AGICode | ATCG00670 |
Description | plastid-encoded CLP P |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | ATCG00670 | plastid-encoded CLP P | CASEINOLYTIC PROTEASE P 1, plastid-encoded CLP P |
1 | 0.3 | -0.32 | ||
2 | ATCG00470 | ATP synthase epsilon chain | ATP synthase epsilon chain | 0.84 | 0.32 | -0.3 | ||
3 | ATCG01050 | NADH-Ubiquinone/plastoquinone (complex I) protein | NDHD | 0.82 | 0.31 | -0.33 | ||
4 | ATCG00120 | ATP synthase subunit alpha | ATP synthase subunit alpha | 0.82 | 0.31 | -0.32 | ||
5 | ATCG00480 | ATP synthase subunit beta | ATP synthase subunit beta, ATP synthase subunit beta |
0.81 | 0.31 | -0.32 | ||
6 | ATCG00510 | photsystem I subunit I | photsystem I subunit I | 0.81 | 0.33 | -0.29 | ||
7 | ATCG00720 | photosynthetic electron transfer B | photosynthetic electron transfer B | 0.8 | 0.35 | -0.3 | ||
8 | ATCG00160 | ribosomal protein S2 | ribosomal protein S2 | 0.8 | 0.31 | -0.31 | ||
9 | ATCG00300 | YCF9 | YCF9 | 0.8 | 0.34 | -0.31 | ||
10 | ATCG01090 | NADPH dehydrogenases | NDHI | 0.79 | 0.32 | -0.32 | ||
11 | ATCG00340 | Photosystem I, PsaA/PsaB protein | PSAB | 0.79 | 0.32 | -0.34 | ||
12 | ATCG00040 | maturase K | maturase K | 0.79 | 0.31 | -0.31 | ||
13 | ATCG00520 | unfolded protein binding | YCF4 | 0.79 | 0.31 | -0.32 | ||
14 | ATCG00050 | ribosomal protein S16 | ribosomal protein S16 | 0.78 | 0.34 | -0.33 | ||
15 | ATCG01120 | chloroplast ribosomal protein S15 | chloroplast ribosomal protein S15 | 0.78 | 0.3 | -0.32 | ||
16 | ATCG01040 | Cytochrome C assembly protein | YCF5 | 0.77 | 0.31 | -0.33 | ||
17 | ATCG01100 | NADH dehydrogenase family protein | NDHA | 0.76 | 0.34 | -0.33 | ||
18 | ATCG00820 | ribosomal protein S19 | ribosomal protein S19 | 0.76 | 0.3 | -0.32 | ||
19 | ATCG00530 | CemA-like proton extrusion protein-related | YCF10 | 0.76 | 0.31 | -0.3 | ||
20 | AT5G23830 | MD-2-related lipid recognition domain-containing protein | -0.75 | 0.33 | -0.32 | |||
21 | ATCG00280 | photosystem II reaction center protein C | photosystem II reaction center protein C |
0.75 | 0.32 | -0.31 | ||
22 | ATCG00710 | photosystem II reaction center protein H | photosystem II reaction center protein H |
0.75 | 0.3 | -0.28 | ||
23 | ATCG00540 | photosynthetic electron transfer A | photosynthetic electron transfer A | 0.75 | 0.31 | -0.3 | ||
24 | ATCG00180 | DNA-directed RNA polymerase family protein | RPOC1 | 0.74 | 0.33 | -0.32 | ||
25 | ATCG00270 | photosystem II reaction center protein D | photosystem II reaction center protein D |
0.74 | 0.31 | -0.31 | ||
26 | ATCG00790 | ribosomal protein L16 | ribosomal protein L16 | 0.73 | 0.3 | -0.32 | ||
27 | ATCG00170 | DNA-directed RNA polymerase family protein | RPOC2 | 0.73 | 0.32 | -0.3 | ||
28 | AT1G70690 | Receptor-like protein kinase-related family protein | HOPW1-1-INDUCED GENE1, PLASMODESMATA-LOCATED PROTEIN 5 |
-0.72 | 0.31 | -0.3 | ||
29 | ATCG00440 | NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein |
NDHC | 0.72 | 0.29 | -0.31 | ||
30 | ATCG01110 | NAD(P)H dehydrogenase subunit H | NAD(P)H dehydrogenase subunit H | 0.72 | 0.33 | -0.32 | ||
31 | ATCG00380 | chloroplast ribosomal protein S4 | chloroplast ribosomal protein S4 | 0.72 | 0.31 | -0.3 | ||
32 | ATCG00600 | PETG | PETG | 0.71 | 0.33 | -0.33 | ||
33 | ATCG00360 | Tetratricopeptide repeat (TPR)-like superfamily protein | YCF3 | 0.71 | 0.32 | -0.31 | ||
34 | AT4G37410 | cytochrome P450, family 81, subfamily F, polypeptide 4 | cytochrome P450, family 81, subfamily F, polypeptide 4 |
-0.7 | 0.31 | -0.31 | ||
35 | AT3G55480 | protein affected trafficking 2 | beta-subunit of adaptor protein complex 3, protein affected trafficking 2 |
0.7 | 0.34 | -0.33 | ||
36 | ATCG00630 | PSAJ | PSAJ | 0.69 | 0.32 | -0.3 | ||
37 | ATCG01060 | iron-sulfur cluster binding;electron carriers;4 iron, 4 sulfur cluster binding |
PSAC | 0.69 | 0.33 | -0.32 | ||
38 | AT5G38020 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.69 | 0.3 | -0.31 | |||
39 | ATCG00420 | NADH dehydrogenase subunit J | NADH dehydrogenase subunit J | 0.69 | 0.31 | -0.31 | ||
40 | AT1G53210 | sodium/calcium exchanger family protein / calcium-binding EF hand family protein |
0.68 | 0.32 | -0.3 | |||
41 | AT1G80830 | natural resistance-associated macrophage protein 1 | ATNRAMP1, natural resistance-associated macrophage protein 1, PMIT1 |
-0.68 | 0.32 | -0.32 | ||
42 | AT4G29270 | HAD superfamily, subfamily IIIB acid phosphatase | -0.68 | 0.35 | -0.32 | |||
43 | AT5G48000 | cytochrome P450, family 708, subfamily A, polypeptide 2 | CYTOCHROME P450, FAMILY 708, SUBFAMILY A, POLYPEPTIDE 2, cytochrome P450, family 708, subfamily A, polypeptide 2, THALIANOL HYDROXYLASE, THALIANOL HYDROXYLASE 1 |
-0.67 | 0.3 | -0.32 | ||
44 | ATCG00590 | electron carriers | ORF31 | 0.67 | 0.32 | -0.31 | ||
45 | ATCG00430 | photosystem II reaction center protein G | photosystem II reaction center protein G |
0.67 | 0.32 | -0.32 | ||
46 | AT3G51490 | tonoplast monosaccharide transporter3 | tonoplast monosaccharide transporter3 |
0.67 | 0.32 | -0.3 | ||
47 | ATCG00750 | ribosomal protein S11 | ribosomal protein S11 | 0.67 | 0.32 | -0.3 | ||
48 | AT4G38180 | FAR1-related sequence 5 | FAR1-related sequence 5 | 0.66 | 0.32 | -0.32 | ||
49 | ATCG00490 | ribulose-bisphosphate carboxylases | RBCL | 0.66 | 0.3 | -0.32 | ||
50 | AT4G22610 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.66 | 0.32 | -0.32 | |||
51 | AT1G10990 | unknown protein; Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.66 | 0.31 | -0.31 | |||
52 | ATCG00130 | ATPase, F0 complex, subunit B/B', bacterial/chloroplast | ATPF | 0.66 | 0.31 | -0.31 | ||
53 | AT4G09640 | Protein of unknown function (DUF803) | 0.65 | 0.33 | -0.31 | |||
54 | ATCG00740 | RNA polymerase subunit alpha | RNA polymerase subunit alpha | 0.65 | 0.3 | -0.32 | ||
55 | ATCG00800 | structural constituent of ribosome | 0.65 | 0.33 | -0.33 | |||
56 | ATCG00140 | ATP synthase subunit C family protein | ATPH | 0.65 | 0.31 | -0.33 | ||
57 | AT2G38700 | mevalonate diphosphate decarboxylase 1 | ATMVD1, mevalonate diphosphate decarboxylase 1 |
-0.65 | 0.31 | -0.32 | ||
58 | ATCG00660 | ribosomal protein L20 | ribosomal protein L20 | 0.65 | 0.32 | -0.33 | ||
59 | AT4G25580 | CAP160 protein | 0.65 | 0.3 | -0.3 | |||
60 | AT5G13950 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02290.1); Has 147 Blast hits to 145 proteins in 44 species: Archae - 0; Bacteria - 2; Metazoa - 56; Fungi - 6; Plants - 81; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.64 | 0.29 | -0.3 | |||
61 | AT1G17860 | Kunitz family trypsin and protease inhibitor protein | -0.64 | 0.31 | -0.3 | |||
62 | ATCG00700 | photosystem II reaction center protein N | photosystem II reaction center protein N |
0.64 | 0.31 | -0.32 | ||
63 | AT4G12550 | Auxin-Induced in Root cultures 1 | Auxin-Induced in Root cultures 1 | -0.64 | 0.34 | -0.29 | ||
64 | ATCG00500 | acetyl-CoA carboxylase carboxyl transferase subunit beta | acetyl-CoA carboxylase carboxyl transferase subunit beta |
0.64 | 0.32 | -0.31 | ||
65 | AT1G36030 | F-box family protein | 0.64 | 0.32 | -0.29 | |||
66 | AT5G02100 | Oxysterol-binding family protein | OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3A, UNFERTILIZED EMBRYO SAC 18 |
-0.63 | 0.31 | -0.31 | ||
67 | AT2G18620 | Terpenoid synthases superfamily protein | -0.63 | 0.32 | -0.31 | |||
68 | AT5G37990 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.63 | 0.32 | -0.32 | |||
69 | AT2G01530 | MLP-like protein 329 | MLP-like protein 329, (Zusammen-CA)-enhanced 2 |
-0.63 | 0.31 | -0.31 | ||
70 | AT5G48010 | thalianol synthase 1 | Arabidopsis thaliana thalianol synthase 1, THALIANOL SYNTHASE, thalianol synthase 1 |
-0.62 | 0.31 | -0.32 | ||
71 | AT3G29250 | NAD(P)-binding Rossmann-fold superfamily protein | AtSDR4, short-chain dehydrogenase reductase 4 |
-0.61 | 0.34 | -0.33 | ||
72 | AT4G00110 | UDP-D-glucuronate 4-epimerase 3 | UDP-D-glucuronate 4-epimerase 3 | -0.61 | 0.31 | -0.32 | ||
73 | AT5G47990 | cytochrome P450, family 705, subfamily A, polypeptide 5 | cytochrome P450, family 705, subfamily A, polypeptide 5, THALIAN-DIOL DESATURASE, THALIAN-DIOL DESATURASE |
-0.61 | 0.34 | -0.31 | ||
74 | AT4G05250 | Ubiquitin-like superfamily protein | -0.6 | 0.33 | -0.31 | |||
75 | AT4G14060 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
-0.6 | 0.31 | -0.34 | |||
76 | AT5G26260 | TRAF-like family protein | -0.6 | 0.31 | -0.32 | |||
77 | AT3G01190 | Peroxidase superfamily protein | -0.59 | 0.31 | -0.31 | |||
78 | AT4G21340 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
B70 | -0.59 | 0.33 | -0.33 | ||
79 | AT4G29700 | Alkaline-phosphatase-like family protein | -0.58 | 0.3 | -0.33 | |||
80 | AT1G53950 | Ubiquitin-like superfamily protein | -0.58 | 0.34 | -0.31 | |||
81 | AT2G23540 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.55 | 0.31 | -0.32 | |||
82 | AT1G70850 | MLP-like protein 34 | MLP-like protein 34 | -0.55 | 0.32 | -0.33 | ||
83 | AT3G21680 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.55 | 0.31 | -0.31 | |||
84 | AT2G35380 | Peroxidase superfamily protein | -0.55 | 0.34 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
85 | C0135 | Kaempferol-hexosyl-dirhamnoside | - | - | - | -0.84 | 0.45 | -0.46 | ||
86 | C0051 | Aconitic acid | cis-Aconitic acid | cis-Aconitate | glutamine biosynthesis III, TCA cycle variation V (plant), glyoxylate cycle, TCA cycle variation III (eukaryotic) |
-0.75 | 0.45 | -0.44 |