ATCG00360 : YCF3
Query Information
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AGICode ATCG00360
Description Tetratricopeptide repeat (TPR)-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 ATCG00360 Tetratricopeptide repeat (TPR)-like superfamily protein YCF3 1 0.34 -0.29
2 ATCG00430 photosystem II reaction center protein G photosystem II reaction center
protein G		 0.88 0.31 -0.33
3 ATCG00690 photosystem II reaction center protein T photosystem II reaction center
protein T, PSBTC		 0.88 0.32 -0.3
4 ATCG01070 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NDHE 0.86 0.31 -0.32
5 ATCG00420 NADH dehydrogenase subunit J NADH dehydrogenase subunit J 0.86 0.33 -0.31
6 ATCG00270 photosystem II reaction center protein D photosystem II reaction center
protein D		 0.86 0.31 -0.33
7 ATCG01060 iron-sulfur cluster binding;electron carriers;4 iron, 4
sulfur cluster binding		 PSAC 0.85 0.32 -0.33
8 ATCG00500 acetyl-CoA carboxylase carboxyl transferase subunit beta acetyl-CoA carboxylase carboxyl
transferase subunit beta		 0.84 0.29 -0.33
9 ATCG00520 unfolded protein binding YCF4 0.84 0.33 -0.32
10 ATCG00150 ATPase, F0 complex, subunit A protein ATPI 0.83 0.33 -0.31
11 ATCG01120 chloroplast ribosomal protein S15 chloroplast ribosomal protein S15 0.83 0.29 -0.32
12 ATCG00790 ribosomal protein L16 ribosomal protein L16 0.82 0.3 -0.33
13 ATCG00160 ribosomal protein S2 ribosomal protein S2 0.82 0.32 -0.32
14 ATCG00510 photsystem I subunit I photsystem I subunit I 0.82 0.3 -0.33
15 ATCG00660 ribosomal protein L20 ribosomal protein L20 0.81 0.33 -0.3
16 ATCG01050 NADH-Ubiquinone/plastoquinone (complex I) protein NDHD 0.81 0.32 -0.34
17 ATCG01110 NAD(P)H dehydrogenase subunit H NAD(P)H dehydrogenase subunit H 0.81 0.32 -0.34
18 ATCG01080 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 NDHG 0.8 0.32 -0.31
19 ATCG00140 ATP synthase subunit C family protein ATPH 0.8 0.32 -0.3
20 ATCG00490 ribulose-bisphosphate carboxylases RBCL 0.79 0.3 -0.31
21 ATCG00190 RNA polymerase subunit beta RNA polymerase subunit beta 0.79 0.32 -0.33
22 ATCG00380 chloroplast ribosomal protein S4 chloroplast ribosomal protein S4 0.79 0.31 -0.32
23 ATCG00130 ATPase, F0 complex, subunit B/B', bacterial/chloroplast ATPF 0.78 0.29 -0.31
24 ATCG00680 photosystem II reaction center protein B photosystem II reaction center
protein B		 0.78 0.29 -0.31
25 ATCG01100 NADH dehydrogenase family protein NDHA 0.77 0.32 -0.32
26 ATCG00170 DNA-directed RNA polymerase family protein RPOC2 0.77 0.35 -0.31
27 ATCG00120 ATP synthase subunit alpha ATP synthase subunit alpha 0.77 0.32 -0.31
28 ATCG00730 photosynthetic electron transfer D photosynthetic electron transfer D 0.76 0.31 -0.32
29 ATCG00590 electron carriers ORF31 0.76 0.31 -0.31
30 ATCG00600 PETG PETG 0.75 0.31 -0.3
31 ATCG00340 Photosystem I, PsaA/PsaB protein PSAB 0.75 0.3 -0.3
32 ATCG00180 DNA-directed RNA polymerase family protein RPOC1 0.74 0.32 -0.32
33 ATCG00280 photosystem II reaction center protein C photosystem II reaction center
protein C		 0.73 0.31 -0.31
34 ATCG00530 CemA-like proton extrusion protein-related YCF10 0.71 0.31 -0.32
35 ATCG00700 photosystem II reaction center protein N photosystem II reaction center
protein N		 0.71 0.31 -0.31
36 ATCG01090 NADPH dehydrogenases NDHI 0.71 0.31 -0.31
37 ATCG00670 plastid-encoded CLP P CASEINOLYTIC PROTEASE P 1,
plastid-encoded CLP P		 0.71 0.33 -0.29
38 AT4G12550 Auxin-Induced in Root cultures 1 Auxin-Induced in Root cultures 1 -0.71 0.31 -0.33
39 AT3G06300 P4H isoform 2 P4H isoform 2, prolyl
4-hydroxylase 2		 -0.71 0.3 -0.3
40 AT1G80830 natural resistance-associated macrophage protein 1 ATNRAMP1, natural
resistance-associated macrophage
protein 1, PMIT1		 -0.7 0.32 -0.31
41 ATCG00330 chloroplast ribosomal protein S14 chloroplast ribosomal protein S14 0.7 0.33 -0.3
42 ATCG00210 electron transporter, transferring electrons within
cytochrome b6/f complex of photosystem IIs		 YCF6 0.7 0.33 -0.31
43 ATCG00065 ribosomal protein S12A RIBOSOMAL PROTEIN S12, ribosomal
protein S12A		 0.68 0.32 -0.31
44 AT5G48100 Laccase/Diphenol oxidase family protein ATLAC15, LACCASE-LIKE 15,
TRANSPARENT TESTA 10		 -0.68 0.32 -0.32
45 ATCG00710 photosystem II reaction center protein H photosystem II reaction center
protein H		 0.68 0.33 -0.3
46 ATCG00350 Photosystem I, PsaA/PsaB protein PSAA 0.67 0.31 -0.34
47 AT3G09490 Tetratricopeptide repeat (TPR)-like superfamily protein -0.67 0.33 -0.35
48 ATCG01040 Cytochrome C assembly protein YCF5 0.67 0.32 -0.31
49 ATCG00780 ribosomal protein L14 ribosomal protein L14 0.66 0.3 -0.31
50 ATCG00300 YCF9 YCF9 0.66 0.32 -0.31
51 AT3G55480 protein affected trafficking 2 beta-subunit of adaptor protein
complex 3, protein affected
trafficking 2		 0.64 0.33 -0.31
52 AT2G01930 basic pentacysteine1 BASIC PENTACYSTEINE1, BBR, basic
pentacysteine1		 0.63 0.33 -0.32
53 AT1G43800 Plant stearoyl-acyl-carrier-protein desaturase family
protein		 -0.62 0.32 -0.32
54 AT1G58190 receptor like protein 9 receptor like protein 9, receptor
like protein 9		 -0.62 0.32 -0.3
55 AT4G08330 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 14 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G17705.1); Has 98 Blast
hits to 98 proteins in 13 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.31 -0.31
56 AT1G67330 Protein of unknown function (DUF579) -0.62 0.32 -0.32
57 AT1G51910 Leucine-rich repeat protein kinase family protein 0.61 0.33 -0.31
58 AT1G73360 homeodomain GLABROUS 11 HOMEODOMAIN GLABROUS 11, ENHANCED
DROUGHT TOLERANCE 1, homeodomain
GLABROUS 11		 0.6 0.32 -0.33
59 ATCG01010 NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein NDHF 0.6 0.3 -0.32
60 AT2G38110 glycerol-3-phosphate acyltransferase 6 GLYCEROL-3-PHOSPHATE
ACYLTRANSFERASE 6,
glycerol-3-phosphate
acyltransferase 6		 0.6 0.28 -0.35
61 AT3G04720 pathogenesis-related 4 HEVEIN-LIKE, PR-4,
pathogenesis-related 4		 -0.59 0.3 -0.31
62 AT4G21340 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 B70 -0.59 0.33 -0.31
63 AT5G26260 TRAF-like family protein -0.59 0.33 -0.32
64 AT1G63420 Arabidopsis thaliana protein of unknown function (DUF821) 0.58 0.31 -0.34
65 AT1G75360 unknown protein; Has 74 Blast hits to 71 proteins in 15
species: Archae - 0; Bacteria - 4; Metazoa - 4; Fungi - 0;
Plants - 54; Viruses - 0; Other Eukaryotes - 12 (source:
NCBI BLink).		 0.58 0.3 -0.3
66 AT2G01820 Leucine-rich repeat protein kinase family protein 0.58 0.32 -0.34
67 AT3G52710 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 19 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G36220.1); Has 64 Blast
hits to 64 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.3 -0.3
68 AT3G18230 Octicosapeptide/Phox/Bem1p family protein -0.57 0.31 -0.31
69 ATCG00440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3
protein		 NDHC 0.57 0.31 -0.31
70 AT1G10990 unknown protein; Has 4 Blast hits to 4 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.57 0.3 -0.32
71 AT2G28540 RNA binding (RRM/RBD/RNP motifs) family protein 0.56 0.33 -0.33
72 AT2G09910 transposable element gene 0.56 0.31 -0.31
73 AT4G31970 cytochrome P450, family 82, subfamily C, polypeptide 2 cytochrome P450, family 82,
subfamily C, polypeptide 2		 -0.56 0.32 -0.32
74 AT2G35580 Serine protease inhibitor (SERPIN) family protein 0.56 0.31 -0.33
75 AT4G14190 Pentatricopeptide repeat (PPR) superfamily protein 0.56 0.28 -0.33
76 AT1G29680 Protein of unknown function (DUF1264) 0.56 0.32 -0.31
77 AT5G05350 PLAC8 family protein 0.55 0.3 -0.33
78 AT5G11870 Alkaline phytoceramidase (aPHC) -0.55 0.32 -0.29
79 AT5G38195 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.55 0.33 -0.3
80 AT3G47210 Plant protein of unknown function (DUF247) -0.55 0.31 -0.32
81 AT2G36120 Glycine-rich protein family DEFECTIVELY ORGANIZED TRIBUTARIES
1		 -0.55 0.3 -0.31
82 AT3G09370 myb domain protein 3r-3 myb domain protein 3R3, myb domain
protein 3r-3		 0.55 0.32 -0.34
83 AT5G17300 Homeodomain-like superfamily protein REVEILLE 1 0.55 0.31 -0.31
84 AT2G39540 Gibberellin-regulated family protein 0.55 0.32 -0.32
85 AT1G12820 auxin signaling F-box 3 auxin signaling F-box 3 0.54 0.33 -0.32
86 AT3G27340 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
oxidation reduction; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine
dioxygenase, N-terminal (InterPro:IPR010376); Has 1035
Blast hits to 1035 proteins in 399 species: Archae - 0;
Bacteria - 765; Metazoa - 0; Fungi - 0; Plants - 39;
Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink).		 -0.54 0.34 -0.33
87 AT4G18650 transcription factor-related 0.54 0.28 -0.31
88 AT1G59960 NAD(P)-linked oxidoreductase superfamily protein -0.53 0.29 -0.32
89 AT1G47885 Ribonuclease inhibitor -0.53 0.29 -0.31
90 AT1G20690 SWI-SNF-related chromatin binding protein -0.52 0.31 -0.3
91 AT1G07150 mitogen-activated protein kinase kinase kinase 13 mitogen-activated protein kinase
kinase kinase 13		 -0.51 0.32 -0.32
92 AT4G19185 nodulin MtN21 /EamA-like transporter family protein -0.51 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
93 C0103 Glutaric acid - - - -0.65 0.44 -0.44