ATCG00570 : photosystem II reaction center protein F
Query Information
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AGICode ATCG00570
Description photosystem II reaction center protein F
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 ATCG00570 photosystem II reaction center protein F photosystem II reaction center
protein F		 1 0.32 -0.32
2 ATCG00580 photosystem II reaction center protein E photosystem II reaction center
protein E		 0.9 0.33 -0.33
3 ATCG00480 ATP synthase subunit beta ATP synthase subunit beta, ATP
synthase subunit beta		 0.84 0.31 -0.31
4 AT3G05350 Metallopeptidase M24 family protein 0.84 0.3 -0.32
5 AT3G27925 DegP protease 1 DegP protease 1, DegP protease 1 0.81 0.33 -0.29
6 AT1G29700 Metallo-hydrolase/oxidoreductase superfamily protein 0.81 0.32 -0.29
7 AT2G28800 63 kDa inner membrane family protein ALBINO 3 0.81 0.31 -0.3
8 AT3G20930 RNA-binding (RRM/RBD/RNP motifs) family protein 0.81 0.29 -0.33
9 ATCG00560 photosystem II reaction center protein L photosystem II reaction center
protein L		 0.81 0.31 -0.34
10 AT2G42570 TRICHOME BIREFRINGENCE-LIKE 39 TRICHOME BIREFRINGENCE-LIKE 39 -0.8 0.34 -0.33
11 AT5G13410 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.8 0.35 -0.31
12 AT3G01370 CRM family member 2 Arabidopsis thaliana CRM family
member 2, CRM family member 2		 0.79 0.34 -0.31
13 AT3G26744 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 A. THALIANA INDUCER OF CBP
EXPRESSION 1, INDUCER OF CBF
EXPRESSION 1, SCREAM		 0.79 0.32 -0.31
14 AT1G32160 Protein of unknown function (DUF760) 0.78 0.31 -0.3
15 AT2G04700 ferredoxin thioredoxin reductase catalytic beta chain
family protein		 0.78 0.31 -0.33
16 AT4G33510 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase 3-deoxy-d-arabino-heptulosonate
7-phosphate synthase		 0.78 0.31 -0.31
17 AT1G25290 RHOMBOID-like protein 10 RHOMBOID-like protein 10,
RHOMBOID-like protein 10		 0.78 0.32 -0.32
18 AT4G01800 Albino or Glassy Yellow 1 Albino or Glassy Yellow 1,
Arabidopsis thaliana chloroplast
SecA, SECA1		 0.78 0.3 -0.3
19 AT2G35270 Predicted AT-hook DNA-binding family protein GIANT KILLER -0.77 0.32 -0.33
20 ATCG00760 ribosomal protein L36 ribosomal protein L36 0.77 0.33 -0.32
21 AT1G01790 K+ efflux antiporter 1 K+ EFFLUX ANTIPORTER 1, K+ efflux
antiporter 1		 0.76 0.31 -0.32
22 ATCG00470 ATP synthase epsilon chain ATP synthase epsilon chain 0.76 0.31 -0.31
23 AT1G49390 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.76 0.34 -0.3
24 AT5G03880 Thioredoxin family protein 0.76 0.29 -0.31
25 AT5G58140 phototropin 2 NON PHOTOTROPIC HYPOCOTYL 1-LIKE,
phototropin 2		 0.76 0.3 -0.31
26 AT3G63160 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast outer
membrane, thylakoid, chloroplast thylakoid membrane,
chloroplast, chloroplast envelope; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: outer envelope
membrane protein 7 (TAIR:AT3G52420.1); Has 26 Blast hits to
26 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes
- 0 (source: NCBI BLink).		 0.76 0.32 -0.3
27 AT1G29280 WRKY DNA-binding protein 65 WRKY DNA-BINDING PROTEIN 65, WRKY
DNA-binding protein 65		 -0.76 0.27 -0.35
28 AT5G04900 NYC1-like NYC1-like 0.76 0.33 -0.32
29 AT5G04440 Protein of unknown function (DUF1997) 0.76 0.31 -0.31
30 AT2G30950 FtsH extracellular protease family FTSH2, VARIEGATED 2 0.75 0.3 -0.3
31 AT5G24000 Protein of unknown function (DUF819) 0.75 0.33 -0.32
32 AT2G30150 UDP-Glycosyltransferase superfamily protein 0.75 0.29 -0.3
33 AT4G09900 methyl esterase 12 ARABIDOPSIS THALIANA METHYL
ESTERASE 12, methyl esterase 12		 0.75 0.3 -0.32
34 ATCG01090 NADPH dehydrogenases NDHI 0.75 0.33 -0.32
35 AT4G14210 phytoene desaturase 3 PIGMENT DEFECTIVE 226, PHYTOENE
DESATURASE, phytoene desaturase 3		 0.75 0.34 -0.31
36 AT5G03910 ABC2 homolog 12 ATP-binding cassette B29,
ARABIDOPSIS THALIANA ABC
TRANSPORTER HOMOLOG 12, ABC2
homolog 12		 0.75 0.32 -0.31
37 ATCG00780 ribosomal protein L14 ribosomal protein L14 0.75 0.32 -0.3
38 AT1G65260 plastid transcriptionally active 4 plastid transcriptionally active
4, VESICLE-INDUCING PROTEIN IN
PLASTIDS 1		 0.74 0.32 -0.32
39 AT3G17420 glyoxysomal protein kinase 1 glyoxysomal protein kinase 1 -0.74 0.31 -0.34
40 AT2G24270 aldehyde dehydrogenase 11A3 aldehyde dehydrogenase 11A3 0.74 0.31 -0.32
41 AT4G33500 Protein phosphatase 2C family protein 0.74 0.3 -0.33
42 AT1G75240 homeobox protein 33 homeobox protein 33, homeobox
protein 33, zinc-finger
homeodomain 5		 0.74 0.32 -0.29
43 AT1G68830 STT7 homolog STN7 STT7 homolog STN7 0.74 0.3 -0.31
44 AT1G67830 alpha-fucosidase 1 Arabidopsis thaliana
alpha-fucosidase 1,
alpha-fucosidase 1		 0.74 0.32 -0.3
45 AT1G12330 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G12900.1); Has 249 Blast hits to 249 proteins in
27 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi -
14; Plants - 217; Viruses - 0; Other Eukaryotes - 11
(source: NCBI BLink).		 0.74 0.3 -0.33
46 AT2G31400 genomes uncoupled 1 genomes uncoupled 1 0.74 0.33 -0.33
47 AT4G23940 FtsH extracellular protease family 0.73 0.34 -0.33
48 AT1G67440 Minichromosome maintenance (MCM2/3/5) family protein embryo defective 1688 0.73 0.33 -0.31
49 ATCG00750 ribosomal protein S11 ribosomal protein S11 0.73 0.29 -0.32
50 AT4G23690 Disease resistance-responsive (dirigent-like protein)
family protein		 -0.73 0.31 -0.32
51 ATCG00550 photosystem II reaction center protein J photosystem II reaction center
protein J		 0.73 0.31 -0.32
52 AT5G12150 Rho GTPase activation protein (RhoGAP) with PH domain 0.73 0.3 -0.33
53 AT1G67840 chloroplast sensor kinase chloroplast sensor kinase 0.73 0.32 -0.31
54 AT1G53210 sodium/calcium exchanger family protein / calcium-binding
EF hand family protein		 0.72 0.3 -0.32
55 ATCG00530 CemA-like proton extrusion protein-related YCF10 0.72 0.32 -0.34
56 AT2G45590 Protein kinase superfamily protein 0.72 0.3 -0.31
57 AT5G17330 glutamate decarboxylase glutamate decarboxylase, GLUTAMATE
DECARBOXYLASE 1		 -0.72 0.31 -0.33
58 AT5G12130 integral membrane TerC family protein TELLURITE RESISTANCE C, PIGMENT
DEFECTIVE 149		 0.72 0.3 -0.34
59 AT1G08060 ATP-dependent helicase family protein MAINTENANCE OF METHYLATION,
MORPHEUS MOLECULE, MORPHEUS
MOLECULE 1		 0.72 0.29 -0.32
60 AT1G08830 copper/zinc superoxide dismutase 1 copper/zinc superoxide dismutase 1 -0.72 0.29 -0.31
61 ATCG00120 ATP synthase subunit alpha ATP synthase subunit alpha 0.72 0.28 -0.32
62 AT2G43535 Scorpion toxin-like knottin superfamily protein -0.72 0.32 -0.32
63 AT1G04140 Transducin family protein / WD-40 repeat family protein 0.72 0.33 -0.33
64 AT1G01440 Protein of unknown function (DUF3133) 0.71 0.32 -0.3
65 AT1G02020 nitroreductase family protein 0.71 0.33 -0.31
66 AT4G28410 Tyrosine transaminase family protein -0.71 0.3 -0.31
67 ATCG00440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3
protein		 NDHC 0.71 0.31 -0.32
68 AT1G60690 NAD(P)-linked oxidoreductase superfamily protein 0.71 0.33 -0.31
69 AT2G35120 Single hybrid motif superfamily protein -0.71 0.31 -0.32
70 ATCG00340 Photosystem I, PsaA/PsaB protein PSAB 0.71 0.3 -0.32
71 AT4G18810 NAD(P)-binding Rossmann-fold superfamily protein 0.71 0.3 -0.31
72 AT5G46880 homeobox-7 homeobox-7, HOMEODOMAIN GLABROUS 5 0.7 0.31 -0.31
73 ATCG01040 Cytochrome C assembly protein YCF5 0.7 0.3 -0.32
74 AT4G03520 Thioredoxin superfamily protein ATHM2 0.7 0.34 -0.33
75 ATCG00770 ribosomal protein S8 ribosomal protein S8 0.7 0.31 -0.31
76 AT3G15520 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.7 0.33 -0.32
77 AT1G73170 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.7 0.3 -0.31
78 ATCG00540 photosynthetic electron transfer A photosynthetic electron transfer A 0.7 0.32 -0.32
79 AT5G14690 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G01516.1); Has 86 Blast hits
to 86 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 2; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.32 -0.32
80 AT4G12550 Auxin-Induced in Root cultures 1 Auxin-Induced in Root cultures 1 -0.7 0.32 -0.31
81 AT4G35850 Pentatricopeptide repeat (PPR) superfamily protein -0.7 0.31 -0.33
82 AT1G14620 decoy DECOY -0.69 0.31 -0.31
83 AT2G01140 Aldolase superfamily protein PIGMENT DEFECTIVE 345 -0.69 0.31 -0.32
84 AT4G31810 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 -0.68 0.31 -0.33
85 AT2G30130 Lateral organ boundaries (LOB) domain family protein ASL5, LBD12, PEACOCK 1 -0.68 0.31 -0.3
86 AT5G37740 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.68 0.34 -0.3
87 AT1G44970 Peroxidase superfamily protein -0.67 0.32 -0.35
88 AT3G15240 Serine/threonine-protein kinase WNK (With No
Lysine)-related		 -0.67 0.31 -0.33
89 AT1G08220 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
mitochondrial proton-transporting ATP synthase complex
assembly; LOCATED IN: mitochondrial inner membrane;
EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7
growth stages; CONTAINS InterPro DOMAIN/s: ATPase assembly
factor ATP10, mitochondria (InterPro:IPR007849); Has 168
Blast hits to 168 proteins in 86 species: Archae - 6;
Bacteria - 0; Metazoa - 2; Fungi - 107; Plants - 30;
Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).		 -0.67 0.32 -0.31
90 AT2G46740 D-arabinono-1,4-lactone oxidase family protein -0.67 0.32 -0.34
91 AT3G21710 unknown protein; Has 42 Blast hits to 42 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.67 0.33 -0.32
92 AT1G05260 Peroxidase superfamily protein RARE COLD INDUCIBLE GENE 3, RCI3A -0.66 0.3 -0.35
93 AT4G29270 HAD superfamily, subfamily IIIB acid phosphatase -0.66 0.33 -0.32
94 AT2G14900 Gibberellin-regulated family protein -0.66 0.32 -0.33
95 AT1G17060 cytochrome p450 72c1 CHIBI 2, cytochrome p450 72c1,
SHRINK 1, SUPPRESSOR OF PHYB-4 7		 -0.66 0.33 -0.33
96 AT3G46440 UDP-XYL synthase 5 UDP-XYL synthase 5 -0.66 0.32 -0.32
97 AT5G53290 cytokinin response factor 3 cytokinin response factor 3 -0.66 0.32 -0.33
98 AT1G28390 Protein kinase superfamily protein -0.66 0.31 -0.31
99 AT4G02090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: root; Has 132
Blast hits to 132 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 132; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.31 -0.31
100 AT1G11670 MATE efflux family protein -0.65 0.3 -0.31
101 AT1G08320 bZIP transcription factor family protein bZIP21, TGACG (TGA) motif-binding
protein 9		 -0.64 0.3 -0.33
102 AT1G80100 histidine phosphotransfer protein 6 histidine phosphotransfer protein
6, histidine phosphotransfer
protein 6		 -0.64 0.33 -0.33
103 AT3G11550 Uncharacterised protein family (UPF0497) Casparian strip membrane domain
protein 2		 -0.64 0.32 -0.3
104 AT1G14080 fucosyltransferase 6 ATFUT6, fucosyltransferase 6 -0.63 0.3 -0.31
105 AT4G17350 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region		 -0.63 0.32 -0.3
106 AT2G21045 Rhodanese/Cell cycle control phosphatase superfamily
protein		 -0.63 0.33 -0.3
107 AT2G38700 mevalonate diphosphate decarboxylase 1 ATMVD1, mevalonate diphosphate
decarboxylase 1		 -0.63 0.32 -0.31
108 AT1G74030 enolase 1 enolase 1 -0.63 0.3 -0.32
109 AT5G02100 Oxysterol-binding family protein OSBP(OXYSTEROL BINDING
PROTEIN)-RELATED PROTEIN 3A,
UNFERTILIZED EMBRYO SAC 18		 -0.63 0.32 -0.3
110 AT4G19185 nodulin MtN21 /EamA-like transporter family protein -0.63 0.31 -0.31
111 AT5G45920 SGNH hydrolase-type esterase superfamily protein -0.63 0.3 -0.32
112 AT1G12160 Flavin-binding monooxygenase family protein -0.63 0.31 -0.32
113 AT3G26770 NAD(P)-binding Rossmann-fold superfamily protein -0.63 0.34 -0.33
114 AT5G40510 Sucrase/ferredoxin-like family protein -0.63 0.31 -0.32
115 AT1G67030 zinc finger protein 6 zinc finger protein 6 -0.62 0.32 -0.31
116 AT5G12410 THUMP domain-containing protein -0.62 0.32 -0.32
117 AT4G30170 Peroxidase family protein -0.62 0.3 -0.33
118 AT2G41660 Protein of unknown function, DUF617 mizu-kussei 1 -0.62 0.33 -0.32
119 AT5G44710 CONTAINS InterPro DOMAIN/s: Ribosomal protein S27/S33,
mitochondrial (InterPro:IPR013219); Has 101 Blast hits to
101 proteins in 55 species: Archae - 0; Bacteria - 0;
Metazoa - 8; Fungi - 59; Plants - 26; Viruses - 0; Other
Eukaryotes - 8 (source: NCBI BLink).		 -0.62 0.33 -0.31
120 AT5G22790 reticulata-related 1 reticulata-related 1 -0.62 0.32 -0.32
121 AT3G12700 Eukaryotic aspartyl protease family protein -0.62 0.3 -0.31
122 AT2G46140 Late embryogenesis abundant protein -0.62 0.34 -0.31
123 AT5G60950 COBRA-like protein 5 precursor COBRA-like protein 5 precursor -0.61 0.3 -0.3
124 AT5G49210 unknown protein; Has 3675 Blast hits to 2315 proteins in
312 species: Archae - 2; Bacteria - 342; Metazoa - 1190;
Fungi - 281; Plants - 114; Viruses - 4; Other Eukaryotes -
1742 (source: NCBI BLink).		 -0.61 0.32 -0.33
125 AT2G47460 myb domain protein 12 MYB DOMAIN PROTEIN 12, myb domain
protein 12, PRODUCTION OF FLAVONOL
GLYCOSIDES 1		 -0.61 0.32 -0.32
126 AT4G11880 AGAMOUS-like 14 AGAMOUS-like 14 -0.61 0.32 -0.32
127 AT3G59220 pirin ATPIRIN1, pirin, PRN1 -0.61 0.33 -0.32
128 AT4G14695 Uncharacterised protein family (UPF0041) -0.61 0.32 -0.3
129 AT1G76090 sterol methyltransferase 3 sterol methyltransferase 3 -0.61 0.33 -0.32
130 AT5G13520 peptidase M1 family protein -0.6 0.34 -0.31
131 AT1G12740 cytochrome P450, family 87, subfamily A, polypeptide 2 cytochrome P450, family 87,
subfamily A, polypeptide 2		 -0.6 0.29 -0.31
132 AT5G57620 myb domain protein 36 myb domain protein 36, myb domain
protein 36		 -0.6 0.31 -0.3
133 AT5G60760 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.59 0.31 -0.32
134 AT2G21850 Cysteine/Histidine-rich C1 domain family protein -0.59 0.32 -0.32
135 AT5G10720 histidine kinase 5 histidine kinase 5, CYTOKININ
INDEPENDENT 2, histidine kinase 5		 -0.59 0.33 -0.32
136 AT2G45400 NAD(P)-binding Rossmann-fold superfamily protein BEN1 -0.59 0.3 -0.34
137 AT3G12090 tetraspanin6 tetraspanin6 -0.59 0.33 -0.3
138 AT5G63660 Scorpion toxin-like knottin superfamily protein LOW-MOLECULAR-WEIGHT CYSTEINE-RICH
74, PDF2.5		 -0.59 0.29 -0.32
139 AT5G14020 Endosomal targeting BRO1-like domain-containing protein -0.59 0.32 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
140 C0133 Kaempferol-3,7-O-α-dirhamnopyranoside Kaempferol-3,7-O-α-L-dirhamnopyranoside Kaempferol-3-rhamnoside-7-rhamnoside kaempferol glucoside biosynthesis (Arabidopsis) 0.87 0.42 -0.43 C0133
141 C0103 Glutaric acid - - - -0.69 0.48 -0.43