomal protein L20 | ribosomal protein L20 | 0.79 | 0.33 | -0.32 | ||
8 | ATCG00690 | photosystem II reaction center protein T | photosystem II reaction center protein T, PSBTC |
0.73 | 0.31 | -0.32 | ||
9 | ATCG00150 | ATPase, F0 complex, subunit A protein | ATPI | 0.72 | 0.31 | -0.3 | ||
10 | ATCG00430 | photosystem II reaction center protein G | photosystem II reaction center protein G |
0.71 | 0.34 | -0.31 | ||
11 | ATCG00420 | NADH dehydrogenase subunit J | NADH dehydrogenase subunit J | 0.71 | 0.3 | -0.31 | ||
12 | ATCG01050 | NADH-Ubiquinone/plastoquinone (complex I) protein | NDHD | 0.71 | 0.32 | -0.32 | ||
13 | ATCG00120 | ATP synthase subunit alpha | ATP synthase subunit alpha | 0.71 | 0.3 | -0.35 | ||
14 | ATCG01040 | Cytochrome C assembly protein | YCF5 | 0.7 | 0.31 | -0.29 | ||
15 | ATCG00510 | photsystem I subunit I | photsystem I subunit I | 0.7 | 0.3 | -0.29 | ||
16 | ATCG00700 | photosystem II reaction center protein N | photosystem II reaction center protein N |
0.68 | 0.33 | -0.31 | ||
17 | ATCG01060 | iron-sulfur cluster binding;electron carriers;4 iron, 4 sulfur cluster binding |
PSAC | 0.67 | 0.3 | -0.3 | ||
18 | ATCG00520 | unfolded protein binding | YCF4 | 0.67 | 0.3 | -0.31 | ||
19 | ATCG00210 | electron transporter, transferring electrons within cytochrome b6/f complex of photosystem IIs |
YCF6 | 0.66 | 0.32 | -0.3 | ||
20 | ATCG00280 | photosystem II reaction center protein C | photosystem II reaction center protein C |
0.65 | 0.32 | -0.32 | ||
21 | ATCG00270 | photosystem II reaction center protein D | photosystem II reaction center protein D |
0.65 | 0.3 | -0.3 | ||
22 | ATCG01010 | NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein | NDHF | 0.64 | 0.31 | -0.3 | ||
23 | ATCG00590 | electron carriers | ORF31 | 0.63 | 0.31 | -0.31 | ||
24 | ATCG01120 | chloroplast ribosomal protein S15 | chloroplast ribosomal protein S15 | 0.63 | 0.33 | -0.32 | ||
25 | AT5G62260 | AT hook motif DNA-binding family protein | -0.62 | 0.32 | -0.29 | |||
26 | AT3G55480 | protein affected trafficking 2 | beta-subunit of adaptor protein complex 3, protein affected trafficking 2 |
0.62 | 0.34 | -0.3 | ||
27 | ATCG00140 | ATP synthase subunit C family protein | ATPH | 0.6 | 0.33 | -0.31 | ||
28 | ATCG00500 | acetyl-CoA carboxylase carboxyl transferase subunit beta | acetyl-CoA carboxylase carboxyl transferase subunit beta |
0.6 | 0.33 | -0.31 | ||
29 | AT5G13880 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.59 | 0.3 | -0.34 | |||
30 | AT4G02210 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). |
0.59 | 0.31 | -0.31 | |||
31 | ATCG00160 | ribosomal protein S2 | ribosomal protein S2 | 0.59 | 0.32 | -0.34 | ||
32 | AT5G22790 | reticulata-related 1 | reticulata-related 1 | -0.59 | 0.34 | -0.32 | ||
33 | AT2G16250 | Leucine-rich repeat protein kinase family protein | -0.58 | 0.32 | -0.3 | |||
34 | AT1G32270 | syntaxin, putative | ATSYP24, SYNTAXIN 24 | 0.58 | 0.32 | -0.32 | ||
35 | AT1G49220 | RING/U-box superfamily protein | 0.57 | 0.3 | -0.3 | |||
36 | ATCG00070 | photosystem II reaction center protein K precursor | photosystem II reaction center protein K precursor |
0.57 | 0.32 | -0.32 | ||
37 | AT5G26260 | TRAF-like family protein | -0.57 | 0.34 | -0.31 | |||
38 | AT5G01160 | RING/U-box superfamily protein | -0.56 | 0.32 | -0.31 | |||
39 | AT5G48100 | Laccase/Diphenol oxidase family protein | ATLAC15, LACCASE-LIKE 15, TRANSPARENT TESTA 10 |
-0.56 | 0.35 | -0.31 | ||
40 | AT1G12820 | auxin signaling F-box 3 | auxin signaling F-box 3 | 0.56 | 0.31 | -0.33 | ||
41 | AT5G15290 | Uncharacterised protein family (UPF0497) | Casparian strip membrane domain protein 5 |
-0.56 | 0.32 | -0.32 | ||
42 | AT2G26290 | root-specific kinase 1 | root-specific kinase 1 | -0.56 | 0.32 | -0.32 | ||
43 | ATCG00190 | RNA polymerase subunit beta | RNA polymerase subunit beta | 0.56 | 0.31 | -0.28 | ||
44 | AT1G10990 | unknown protein; Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.56 | 0.32 | -0.31 | |||
45 | AT5G60010 | ferric reductase-like transmembrane component family protein |
0.56 | 0.33 | -0.3 | |||
46 | AT3G30350 | Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). |
root meristem growth factor 4 | -0.55 | 0.31 | -0.32 | ||
47 | AT1G56150 | SAUR-like auxin-responsive protein family | 0.55 | 0.29 | -0.33 | |||
48 | AT2G05010 | transposable element gene | 0.54 | 0.33 | -0.29 | |||
49 | AT2G36120 | Glycine-rich protein family | DEFECTIVELY ORGANIZED TRIBUTARIES 1 |
-0.54 | 0.32 | -0.33 | ||
50 | ATCG00130 | ATPase, F0 complex, subunit B/B', bacterial/chloroplast | ATPF | 0.54 | 0.33 | -0.31 | ||
51 | AT2G03220 | fucosyltransferase 1 | ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1, fucosyltransferase 1, MURUS 2 |
-0.53 | 0.31 | -0.3 | ||
52 | AT5G21110 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.53 | 0.32 | -0.31 | |||
53 | AT4G26560 | calcineurin B-like protein 7 | calcineurin B-like protein 7 | -0.53 | 0.33 | -0.32 | ||
54 | AT2G46990 | indole-3-acetic acid inducible 20 | indole-3-acetic acid inducible 20 | -0.52 | 0.33 | -0.33 | ||
55 | AT5G06950 | bZIP transcription factor family protein | AHBP-1B, TGA2 | 0.52 | 0.32 | -0.32 | ||
56 | AT1G05540 | Protein of unknown function (DUF295) | 0.51 | 0.32 | -0.32 | |||
57 | AT1G55040 | zinc finger (Ran-binding) family protein | -0.51 | 0.3 | -0.33 | |||
58 | AT3G01900 | cytochrome P450, family 94, subfamily B, polypeptide 2 | cytochrome P450, family 94, subfamily B, polypeptide 2 |
-0.5 | 0.31 | -0.32 | ||
59 | AT4G00110 | UDP-D-glucuronate 4-epimerase 3 | UDP-D-glucuronate 4-epimerase 3 | -0.5 | 0.33 | -0.3 | ||
60 | AT4G07970 | transposable element gene | -0.49 | 0.31 | -0.31 | |||
61 | AT3G06870 | proline-rich family protein | 0.49 | 0.31 | -0.3 | |||
62 | AT2G17150 | Plant regulator RWP-RK family protein | -0.48 | 0.31 | -0.29 | |||
63 | AT4G26800 | Pentatricopeptide repeat (PPR) superfamily protein | -0.48 | 0.3 | -0.32 | |||
64 | AT4G03230 | S-locus lectin protein kinase family protein | -0.47 | 0.29 | -0.29 | |||
65 | AT5G57970 | DNA glycosylase superfamily protein | -0.46 | 0.32 | -0.31 | |||
66 | AT3G47680 | DNA binding | -0.46 | 0.3 | -0.32 | |||
67 | AT1G17520 | Homeodomain-like/winged-helix DNA-binding family protein | -0.45 | 0.32 | -0.3 | |||
68 | AT3G62320 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
-0.45 | 0.31 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
69 | C0193 | Pantothenic acid | D,L-Pantothenic acid | Pantothenate | pantothenate biosynthesis | 0.69 | 0.43 | -0.49 |