ATCG00540 : photosynthetic electron transfer A
Query Information
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AGICode ATCG00540
Description photosynthetic electron transfer A
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 ATCG00540 photosynthetic electron transfer A photosynthetic electron transfer A 1 0.31 -0.32
2 ATCG00530 CemA-like proton extrusion protein-related YCF10 0.86 0.29 -0.31
3 ATCG00750 ribosomal protein S11 ribosomal protein S11 0.84 0.3 -0.29
4 ATCG00820 ribosomal protein S19 ribosomal protein S19 0.83 0.33 -0.32
5 ATCG00770 ribosomal protein S8 ribosomal protein S8 0.83 0.31 -0.31
6 ATCG00340 Photosystem I, PsaA/PsaB protein PSAB 0.83 0.31 -0.35
7 ATCG00740 RNA polymerase subunit alpha RNA polymerase subunit alpha 0.82 0.3 -0.31
8 ATCG01100 NADH dehydrogenase family protein NDHA 0.81 0.33 -0.32
9 ATCG00510 photsystem I subunit I photsystem I subunit I 0.81 0.33 -0.31
10 ATCG00120 ATP synthase subunit alpha ATP synthase subunit alpha 0.8 0.32 -0.31
11 ATCG00040 maturase K maturase K 0.8 0.31 -0.29
12 ATCG01120 chloroplast ribosomal protein S15 chloroplast ribosomal protein S15 0.79 0.32 -0.31
13 ATCG01090 NADPH dehydrogenases NDHI 0.79 0.32 -0.3
14 ATCG01050 NADH-Ubiquinone/plastoquinone (complex I) protein NDHD 0.78 0.31 -0.31
15 ATCG00800 structural constituent of ribosome 0.76 0.3 -0.31
16 ATCG00720 photosynthetic electron transfer B photosynthetic electron transfer B 0.76 0.32 -0.31
17 ATCG00160 ribosomal protein S2 ribosomal protein S2 0.76 0.34 -0.3
18 ATCG00630 PSAJ PSAJ 0.75 0.31 -0.29
19 ATCG01040 Cytochrome C assembly protein YCF5 0.75 0.33 -0.31
20 ATCG00710 photosystem II reaction center protein H photosystem II reaction center
protein H		 0.75 0.32 -0.31
21 ATCG00670 plastid-encoded CLP P CASEINOLYTIC PROTEASE P 1,
plastid-encoded CLP P		 0.75 0.33 -0.33
22 ATCG00480 ATP synthase subunit beta ATP synthase subunit beta, ATP
synthase subunit beta		 0.74 0.33 -0.32
23 ATCG00180 DNA-directed RNA polymerase family protein RPOC1 0.74 0.3 -0.33
24 AT1G74030 enolase 1 enolase 1 -0.74 0.29 -0.32
25 AT1G12330 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G12900.1); Has 249 Blast hits to 249 proteins in
27 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi -
14; Plants - 217; Viruses - 0; Other Eukaryotes - 11
(source: NCBI BLink).		 0.74 0.32 -0.33
26 ATCG00520 unfolded protein binding YCF4 0.74 0.31 -0.32
27 ATCG00780 ribosomal protein L14 ribosomal protein L14 0.74 0.31 -0.32
28 AT1G01320 Tetratricopeptide repeat (TPR)-like superfamily protein 0.73 0.3 -0.31
29 ATCG01020 ribosomal protein L32 ribosomal protein L32 0.73 0.32 -0.33
30 AT1G28100 unknown protein; Has 64 Blast hits to 64 proteins in 27
species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 6;
Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.73 0.32 -0.31
31 ATCG00300 YCF9 YCF9 0.73 0.3 -0.34
32 AT1G17860 Kunitz family trypsin and protease inhibitor protein -0.72 0.33 -0.32
33 ATCG00550 photosystem II reaction center protein J photosystem II reaction center
protein J		 0.72 0.33 -0.32
34 AT3G46440 UDP-XYL synthase 5 UDP-XYL synthase 5 -0.71 0.33 -0.31
35 ATCG00760 ribosomal protein L36 ribosomal protein L36 0.71 0.3 -0.31
36 AT1G02020 nitroreductase family protein 0.7 0.32 -0.3
37 AT4G38180 FAR1-related sequence 5 FAR1-related sequence 5 0.7 0.34 -0.32
38 AT3G54770 RNA-binding (RRM/RBD/RNP motifs) family protein -0.7 0.31 -0.29
39 ATCG00440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3
protein		 NDHC 0.7 0.33 -0.3
40 AT2G38700 mevalonate diphosphate decarboxylase 1 ATMVD1, mevalonate diphosphate
decarboxylase 1		 -0.7 0.32 -0.32
41 ATCG00570 photosystem II reaction center protein F photosystem II reaction center
protein F		 0.7 0.32 -0.29
42 AT5G18475 Pentatricopeptide repeat (PPR) superfamily protein 0.7 0.29 -0.31
43 ATCG00600 PETG PETG 0.69 0.29 -0.32
44 AT3G14980 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 0.69 0.33 -0.31
45 AT5G46880 homeobox-7 homeobox-7, HOMEODOMAIN GLABROUS 5 0.69 0.32 -0.32
46 AT1G28570 SGNH hydrolase-type esterase superfamily protein 0.69 0.31 -0.32
47 AT2G30150 UDP-Glycosyltransferase superfamily protein 0.69 0.31 -0.32
48 ATCG00560 photosystem II reaction center protein L photosystem II reaction center
protein L		 0.69 0.32 -0.34
49 AT5G37740 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.69 0.32 -0.31
50 ATCG00790 ribosomal protein L16 ribosomal protein L16 0.68 0.3 -0.32
51 ATCG00070 photosystem II reaction center protein K precursor photosystem II reaction center
protein K precursor		 0.68 0.31 -0.32
52 ATCG00590 electron carriers ORF31 0.68 0.3 -0.33
53 AT1G32360 Zinc finger (CCCH-type) family protein 0.68 0.32 -0.33
54 ATCG00700 photosystem II reaction center protein N photosystem II reaction center
protein N		 0.68 0.31 -0.32
55 AT1G26820 ribonuclease 3 ribonuclease 3 -0.68 0.31 -0.31
56 AT1G17060 cytochrome p450 72c1 CHIBI 2, cytochrome p450 72c1,
SHRINK 1, SUPPRESSOR OF PHYB-4 7		 -0.68 0.32 -0.31
57 AT2G44450 beta glucosidase 15 beta glucosidase 15 -0.68 0.29 -0.31
58 AT4G02090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: root; Has 132
Blast hits to 132 proteins in 12 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 132; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.33 -0.3
59 AT5G20840 Phosphoinositide phosphatase family protein 0.67 0.32 -0.32
60 AT4G27270 Quinone reductase family protein -0.67 0.32 -0.32
61 AT1G03320 unknown protein; Has 1038 Blast hits to 683 proteins in 112
species: Archae - 4; Bacteria - 14; Metazoa - 318; Fungi -
117; Plants - 86; Viruses - 8; Other Eukaryotes - 491
(source: NCBI BLink).		 0.67 0.31 -0.33
62 AT1G79350 RING/FYVE/PHD zinc finger superfamily protein embryo defective 1135 0.67 0.34 -0.32
63 AT5G66690 UDP-Glycosyltransferase superfamily protein UGT72E2 -0.67 0.31 -0.3
64 AT5G66940 Dof-type zinc finger DNA-binding family protein 0.67 0.31 -0.33
65 ATCG00380 chloroplast ribosomal protein S4 chloroplast ribosomal protein S4 0.67 0.33 -0.32
66 AT2G34140 Dof-type zinc finger DNA-binding family protein -0.66 0.31 -0.3
67 AT5G27630 acyl-CoA binding protein 5 acyl-CoA binding protein 5 0.66 0.32 -0.32
68 ATCG00080 photosystem II reaction center protein I photosystem II reaction center
protein I		 0.66 0.32 -0.33
69 AT4G34040 RING/U-box superfamily protein 0.66 0.32 -0.33
70 AT2G34020 Calcium-binding EF-hand family protein -0.66 0.33 -0.31
71 AT1G14080 fucosyltransferase 6 ATFUT6, fucosyltransferase 6 -0.65 0.32 -0.31
72 AT2G44180 methionine aminopeptidase 2A methionine aminopeptidase 2A -0.65 0.31 -0.32
73 AT2G02080 indeterminate(ID)-domain 4 indeterminate(ID)-domain 4,
indeterminate(ID)-domain 4		 0.65 0.3 -0.29
74 AT5G23830 MD-2-related lipid recognition domain-containing protein -0.65 0.29 -0.32
75 AT3G04680 CLP-similar protein 3 CLP-similar protein 3 -0.65 0.31 -0.32
76 ATCG00170 DNA-directed RNA polymerase family protein RPOC2 0.65 0.33 -0.32
77 AT3G60070 Major facilitator superfamily protein 0.65 0.32 -0.3
78 AT4G36430 Peroxidase superfamily protein -0.65 0.32 -0.33
79 AT4G29270 HAD superfamily, subfamily IIIB acid phosphatase -0.65 0.3 -0.32
80 AT1G69810 WRKY DNA-binding protein 36 ATWRKY36, WRKY DNA-binding protein
36		 -0.65 0.32 -0.32
81 AT4G30170 Peroxidase family protein -0.65 0.31 -0.32
82 AT1G14620 decoy DECOY -0.65 0.31 -0.31
83 AT4G24280 chloroplast heat shock protein 70-1 chloroplast heat shock protein
70-1		 0.65 0.32 -0.32
84 AT5G17330 glutamate decarboxylase glutamate decarboxylase, GLUTAMATE
DECARBOXYLASE 1		 -0.65 0.32 -0.31
85 AT2G22475 GRAM domain family protein GL2-EXPRESSION MODULATOR -0.65 0.31 -0.3
86 ATCG01110 NAD(P)H dehydrogenase subunit H NAD(P)H dehydrogenase subunit H 0.65 0.31 -0.33
87 AT3G08850 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1B, RAPTOR1, RAPTOR1B 0.64 0.31 -0.31
88 AT4G33210 F-box family protein SLOW MOTION 0.64 0.31 -0.33
89 AT4G31320 SAUR-like auxin-responsive protein family -0.64 0.33 -0.31
90 AT2G36810 ARM repeat superfamily protein 0.64 0.34 -0.31
91 AT1G08990 plant glycogenin-like starch initiation protein 5 plant glycogenin-like starch
initiation protein 5		 -0.64 0.32 -0.3
92 AT1G03060 Beige/BEACH domain ;WD domain, G-beta repeat protein SPIRRIG 0.64 0.35 -0.34
93 AT1G35570 transposable element gene 0.64 0.32 -0.33
94 AT3G29290 Pentatricopeptide repeat (PPR) superfamily protein embryo defective 2076 0.64 0.3 -0.3
95 AT3G26350 LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel,
carpel, stamen; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Late embryogenesis abundant protein, group 2
(InterPro:IPR004864); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G13050.1); Has 3534
Blast hits to 2704 proteins in 342 species: Archae - 6;
Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162;
Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink).		 0.64 0.32 -0.31
96 AT4G37410 cytochrome P450, family 81, subfamily F, polypeptide 4 cytochrome P450, family 81,
subfamily F, polypeptide 4		 -0.63 0.3 -0.31
97 AT5G12410 THUMP domain-containing protein -0.63 0.34 -0.31
98 ATCG01070 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L NDHE 0.63 0.34 -0.33
99 AT1G50840 polymerase gamma 2 polymerase gamma 2, polymerase I A 0.63 0.31 -0.32
100 AT2G25660 embryo defective 2410 embryo defective 2410 0.63 0.32 -0.3
101 AT5G59800 methyl-CPG-binding domain 7 ARABIDOPSIS THALIANA
METHYL-CPG-BINDING DOMAIN 7,
methyl-CPG-binding domain 7		 0.63 0.34 -0.29
102 AT5G07180 ERECTA-like 2 ERECTA-like 2 0.63 0.31 -0.31
103 AT1G32810 RING/FYVE/PHD zinc finger superfamily protein 0.63 0.29 -0.3
104 AT2G46140 Late embryogenesis abundant protein -0.63 0.31 -0.3
105 AT5G60950 COBRA-like protein 5 precursor COBRA-like protein 5 precursor -0.62 0.3 -0.32
106 AT1G05280 Protein of unknown function (DUF604) -0.62 0.28 -0.34
107 AT3G17300 unknown protein; Has 48 Blast hits to 48 proteins in 21
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 8 (source:
NCBI BLink).		 At3g17300 -0.62 0.32 -0.3
108 AT2G35270 Predicted AT-hook DNA-binding family protein GIANT KILLER -0.62 0.33 -0.3
109 AT2G42570 TRICHOME BIREFRINGENCE-LIKE 39 TRICHOME BIREFRINGENCE-LIKE 39 -0.62 0.31 -0.31
110 AT1G10990 unknown protein; Has 4 Blast hits to 4 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.62 0.3 -0.32
111 AT5G57620 myb domain protein 36 myb domain protein 36, myb domain
protein 36		 -0.62 0.3 -0.32
112 AT3G01190 Peroxidase superfamily protein -0.61 0.31 -0.31
113 AT3G05890 Low temperature and salt responsive protein family RARE-COLD-INDUCIBLE 2B -0.61 0.31 -0.31
114 AT4G01740 Cysteine/Histidine-rich C1 domain family protein -0.61 0.3 -0.3
115 AT4G22250 RING/U-box superfamily protein -0.61 0.32 -0.29
116 AT2G26290 root-specific kinase 1 root-specific kinase 1 -0.61 0.31 -0.3
117 AT1G05205 unknown protein; Has 44 Blast hits to 44 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.32 -0.32
118 AT3G22360 alternative oxidase 1B alternative oxidase 1B -0.61 0.31 -0.3
119 AT1G27140 glutathione S-transferase tau 14 glutathione S-transferase tau 14,
GLUTATHIONE S-TRANSFERASE 13,
glutathione S-transferase tau 14		 -0.61 0.31 -0.32
120 AT4G14695 Uncharacterised protein family (UPF0041) -0.61 0.31 -0.32
121 AT5G47440 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region		 -0.6 0.32 -0.31
122 AT3G09490 Tetratricopeptide repeat (TPR)-like superfamily protein -0.6 0.3 -0.33
123 AT3G04800 translocase inner membrane subunit 23-3 translocase inner membrane subunit
23-3, translocase inner membrane
subunit 23-3		 -0.6 0.28 -0.3
124 AT1G12740 cytochrome P450, family 87, subfamily A, polypeptide 2 cytochrome P450, family 87,
subfamily A, polypeptide 2		 -0.6 0.31 -0.32
125 AT3G30350 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 4 -0.6 0.3 -0.3
126 AT3G25900 Homocysteine S-methyltransferase family protein ATHMT-1, HMT-1 -0.6 0.34 -0.31
127 AT3G20840 Integrase-type DNA-binding superfamily protein PLETHORA 1 -0.6 0.33 -0.3
128 AT5G48000 cytochrome P450, family 708, subfamily A, polypeptide 2 CYTOCHROME P450, FAMILY 708,
SUBFAMILY A, POLYPEPTIDE 2,
cytochrome P450, family 708,
subfamily A, polypeptide 2,
THALIANOL HYDROXYLASE, THALIANOL
HYDROXYLASE 1		 -0.59 0.31 -0.3
129 AT5G11540 D-arabinono-1,4-lactone oxidase family protein -0.59 0.31 -0.32
130 AT5G45510 Leucine-rich repeat (LRR) family protein -0.59 0.3 -0.34
131 AT2G36120 Glycine-rich protein family DEFECTIVELY ORGANIZED TRIBUTARIES
1		 -0.59 0.3 -0.3
132 AT4G03610 Metallo-hydrolase/oxidoreductase superfamily protein -0.58 0.32 -0.33
133 AT4G00110 UDP-D-glucuronate 4-epimerase 3 UDP-D-glucuronate 4-epimerase 3 -0.58 0.31 -0.3
134 AT1G71940 SNARE associated Golgi protein family -0.58 0.31 -0.34
135 AT3G20710 F-box family protein -0.58 0.31 -0.3
136 AT5G10130 Pollen Ole e 1 allergen and extensin family protein -0.57 0.32 -0.31
137 AT4G11880 AGAMOUS-like 14 AGAMOUS-like 14 -0.57 0.31 -0.31
138 AT2G23540 GDSL-like Lipase/Acylhydrolase superfamily protein -0.57 0.31 -0.33
139 AT4G32890 GATA transcription factor 9 GATA transcription factor 9 -0.57 0.32 -0.29
140 AT5G20950 Glycosyl hydrolase family protein -0.57 0.3 -0.31
141 AT1G36940 unknown protein; Has 21 Blast hits to 21 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.57 0.32 -0.31
142 AT3G29250 NAD(P)-binding Rossmann-fold superfamily protein AtSDR4, short-chain dehydrogenase
reductase 4		 -0.57 0.33 -0.33
143 AT5G58590 RAN binding protein 1 RAN binding protein 1 -0.57 0.32 -0.3
144 AT1G61620 phosphoinositide binding -0.57 0.35 -0.33
145 AT5G02100 Oxysterol-binding family protein OSBP(OXYSTEROL BINDING
PROTEIN)-RELATED PROTEIN 3A,
UNFERTILIZED EMBRYO SAC 18		 -0.57 0.32 -0.33
146 AT5G56540 arabinogalactan protein 14 arabinogalactan protein 14,
ATAGP14		 -0.57 0.31 -0.31
147 AT1G74500 activation-tagged BRI1(brassinosteroid-insensitive
1)-suppressor 1		 activation-tagged
BRI1(brassinosteroid-insensitive
1)-suppressor 1, activation-tagged
BRI1(brassinosteroid-insensitive
1)-suppressor 1, TARGET OF
MONOPTEROS 7		 -0.57 0.33 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
148 C0133 Kaempferol-3,7-O-α-dirhamnopyranoside Kaempferol-3,7-O-α-L-dirhamnopyranoside Kaempferol-3-rhamnoside-7-rhamnoside kaempferol glucoside biosynthesis (Arabidopsis) 0.85 0.46 -0.47 C0133
149 C0086 Disinapylspermidine - - - 0.7 0.4 -0.44
150 C0214 PR_MST_2412.1 - - - 0.66 0.43 -0.44