ATCG00580 : photosystem II reaction center protein E
Query Information
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AGICode ATCG00580
Description photosystem II reaction center protein E
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 ATCG00580 photosystem II reaction center protein E photosystem II reaction center
protein E		 1 0.35 -0.3
2 ATCG00570 photosystem II reaction center protein F photosystem II reaction center
protein F		 0.9 0.32 -0.31
3 ATCG00560 photosystem II reaction center protein L photosystem II reaction center
protein L		 0.85 0.32 -0.3
4 ATCG00550 photosystem II reaction center protein J photosystem II reaction center
protein J		 0.81 0.29 -0.32
5 AT1G53210 sodium/calcium exchanger family protein / calcium-binding
EF hand family protein		 0.79 0.29 -0.32
6 AT3G20930 RNA-binding (RRM/RBD/RNP motifs) family protein 0.79 0.32 -0.32
7 AT4G33510 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase 3-deoxy-d-arabino-heptulosonate
7-phosphate synthase		 0.76 0.31 -0.31
8 AT3G05350 Metallopeptidase M24 family protein 0.74 0.31 -0.32
9 AT3G17420 glyoxysomal protein kinase 1 glyoxysomal protein kinase 1 -0.73 0.32 -0.32
10 AT1G29700 Metallo-hydrolase/oxidoreductase superfamily protein 0.73 0.33 -0.31
11 AT3G01370 CRM family member 2 Arabidopsis thaliana CRM family
member 2, CRM family member 2		 0.73 0.3 -0.33
12 AT5G04900 NYC1-like NYC1-like 0.73 0.32 -0.31
13 AT1G24040 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.72 0.32 -0.31
14 AT2G35270 Predicted AT-hook DNA-binding family protein GIANT KILLER -0.72 0.31 -0.3
15 AT1G67830 alpha-fucosidase 1 Arabidopsis thaliana
alpha-fucosidase 1,
alpha-fucosidase 1		 0.72 0.32 -0.31
16 AT4G20030 RNA-binding (RRM/RBD/RNP motifs) family protein 0.71 0.3 -0.3
17 AT5G14460 Pseudouridine synthase family protein 0.7 0.33 -0.31
18 AT2G37130 Peroxidase superfamily protein -0.7 0.3 -0.32
19 AT1G15180 MATE efflux family protein 0.7 0.33 -0.32
20 AT2G45620 Nucleotidyltransferase family protein 0.7 0.31 -0.35
21 AT1G02020 nitroreductase family protein 0.69 0.32 -0.31
22 ATCG00530 CemA-like proton extrusion protein-related YCF10 0.69 0.32 -0.31
23 AT4G12550 Auxin-Induced in Root cultures 1 Auxin-Induced in Root cultures 1 -0.69 0.29 -0.33
24 AT1G08830 copper/zinc superoxide dismutase 1 copper/zinc superoxide dismutase 1 -0.69 0.29 -0.32
25 AT4G18600 SCAR family protein WASP (WISKOTT-ALDRICH SYNDROME
PROTEIN)-FAMILY VERPROLIN
HOMOLOGOUS PROTEIN 5, SCARL, WAVE5		 0.68 0.33 -0.31
26 AT4G28760 Protein of unknown function (DUF3741) 0.68 0.3 -0.32
27 AT1G25290 RHOMBOID-like protein 10 RHOMBOID-like protein 10,
RHOMBOID-like protein 10		 0.68 0.31 -0.3
28 AT1G60690 NAD(P)-linked oxidoreductase superfamily protein 0.68 0.31 -0.31
29 ATCG00760 ribosomal protein L36 ribosomal protein L36 0.68 0.29 -0.32
30 AT4G39820 Tetratricopeptide repeat (TPR)-like superfamily protein -0.68 0.3 -0.31
31 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.68 0.31 -0.32
32 AT4G31810 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 -0.67 0.3 -0.33
33 AT5G07890 myosin heavy chain-related 0.67 0.31 -0.33
34 AT1G50250 FTSH protease 1 FTSH protease 1 0.67 0.3 -0.32
35 AT1G08220 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
mitochondrial proton-transporting ATP synthase complex
assembly; LOCATED IN: mitochondrial inner membrane;
EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7
growth stages; CONTAINS InterPro DOMAIN/s: ATPase assembly
factor ATP10, mitochondria (InterPro:IPR007849); Has 168
Blast hits to 168 proteins in 86 species: Archae - 6;
Bacteria - 0; Metazoa - 2; Fungi - 107; Plants - 30;
Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).		 -0.66 0.29 -0.3
36 AT3G13860 heat shock protein 60-3A heat shock protein 60-3A -0.66 0.36 -0.32
37 ATCG00770 ribosomal protein S8 ribosomal protein S8 0.66 0.31 -0.32
38 AT3G49320 Metal-dependent protein hydrolase -0.66 0.32 -0.32
39 AT5G02050 Mitochondrial glycoprotein family protein -0.66 0.32 -0.29
40 ATCG01090 NADPH dehydrogenases NDHI 0.66 0.3 -0.31
41 AT5G24490 30S ribosomal protein, putative 0.66 0.28 -0.33
42 AT3G46440 UDP-XYL synthase 5 UDP-XYL synthase 5 -0.66 0.31 -0.3
43 AT1G01440 Protein of unknown function (DUF3133) 0.65 0.31 -0.32
44 ATCG01100 NADH dehydrogenase family protein NDHA 0.65 0.31 -0.31
45 AT5G25140 cytochrome P450, family 71, subfamily B, polypeptide 13 cytochrome P450, family 71,
subfamily B, polypeptide 13		 -0.65 0.33 -0.3
46 AT1G30890 Integral membrane HRF1 family protein -0.65 0.29 -0.3
47 AT1G49390 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.65 0.31 -0.31
48 ATCG00750 ribosomal protein S11 ribosomal protein S11 0.65 0.31 -0.3
49 AT2G42570 TRICHOME BIREFRINGENCE-LIKE 39 TRICHOME BIREFRINGENCE-LIKE 39 -0.65 0.31 -0.32
50 AT5G61030 glycine-rich RNA-binding protein 3 glycine-rich RNA-binding protein 3 -0.65 0.31 -0.31
51 AT2G17970 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.65 0.3 -0.29
52 AT1G08060 ATP-dependent helicase family protein MAINTENANCE OF METHYLATION,
MORPHEUS MOLECULE, MORPHEUS
MOLECULE 1		 0.65 0.33 -0.3
53 AT5G22790 reticulata-related 1 reticulata-related 1 -0.65 0.31 -0.33
54 ATCG00080 photosystem II reaction center protein I photosystem II reaction center
protein I		 0.65 0.31 -0.32
55 AT5G07960 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0139
(InterPro:IPR005351); Has 193 Blast hits to 193 proteins in
75 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi
- 0; Plants - 52; Viruses - 0; Other Eukaryotes - 11
(source: NCBI BLink).		 -0.65 0.32 -0.31
56 AT1G32360 Zinc finger (CCCH-type) family protein 0.64 0.32 -0.32
57 AT3G14290 20S proteasome alpha subunit E2 20S proteasome alpha subunit E2 -0.64 0.28 -0.31
58 ATCG00340 Photosystem I, PsaA/PsaB protein PSAB 0.64 0.3 -0.31
59 AT1G09010 glycoside hydrolase family 2 protein 0.64 0.32 -0.31
60 AT1G62790 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.63 0.32 -0.28
61 AT2G25080 glutathione peroxidase 1 GLUTATHIONE PEROXIDASE 1,
glutathione peroxidase 1		 0.63 0.33 -0.35
62 AT2G43880 Pectin lyase-like superfamily protein -0.63 0.32 -0.33
63 ATCG00440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3
protein		 NDHC 0.63 0.32 -0.34
64 AT1G68490 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast
hits to 125 proteins in 18 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.31 -0.3
65 AT2G36120 Glycine-rich protein family DEFECTIVELY ORGANIZED TRIBUTARIES
1		 -0.63 0.32 -0.33
66 AT1G53670 methionine sulfoxide reductase B 1 ATMSRB1, methionine sulfoxide
reductase B 1		 0.63 0.31 -0.32
67 AT5G24080 Protein kinase superfamily protein 0.63 0.3 -0.3
68 AT5G14105 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.63 0.35 -0.31
69 AT2G22475 GRAM domain family protein GL2-EXPRESSION MODULATOR -0.63 0.33 -0.33
70 AT5G53290 cytokinin response factor 3 cytokinin response factor 3 -0.63 0.31 -0.31
71 ATCG00120 ATP synthase subunit alpha ATP synthase subunit alpha 0.63 0.32 -0.29
72 AT4G14695 Uncharacterised protein family (UPF0041) -0.63 0.34 -0.32
73 AT1G27435 unknown protein; Has 16 Blast hits to 16 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.63 0.31 -0.34
74 AT2G30950 FtsH extracellular protease family FTSH2, VARIEGATED 2 0.62 0.31 -0.31
75 AT1G20270 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.62 0.31 -0.32
76 AT5G03130 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.62 0.31 -0.3
77 AT1G03070 Bax inhibitor-1 family protein 0.62 0.31 -0.32
78 AT5G04870 calcium dependent protein kinase 1 ATCPK1, calcium dependent protein
kinase 1		 -0.62 0.31 -0.3
79 AT4G01790 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.62 0.31 -0.33
80 AT1G63960 Copper transport protein family 0.62 0.32 -0.33
81 AT4G35850 Pentatricopeptide repeat (PPR) superfamily protein -0.62 0.3 -0.31
82 AT5G26190 Cysteine/Histidine-rich C1 domain family protein 0.62 0.3 -0.29
83 AT5G52460 FBD, F-box and Leucine Rich Repeat domains containing
protein		 embryo sac development arrest 41 0.62 0.3 -0.31
84 AT5G06530 ABC-2 type transporter family protein ATP-binding cassette G22,
Arabidopsis thaliana ATP-binding
cassette G22		 0.61 0.29 -0.33
85 AT2G43600 Chitinase family protein -0.61 0.33 -0.33
86 ATCG00280 photosystem II reaction center protein C photosystem II reaction center
protein C		 0.61 0.3 -0.32
87 AT2G37020 Translin family protein -0.61 0.3 -0.34
88 AT2G45550 cytochrome P450, family 76, subfamily C, polypeptide 4 cytochrome P450, family 76,
subfamily C, polypeptide 4		 0.61 0.32 -0.33
89 AT4G19185 nodulin MtN21 /EamA-like transporter family protein -0.61 0.29 -0.3
90 AT3G26310 cytochrome P450, family 71, subfamily B, polypeptide 35 cytochrome P450, family 71,
subfamily B, polypeptide 35		 0.61 0.33 -0.32
91 AT3G55480 protein affected trafficking 2 beta-subunit of adaptor protein
complex 3, protein affected
trafficking 2		 0.61 0.31 -0.34
92 AT1G14080 fucosyltransferase 6 ATFUT6, fucosyltransferase 6 -0.6 0.3 -0.34
93 AT5G39580 Peroxidase superfamily protein -0.6 0.31 -0.33
94 AT4G01100 adenine nucleotide transporter 1 adenine nucleotide transporter 1 -0.6 0.34 -0.31
95 AT2G01800 COP1-interacting protein-related -0.6 0.34 -0.3
96 AT2G10020 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.3 -0.34
97 AT2G36320 A20/AN1-like zinc finger family protein -0.59 0.32 -0.31
98 AT1G73340 Cytochrome P450 superfamily protein -0.59 0.34 -0.32
99 AT3G53880 NAD(P)-linked oxidoreductase superfamily protein Aldo-keto reductase family 4
member C11		 -0.58 0.31 -0.32
100 AT5G49210 unknown protein; Has 3675 Blast hits to 2315 proteins in
312 species: Archae - 2; Bacteria - 342; Metazoa - 1190;
Fungi - 281; Plants - 114; Viruses - 4; Other Eukaryotes -
1742 (source: NCBI BLink).		 -0.58 0.31 -0.32
101 AT5G64120 Peroxidase superfamily protein -0.58 0.33 -0.31
102 AT1G79890 RAD3-like DNA-binding helicase protein -0.58 0.31 -0.32
103 AT5G10430 arabinogalactan protein 4 arabinogalactan protein 4, ATAGP4 -0.58 0.31 -0.32
104 AT5G58590 RAN binding protein 1 RAN binding protein 1 -0.58 0.31 -0.31
105 AT1G64220 translocase of outer membrane 7 kDa subunit 2 translocase of outer membrane 7
kDa subunit 2		 -0.58 0.34 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
106 C0079 Digalactosyldiacylglycerol-34:5 - Digalactosyldiacylglycerol-34:5 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.69 0.44 -0.45 C0079