AGICode | ATCG00660 |
Description | ribosomal protein L20 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | ATCG00660 | ribosomal protein L20 | ribosomal protein L20 | 1 | 0.3 | -0.33 | ||
2 | ATCG00730 | photosynthetic electron transfer D | photosynthetic electron transfer D | 0.82 | 0.32 | -0.31 | ||
3 | ATCG01070 | NADH-ubiquinone/plastoquinone oxidoreductase chain 4L | NDHE | 0.81 | 0.3 | -0.33 | ||
4 | ATCG00360 | Tetratricopeptide repeat (TPR)-like superfamily protein | YCF3 | 0.81 | 0.29 | -0.3 | ||
5 | ATCG01080 | NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 | NDHG | 0.79 | 0.34 | -0.32 | ||
6 | ATCG01120 | chloroplast ribosomal protein S15 | chloroplast ribosomal protein S15 | 0.78 | 0.33 | -0.34 | ||
7 | ATCG00510 | photsystem I subunit I | photsystem I subunit I | 0.78 | 0.32 | -0.32 | ||
8 | ATCG00330 | chloroplast ribosomal protein S14 | chloroplast ribosomal protein S14 | 0.77 | 0.32 | -0.29 | ||
9 | ATCG00780 | ribosomal protein L14 | ribosomal protein L14 | 0.74 | 0.31 | -0.31 | ||
10 | ATCG00600 | PETG | PETG | 0.73 | 0.34 | -0.3 | ||
11 | ATCG00700 | photosystem II reaction center protein N | photosystem II reaction center protein N |
0.73 | 0.33 | -0.31 | ||
12 | ATCG00160 | ribosomal protein S2 | ribosomal protein S2 | 0.73 | 0.33 | -0.3 | ||
13 | ATCG00380 | chloroplast ribosomal protein S4 | chloroplast ribosomal protein S4 | 0.73 | 0.33 | -0.34 | ||
14 | ATCG00790 | ribosomal protein L16 | ribosomal protein L16 | 0.72 | 0.29 | -0.32 | ||
15 | ATCG00520 | unfolded protein binding | YCF4 | 0.72 | 0.33 | -0.3 | ||
16 | ATCG00170 | DNA-directed RNA polymerase family protein | RPOC2 | 0.71 | 0.31 | -0.32 | ||
17 | ATCG00590 | electron carriers | ORF31 | 0.71 | 0.32 | -0.31 | ||
18 | ATCG00690 | photosystem II reaction center protein T | photosystem II reaction center protein T, PSBTC |
0.7 | 0.32 | -0.3 | ||
19 | ATCG00420 | NADH dehydrogenase subunit J | NADH dehydrogenase subunit J | 0.69 | 0.32 | -0.34 | ||
20 | ATCG01050 | NADH-Ubiquinone/plastoquinone (complex I) protein | NDHD | 0.69 | 0.32 | -0.32 | ||
21 | ATCG00150 | ATPase, F0 complex, subunit A protein | ATPI | 0.69 | 0.3 | -0.33 | ||
22 | ATCG00120 | ATP synthase subunit alpha | ATP synthase subunit alpha | 0.69 | 0.31 | -0.34 | ||
23 | ATCG00180 | DNA-directed RNA polymerase family protein | RPOC1 | 0.68 | 0.3 | -0.33 | ||
24 | AT5G13950 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02290.1); Has 147 Blast hits to 145 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 56; Fungi - 6; Plants - 81; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.67 | 0.32 | -0.3 | |||
25 | ATCG00490 | ribulose-bisphosphate carboxylases | RBCL | 0.67 | 0.3 | -0.32 | ||
26 | ATCG00210 | electron transporter, transferring electrons within cytochrome b6/f complex of photosystem IIs |
YCF6 | 0.67 | 0.32 | -0.33 | ||
27 | AT3G55480 | protein affected trafficking 2 | beta-subunit of adaptor protein complex 3, protein affected trafficking 2 |
0.67 | 0.31 | -0.29 | ||
28 | ATCG01100 | NADH dehydrogenase family protein | NDHA | 0.66 | 0.31 | -0.29 | ||
29 | ATCG00530 | CemA-like proton extrusion protein-related | YCF10 | 0.66 | 0.33 | -0.34 | ||
30 | ATCG00270 | photosystem II reaction center protein D | photosystem II reaction center protein D |
0.66 | 0.3 | -0.31 | ||
31 | ATCG01060 | iron-sulfur cluster binding;electron carriers;4 iron, 4 sulfur cluster binding |
PSAC | 0.65 | 0.31 | -0.31 | ||
32 | ATCG00670 | plastid-encoded CLP P | CASEINOLYTIC PROTEASE P 1, plastid-encoded CLP P |
0.65 | 0.33 | -0.32 | ||
33 | ATCG00300 | YCF9 | YCF9 | 0.65 | 0.32 | -0.31 | ||
34 | AT1G12990 | beta-1,4-N-acetylglucosaminyltransferase family protein | 0.64 | 0.31 | -0.31 | |||
35 | ATCG00430 | photosystem II reaction center protein G | photosystem II reaction center protein G |
0.64 | 0.31 | -0.32 | ||
36 | ATCG00190 | RNA polymerase subunit beta | RNA polymerase subunit beta | 0.64 | 0.31 | -0.32 | ||
37 | ATCG00500 | acetyl-CoA carboxylase carboxyl transferase subunit beta | acetyl-CoA carboxylase carboxyl transferase subunit beta |
0.64 | 0.31 | -0.3 | ||
38 | ATCG01110 | NAD(P)H dehydrogenase subunit H | NAD(P)H dehydrogenase subunit H | 0.64 | 0.3 | -0.32 | ||
39 | AT5G53990 | UDP-Glycosyltransferase superfamily protein | -0.64 | 0.33 | -0.32 | |||
40 | ATCG01090 | NADPH dehydrogenases | NDHI | 0.63 | 0.32 | -0.32 | ||
41 | ATCG00040 | maturase K | maturase K | 0.63 | 0.32 | -0.34 | ||
42 | AT1G17970 | RING/U-box superfamily protein | 0.62 | 0.32 | -0.32 | |||
43 | ATCG00340 | Photosystem I, PsaA/PsaB protein | PSAB | 0.62 | 0.33 | -0.32 | ||
44 | AT5G26760 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.62 | 0.3 | -0.32 | |||
45 | AT1G74030 | enolase 1 | enolase 1 | -0.61 | 0.32 | -0.3 | ||
46 | AT1G10990 | unknown protein; Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.61 | 0.32 | -0.32 | |||
47 | AT1G03770 | RING 1B | ARABIDOPSIS THALIANA RING 1B, RING 1B |
-0.6 | 0.32 | -0.31 | ||
48 | ATCG00710 | photosystem II reaction center protein H | photosystem II reaction center protein H |
0.6 | 0.32 | -0.3 | ||
49 | AT1G12820 | auxin signaling F-box 3 | auxin signaling F-box 3 | 0.59 | 0.3 | -0.31 | ||
50 | AT5G26260 | TRAF-like family protein | -0.59 | 0.3 | -0.3 | |||
51 | AT3G09370 | myb domain protein 3r-3 | myb domain protein 3R3, myb domain protein 3r-3 |
0.59 | 0.33 | -0.33 | ||
52 | AT4G16950 | Disease resistance protein (TIR-NBS-LRR class) family | RECOGNITION OF PERONOSPORA PARASITICA 5 |
0.59 | 0.3 | -0.33 | ||
53 | AT5G62260 | AT hook motif DNA-binding family protein | -0.58 | 0.3 | -0.33 | |||
54 | ATCG00140 | ATP synthase subunit C family protein | ATPH | 0.58 | 0.32 | -0.31 | ||
55 | AT2G46850 | Protein kinase superfamily protein | -0.58 | 0.37 | -0.31 | |||
56 | AT4G00110 | UDP-D-glucuronate 4-epimerase 3 | UDP-D-glucuronate 4-epimerase 3 | -0.58 | 0.3 | -0.3 | ||
57 | AT2G28540 | RNA binding (RRM/RBD/RNP motifs) family protein | 0.57 | 0.31 | -0.33 | |||
58 | AT3G20370 | TRAF-like family protein | -0.57 | 0.31 | -0.32 | |||
59 | AT3G55400 | methionyl-tRNA synthetase / methionine--tRNA ligase / MetRS (cpMetRS) |
OVULE ABORTION 1 | 0.57 | 0.31 | -0.3 | ||
60 | AT2G14100 | cytochrome P450, family 705, subfamily A, polypeptide 13 | cytochrome P450, family 705, subfamily A, polypeptide 13 |
-0.57 | 0.32 | -0.29 | ||
61 | AT4G25520 | SEUSS-like 1 | SEUSS-like 1 | 0.57 | 0.31 | -0.34 | ||
62 | AT3G06870 | proline-rich family protein | 0.57 | 0.31 | -0.32 | |||
63 | AT1G05540 | Protein of unknown function (DUF295) | 0.56 | 0.34 | -0.3 | |||
64 | AT2G44450 | beta glucosidase 15 | beta glucosidase 15 | -0.56 | 0.33 | -0.32 | ||
65 | ATCG00130 | ATPase, F0 complex, subunit B/B', bacterial/chloroplast | ATPF | 0.56 | 0.3 | -0.32 | ||
66 | AT2G03830 | Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). |
root meristem growth factor 8 | -0.55 | 0.3 | -0.32 | ||
67 | AT5G47460 | Pentatricopeptide repeat (PPR) superfamily protein | 0.55 | 0.33 | -0.34 | |||
68 | AT1G76880 | Duplicated homeodomain-like superfamily protein | 0.55 | 0.3 | -0.33 | |||
69 | AT5G48100 | Laccase/Diphenol oxidase family protein | ATLAC15, LACCASE-LIKE 15, TRANSPARENT TESTA 10 |
-0.54 | 0.29 | -0.31 | ||
70 | AT2G36120 | Glycine-rich protein family | DEFECTIVELY ORGANIZED TRIBUTARIES 1 |
-0.54 | 0.32 | -0.31 | ||
71 | AT3G27340 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 1035 Blast hits to 1035 proteins in 399 species: Archae - 0; Bacteria - 765; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink). |
-0.54 | 0.33 | -0.31 | |||
72 | AT5G48000 | cytochrome P450, family 708, subfamily A, polypeptide 2 | CYTOCHROME P450, FAMILY 708, SUBFAMILY A, POLYPEPTIDE 2, cytochrome P450, family 708, subfamily A, polypeptide 2, THALIANOL HYDROXYLASE, THALIANOL HYDROXYLASE 1 |
-0.53 | 0.3 | -0.34 | ||
73 | AT2G32000 | DNA topoisomerase, type IA, core | 0.53 | 0.33 | -0.31 | |||
74 | AT1G68580 | agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein |
0.53 | 0.33 | -0.35 | |||
75 | AT1G21580 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.53 | 0.31 | -0.29 | |||
76 | AT1G14680 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09060.1); Has 8132 Blast hits to 6366 proteins in 685 species: Archae - 171; Bacteria - 671; Metazoa - 4046; Fungi - 445; Plants - 318; Viruses - 23; Other Eukaryotes - 2458 (source: NCBI BLink). |
0.53 | 0.33 | -0.33 | |||
77 | AT2G27320 | Protein of Unknown Function (DUF239) | 0.52 | 0.33 | -0.32 | |||
78 | AT3G24715 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain |
0.52 | 0.32 | -0.32 | |||
79 | AT3G12550 | XH/XS domain-containing protein | factor of DNA methylation 3 | 0.52 | 0.32 | -0.32 | ||
80 | AT5G38195 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.5 | 0.32 | -0.32 | |||
81 | AT1G26870 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein |
Arabidopsis NAC domain containing protein 9, FEZ |
-0.49 | 0.34 | -0.31 | ||
82 | AT2G27900 | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 316 Blast hits to 252 proteins in 92 species: Archae - 0; Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). |
-0.48 | 0.34 | -0.3 |