ATCG00190 : RNA polymerase subunit beta
Query Information
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AGICode ATCG00190
Description RNA polymerase subunit beta
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 ATCG00190 RNA polymerase subunit beta RNA polymerase subunit beta 1 0.32 -0.31
2 ATCG00420 NADH dehydrogenase subunit J NADH dehydrogenase subunit J 0.82 0.31 -0.31
3 ATCG00170 DNA-directed RNA polymerase family protein RPOC2 0.8 0.31 -0.31
4 ATCG00500 acetyl-CoA carboxylase carboxyl transferase subunit beta acetyl-CoA carboxylase carboxyl
transferase subunit beta		 0.8 0.32 -0.29
5 ATCG00140 ATP synthase subunit C family protein ATPH 0.79 0.33 -0.33
6 ATCG00360 Tetratricopeptide repeat (TPR)-like superfamily protein YCF3 0.79 0.32 -0.32
7 ATCG00680 photosystem II reaction center protein B photosystem II reaction center
protein B		 0.79 0.31 -0.31
8 ATCG01060 iron-sulfur cluster binding;electron carriers;4 iron, 4
sulfur cluster binding		 PSAC 0.78 0.32 -0.3
9 ATCG00490 ribulose-bisphosphate carboxylases RBCL 0.78 0.32 -0.31
10 ATCG00150 ATPase, F0 complex, subunit A protein ATPI 0.78 0.33 -0.3
11 ATCG01110 NAD(P)H dehydrogenase subunit H NAD(P)H dehydrogenase subunit H 0.78 0.31 -0.31
12 ATCG00430 photosystem II reaction center protein G photosystem II reaction center
protein G		 0.77 0.31 -0.32
13 ATCG00130 ATPase, F0 complex, subunit B/B', bacterial/chloroplast ATPF 0.76 0.33 -0.31
14 ATCG00270 photosystem II reaction center protein D photosystem II reaction center
protein D		 0.75 0.32 -0.31
15 ATCG00790 ribosomal protein L16 ribosomal protein L16 0.74 0.32 -0.34
16 ATCG00210 electron transporter, transferring electrons within
cytochrome b6/f complex of photosystem IIs		 YCF6 0.74 0.32 -0.31
17 ATCG00690 photosystem II reaction center protein T photosystem II reaction center
protein T, PSBTC		 0.73 0.32 -0.34
18 ATCG00180 DNA-directed RNA polymerase family protein RPOC1 0.7 0.31 -0.32
19 ATCG00520 unfolded protein binding YCF4 0.7 0.31 -0.3
20 AT1G43800 Plant stearoyl-acyl-carrier-protein desaturase family
protein		 -0.69 0.31 -0.32
21 ATCG00160 ribosomal protein S2 ribosomal protein S2 0.69 0.31 -0.33
22 AT4G31970 cytochrome P450, family 82, subfamily C, polypeptide 2 cytochrome P450, family 82,
subfamily C, polypeptide 2		 -0.68 0.32 -0.31
23 AT2G29020 Rab5-interacting family protein -0.68 0.3 -0.31
24 AT4G15340 pentacyclic triterpene synthase 1 04C11, pentacyclic triterpene
synthase 1, pentacyclic triterpene
synthase 1		 -0.67 0.33 -0.33
25 AT4G22610 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.67 0.33 -0.29
26 ATCG00330 chloroplast ribosomal protein S14 chloroplast ribosomal protein S14 0.67 0.3 -0.32
27 AT4G20210 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.67 0.29 -0.33
28 ATCG00380 chloroplast ribosomal protein S4 chloroplast ribosomal protein S4 0.67 0.31 -0.32
29 AT2G30840 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.66 0.31 -0.34
30 ATCG01120 chloroplast ribosomal protein S15 chloroplast ribosomal protein S15 0.66 0.33 -0.3
31 ATMG01410 open reading frame 204 open reading frame 204 0.66 0.3 -0.31
32 ATCG00350 Photosystem I, PsaA/PsaB protein PSAA 0.65 0.31 -0.32
33 AT5G19520 mechanosensitive channel of small conductance-like 9 ATMSL9, mechanosensitive channel
of small conductance-like 9		 -0.65 0.32 -0.32
34 AT5G42590 cytochrome P450, family 71, subfamily A, polypeptide 16 cytochrome P450, family 71,
subfamily A, polypeptide 16,
marneral oxidase		 -0.65 0.31 -0.3
35 AT2G45660 AGAMOUS-like 20 AGAMOUS-like 20, SUPPRESSOR OF
OVEREXPRESSION OF CO 1, SUPPRESSOR
OF OVEREXPRESSION OF CO 1		 0.64 0.3 -0.31
36 ATCG00660 ribosomal protein L20 ribosomal protein L20 0.64 0.32 -0.32
37 ATCG01050 NADH-Ubiquinone/plastoquinone (complex I) protein NDHD 0.64 0.3 -0.33
38 AT5G10210 CONTAINS InterPro DOMAIN/s: C2 calcium-dependent membrane
targeting (InterPro:IPR000008); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT5G65030.1); Has
1807 Blast hits to 1807 proteins in 277 species: Archae -
0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.64 0.33 -0.3
39 AT1G05880 RING/U-box superfamily protein ARIADNE 12, ARABIDOPSIS ARIADNE 12 0.64 0.34 -0.3
40 AT5G53990 UDP-Glycosyltransferase superfamily protein -0.64 0.31 -0.34
41 ATCG00065 ribosomal protein S12A RIBOSOMAL PROTEIN S12, ribosomal
protein S12A		 0.63 0.31 -0.31
42 AT4G33130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: 6 growth stages; BEST Arabidopsis thaliana protein
match is: Protein of unknown function, DUF547
(TAIR:AT1G16750.1); Has 192 Blast hits to 192 proteins in
18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi -
0; Plants - 189; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.63 0.3 -0.33
43 AT4G08330 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G17705.1); Has 98 Blast
hits to 98 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.3 -0.31
44 ATCG00710 photosystem II reaction center protein H photosystem II reaction center
protein H		 0.63 0.31 -0.3
45 ATCG00730 photosynthetic electron transfer D photosynthetic electron transfer D 0.62 0.32 -0.33
46 AT5G58003 C-terminal domain phosphatase-like 4 C-terminal domain phosphatase-like
4		 0.62 0.31 -0.31
47 AT1G50560 cytochrome P450, family 705, subfamily A, polypeptide 25 cytochrome P450, family 705,
subfamily A, polypeptide 25		 -0.62 0.29 -0.31
48 AT1G80830 natural resistance-associated macrophage protein 1 ATNRAMP1, natural
resistance-associated macrophage
protein 1, PMIT1		 -0.62 0.3 -0.31
49 ATCG01070 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NDHE 0.62 0.31 -0.32
50 AT4G15093 catalytic LigB subunit of aromatic ring-opening dioxygenase
family		 -0.62 0.31 -0.33
51 AT2G05010 transposable element gene 0.61 0.33 -0.3
52 AT2G24010 serine carboxypeptidase-like 23 serine carboxypeptidase-like 23 0.6 0.32 -0.31
53 AT1G65810 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.6 0.33 -0.33
54 AT4G21340 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 B70 -0.6 0.31 -0.32
55 AT4G05200 cysteine-rich RLK (RECEPTOR-like protein kinase) 25 cysteine-rich RLK (RECEPTOR-like
protein kinase) 25		 -0.6 0.3 -0.31
56 AT1G08670 ENTH/VHS family protein -0.59 0.29 -0.32
57 AT1G36810 transposable element gene 0.59 0.32 -0.31
58 AT2G38110 glycerol-3-phosphate acyltransferase 6 GLYCEROL-3-PHOSPHATE
ACYLTRANSFERASE 6,
glycerol-3-phosphate
acyltransferase 6		 0.59 0.29 -0.32
59 AT2G25810 tonoplast intrinsic protein 4;1 tonoplast intrinsic protein 4;1 -0.59 0.32 -0.32
60 AT5G60520 Late embryogenesis abundant (LEA) protein-related -0.59 0.32 -0.32
61 AT1G19100 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 0.58 0.3 -0.3
62 AT5G35640 Putative endonuclease or glycosyl hydrolase -0.58 0.33 -0.32
63 AT1G51910 Leucine-rich repeat protein kinase family protein 0.58 0.31 -0.31
64 AT3G16857 response regulator 1 response regulator 1, response
regulator 1		 -0.58 0.33 -0.31
65 AT1G77130 plant glycogenin-like starch initiation protein 2 glucuronic acid substitution of
xylan 3, plant glycogenin-like
starch initiation protein 2		 -0.58 0.32 -0.35
66 AT1G19010 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G74860.1); Has 337 Blast hits
to 320 proteins in 97 species: Archae - 0; Bacteria - 14;
Metazoa - 153; Fungi - 26; Plants - 76; Viruses - 0; Other
Eukaryotes - 68 (source: NCBI BLink).		 0.58 0.32 -0.32
67 AT2G28540 RNA binding (RRM/RBD/RNP motifs) family protein 0.57 0.31 -0.3
68 ATCG00590 electron carriers ORF31 0.57 0.29 -0.31
69 AT3G13772 transmembrane nine 7 AtTMN7, transmembrane nine 7 -0.57 0.34 -0.3
70 AT3G12203 serine carboxypeptidase-like 17 serine carboxypeptidase-like 17 0.57 0.34 -0.31
71 ATCG00510 photsystem I subunit I photsystem I subunit I 0.57 0.31 -0.3
72 ATCG01080 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 NDHG 0.56 0.29 -0.31
73 AT5G48100 Laccase/Diphenol oxidase family protein ATLAC15, LACCASE-LIKE 15,
TRANSPARENT TESTA 10		 -0.56 0.29 -0.31
74 AT2G17150 Plant regulator RWP-RK family protein -0.56 0.33 -0.31
75 AT1G13540 Protein of unknown function (DUF1262) 0.56 0.3 -0.32
76 AT5G38195 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.56 0.3 -0.31
77 AT5G37170 O-methyltransferase family protein -0.56 0.32 -0.31
78 AT4G15090 FRS (FAR1 Related Sequences) transcription factor family FAR-RED IMPAIRED RESPONSE 1 0.56 0.32 -0.31
79 AT1G50750 Plant mobile domain protein family 0.56 0.32 -0.31
80 AT1G23690 Domain of unknown function DUF220 0.56 0.33 -0.33
81 AT3G04720 pathogenesis-related 4 HEVEIN-LIKE, PR-4,
pathogenesis-related 4		 -0.55 0.3 -0.31
82 AT1G19500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G35765.1); Has 9 Blast hits to 9 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.55 0.32 -0.29
83 AT4G22510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: shoot apex, leaf; Has 2 Blast
hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.55 0.32 -0.31
84 AT5G05540 small RNA degrading nuclease 2 small RNA degrading nuclease 2 -0.55 0.31 -0.31
85 AT4G29700 Alkaline-phosphatase-like family protein -0.55 0.32 -0.29
86 AT2G09910 transposable element gene 0.55 0.3 -0.31
87 AT2G46375 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G61660.1); Has 12 Blast hits
to 12 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.55 0.3 -0.3
88 AT3G27340 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
oxidation reduction; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine
dioxygenase, N-terminal (InterPro:IPR010376); Has 1035
Blast hits to 1035 proteins in 399 species: Archae - 0;
Bacteria - 765; Metazoa - 0; Fungi - 0; Plants - 39;
Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink).		 -0.54 0.33 -0.34
89 AT3G21170 F-box and associated interaction domains-containing protein -0.54 0.31 -0.3
90 AT1G31620 unknown protein; Has 9 Blast hits to 9 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.54 0.3 -0.32