ATCG00550 : photosystem II reaction center protein J
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode ATCG00550
Description photosystem II reaction center protein J
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 ATCG00550 photosystem II reaction center protein J photosystem II reaction center
protein J		 1 0.32 -0.33
2 ATCG00560 photosystem II reaction center protein L photosystem II reaction center
protein L		 0.87 0.3 -0.31
3 ATCG00580 photosystem II reaction center protein E photosystem II reaction center
protein E		 0.81 0.31 -0.31
4 AT1G09010 glycoside hydrolase family 2 protein 0.8 0.3 -0.32
5 AT5G13690 alpha-N-acetylglucosaminidase family / NAGLU family CYCLOPS 1,
N-ACETYL-GLUCOSAMINIDASE		 0.75 0.33 -0.33
6 ATCG00570 photosystem II reaction center protein F photosystem II reaction center
protein F		 0.73 0.34 -0.31
7 AT1G02020 nitroreductase family protein 0.72 0.33 -0.29
8 AT3G20930 RNA-binding (RRM/RBD/RNP motifs) family protein 0.72 0.3 -0.29
9 ATCG00540 photosynthetic electron transfer A photosynthetic electron transfer A 0.72 0.32 -0.31
10 AT2G22475 GRAM domain family protein GL2-EXPRESSION MODULATOR -0.72 0.3 -0.31
11 ATCG00530 CemA-like proton extrusion protein-related YCF10 0.71 0.31 -0.33
12 ATCG00770 ribosomal protein S8 ribosomal protein S8 0.71 0.31 -0.32
13 AT1G02360 Chitinase family protein -0.71 0.31 -0.32
14 AT4G39420 unknown protein; Has 46 Blast hits to 40 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.7 0.32 -0.34
15 ATCG00750 ribosomal protein S11 ribosomal protein S11 0.7 0.31 -0.31
16 AT1G58250 Golgi-body localisation protein domain ;RNA pol II promoter
Fmp27 protein domain		 SABRE 0.7 0.33 -0.32
17 AT3G08630 Protein of unknown function (DUF3411) -0.7 0.31 -0.3
18 AT3G14290 20S proteasome alpha subunit E2 20S proteasome alpha subunit E2 -0.69 0.31 -0.33
19 AT3G17420 glyoxysomal protein kinase 1 glyoxysomal protein kinase 1 -0.68 0.31 -0.31
20 AT3G08850 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1B, RAPTOR1, RAPTOR1B 0.68 0.29 -0.31
21 AT5G55390 ENHANCED DOWNY MILDEW 2 ENHANCED DOWNY MILDEW 2 0.68 0.31 -0.32
22 ATCG00340 Photosystem I, PsaA/PsaB protein PSAB 0.68 0.31 -0.31
23 AT1G72190 D-isomer specific 2-hydroxyacid dehydrogenase family
protein		 0.68 0.32 -0.32
24 AT2G36310 uridine-ribohydrolase 1 nucleoside hydrolase 1,
uridine-ribohydrolase 1		 -0.68 0.31 -0.3
25 AT2G45620 Nucleotidyltransferase family protein 0.68 0.34 -0.33
26 AT1G53210 sodium/calcium exchanger family protein / calcium-binding
EF hand family protein		 0.67 0.3 -0.3
27 AT1G28570 SGNH hydrolase-type esterase superfamily protein 0.67 0.31 -0.34
28 AT1G74030 enolase 1 enolase 1 -0.67 0.3 -0.31
29 ATCG00080 photosystem II reaction center protein I photosystem II reaction center
protein I		 0.67 0.31 -0.3
30 ATCG00120 ATP synthase subunit alpha ATP synthase subunit alpha 0.67 0.31 -0.3
31 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.67 0.29 -0.36
32 ATCG00630 PSAJ PSAJ 0.66 0.3 -0.31
33 AT4G01100 adenine nucleotide transporter 1 adenine nucleotide transporter 1 -0.66 0.29 -0.29
34 AT3G48190 ataxia-telangiectasia mutated ARABIDOPSIS THALIANA
ATAXIA-TELANGIECTASIA MUTATED,
ataxia-telangiectasia mutated, pcd
in male gametogenesis 1		 0.66 0.31 -0.33
35 AT3G17780 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
intracellular protein transport; LOCATED IN: endomembrane
system, integral to membrane, endoplasmic reticulum;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: B-cell
receptor-associated 31-like (InterPro:IPR008417); BEST
Arabidopsis thaliana protein match is: B-cell
receptor-associated 31-like (TAIR:AT1G48440.1); Has 102
Blast hits to 102 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.3 -0.29
36 AT2G36810 ARM repeat superfamily protein 0.66 0.3 -0.34
37 AT5G55610 unknown protein; LOCATED IN: mitochondrion, chloroplast,
plastid, membrane; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.66 0.31 -0.32
38 AT4G34040 RING/U-box superfamily protein 0.66 0.31 -0.32
39 AT3G17290 transposable element gene 0.65 0.31 -0.31
40 AT5G07110 prenylated RAB acceptor 1.B6 prenylated RAB acceptor 1.B6 -0.65 0.31 -0.32
41 AT5G02270 non-intrinsic ABC protein 9 ATP-binding cassette I20,
ARABIDOPSIS THALIANA NON-INTRINSIC
ABC PROTEIN 9, non-intrinsic ABC
protein 9		 -0.65 0.32 -0.3
42 AT4G28760 Protein of unknown function (DUF3741) 0.65 0.32 -0.29
43 AT2G35270 Predicted AT-hook DNA-binding family protein GIANT KILLER -0.65 0.35 -0.29
44 AT3G18940 clast3-related -0.65 0.33 -0.3
45 AT1G32360 Zinc finger (CCCH-type) family protein 0.65 0.27 -0.32
46 AT5G61030 glycine-rich RNA-binding protein 3 glycine-rich RNA-binding protein 3 -0.65 0.31 -0.31
47 AT3G56140 Protein of unknown function (DUF399 and DUF3411) 0.65 0.31 -0.3
48 AT5G54140 IAA-leucine-resistant (ILR1)-like 3 IAA-leucine-resistant (ILR1)-like
3		 -0.65 0.31 -0.31
49 AT5G52230 methyl-CPG-binding domain protein 13 methyl-CPG-binding domain protein
13		 0.65 0.29 -0.32
50 AT1G72650 TRF-like 6 TRF-like 6 0.65 0.3 -0.31
51 AT1G72730 DEA(D/H)-box RNA helicase family protein -0.65 0.3 -0.3
52 ATCG01100 NADH dehydrogenase family protein NDHA 0.64 0.32 -0.31
53 AT3G53610 RAB GTPase homolog 8 RAB GTPase homolog 8, AtRab8B,
AtRABE1a, RAB GTPase homolog 8		 -0.64 0.32 -0.31
54 AT2G17110 Protein of unknown function (DUF630 and DUF632) 0.64 0.31 -0.3
55 AT2G29540 RNApolymerase 14 kDa subunit ATRPAC14, RNApolymerase 14 kDa
subunit, RNApolymerase 14 kDa
subunit		 -0.64 0.31 -0.3
56 AT5G62290 nucleotide-sensitive chloride conductance regulator (ICln)
family protein		 -0.64 0.3 -0.29
57 AT1G03060 Beige/BEACH domain ;WD domain, G-beta repeat protein SPIRRIG 0.64 0.31 -0.29
58 AT5G07960 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0139
(InterPro:IPR005351); Has 193 Blast hits to 193 proteins in
75 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi
- 0; Plants - 52; Viruses - 0; Other Eukaryotes - 11
(source: NCBI BLink).		 -0.64 0.29 -0.3
59 AT2G44820 unknown protein; Has 70 Blast hits to 70 proteins in 25
species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 4;
Plants - 47; Viruses - 0; Other Eukaryotes - 10 (source:
NCBI BLink).		 -0.64 0.32 -0.32
60 AT5G39580 Peroxidase superfamily protein -0.63 0.3 -0.33
61 AT5G15240 Transmembrane amino acid transporter family protein 0.63 0.33 -0.31
62 AT1G52570 phospholipase D alpha 2 phospholipase D alpha 2 0.63 0.3 -0.32
63 AT3G13160 Tetratricopeptide repeat (TPR)-like superfamily protein -0.63 0.31 -0.32
64 AT3G63180 TIC-like TICKLE, TIC-like 0.63 0.32 -0.32
65 AT1G28100 unknown protein; Has 64 Blast hits to 64 proteins in 27
species: Archae - 0; Bacteria - 14; Metazoa - 0; Fungi - 6;
Plants - 42; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.63 0.33 -0.33
66 AT2G25660 embryo defective 2410 embryo defective 2410 0.63 0.31 -0.32
67 AT5G10430 arabinogalactan protein 4 arabinogalactan protein 4, ATAGP4 -0.63 0.3 -0.29
68 AT1G15290 Tetratricopeptide repeat (TPR)-like superfamily protein 0.63 0.33 -0.31
69 AT3G18200 nodulin MtN21 /EamA-like transporter family protein -0.63 0.33 -0.35
70 AT1G35570 transposable element gene 0.63 0.31 -0.3
71 AT1G04070 translocase of outer membrane 22-I ATTOM22-I, translocase of outer
membrane 22-I		 -0.63 0.31 -0.32
72 AT2G10020 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.63 0.3 -0.33
73 AT3G07400 lipase class 3 family protein 0.62 0.31 -0.29
74 AT1G56570 Tetratricopeptide repeat (TPR)-like superfamily protein PENTATRICOPEPTIDE REPEAT PROTEIN
FOR GERMINATION ON NaCl		 0.62 0.31 -0.3
75 AT2G47640 Small nuclear ribonucleoprotein family protein -0.62 0.3 -0.33
76 AT1G26840 origin recognition complex protein 6 ARABIDOPSIS THALIANA ORIGIN
RECOGNITION COMPLEX PROTEIN 6,
origin recognition complex protein
6		 -0.62 0.32 -0.34
77 AT1G63960 Copper transport protein family 0.62 0.3 -0.3
78 ATCG00510 photsystem I subunit I photsystem I subunit I 0.62 0.32 -0.3
79 AT3G12700 Eukaryotic aspartyl protease family protein -0.62 0.3 -0.32
80 AT3G07590 Small nuclear ribonucleoprotein family protein -0.62 0.31 -0.31
81 AT1G63000 nucleotide-rhamnose synthase/epimerase-reductase nucleotide-rhamnose
synthase/epimerase-reductase,
UDP-4-KETO-6-DEOXY-D-GLUCOSE-3,5-E
PIMERASE-4-REDUCTASE 1		 -0.61 0.33 -0.29
82 AT2G43600 Chitinase family protein -0.61 0.3 -0.32
83 AT4G27270 Quinone reductase family protein -0.61 0.31 -0.32
84 AT3G09600 Homeodomain-like superfamily protein LHY-CCA1-LIKE5, REVEILLE 8 0.61 0.33 -0.35
85 AT3G02500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G16030.1); Has 49 Blast hits
to 49 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.61 0.31 -0.33
86 AT1G73970 unknown protein; Has 34 Blast hits to 33 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.61 0.31 -0.32
87 AT1G53670 methionine sulfoxide reductase B 1 ATMSRB1, methionine sulfoxide
reductase B 1		 0.61 0.31 -0.32
88 AT2G18190 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.61 0.32 -0.31
89 AT2G28680 RmlC-like cupins superfamily protein 0.61 0.33 -0.3
90 AT5G48340 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.61 0.3 -0.3
91 AT2G26290 root-specific kinase 1 root-specific kinase 1 -0.61 0.32 -0.33
92 AT1G66140 zinc finger protein 4 zinc finger protein 4 0.61 0.34 -0.3
93 AT5G18475 Pentatricopeptide repeat (PPR) superfamily protein 0.61 0.33 -0.32
94 AT5G56320 expansin A14 ATEXP14, expansin A14, ATHEXP
ALPHA 1.5, EXPANSIN 14, expansin
A14		 -0.61 0.32 -0.3
95 AT4G14695 Uncharacterised protein family (UPF0041) -0.61 0.33 -0.31
96 AT2G34020 Calcium-binding EF-hand family protein -0.61 0.32 -0.31
97 AT1G68490 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast
hits to 125 proteins in 18 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.31 -0.3
98 AT2G17000 Mechanosensitive ion channel family protein 0.6 0.31 -0.32
99 AT1G69810 WRKY DNA-binding protein 36 ATWRKY36, WRKY DNA-binding protein
36		 -0.6 0.32 -0.31
100 AT5G07050 nodulin MtN21 /EamA-like transporter family protein 0.6 0.31 -0.35
101 AT4G11850 phospholipase D gamma 1 maternal effect embryo arrest 54,
phospholipase D gamma 1		 -0.6 0.32 -0.34
102 AT3G20420 RNAse THREE-like protein 2 RNASEIII-LIKE 2, RNAse THREE-like
protein 2		 0.59 0.31 -0.31
103 AT3G23590 REF4-related 1 MED33A, REF4-related 1 0.59 0.32 -0.33
104 ATCG00440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3
protein		 NDHC 0.59 0.32 -0.32
105 AT4G31320 SAUR-like auxin-responsive protein family -0.59 0.32 -0.33
106 AT1G48840 Plant protein of unknown function (DUF639) 0.59 0.31 -0.28
107 AT4G29800 PATATIN-like protein 8 PLA IVD, PATATIN-like protein 8 -0.59 0.28 -0.32
108 AT5G27150 Na+/H+ exchanger 1 AT-NHX1, ATNHX, ATNHX1, Na+/H+
exchanger 1		 0.59 0.35 -0.32
109 AT3G03240 alpha/beta-Hydrolases superfamily protein 0.59 0.31 -0.32
110 AT4G22250 RING/U-box superfamily protein -0.59 0.31 -0.31
111 AT5G05550 sequence-specific DNA binding transcription factors 0.59 0.32 -0.3
112 AT4G15410 serine/threonine protein phosphatase 2A 55 kDa regulatory
subunit B prime gamma		 serine/threonine protein
phosphatase 2A 55 kDa regulatory
subunit B prime gamma		 -0.59 0.31 -0.35
113 AT1G52200 PLAC8 family protein -0.59 0.31 -0.3
114 AT5G24320 Transducin/WD40 repeat-like superfamily protein 0.59 0.31 -0.31
115 AT3G25840 Protein kinase superfamily protein 0.59 0.3 -0.32
116 AT4G22320 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G55210.1); Has 8953 Blast hits
to 5363 proteins in 542 species: Archae - 33; Bacteria -
806; Metazoa - 2454; Fungi - 831; Plants - 279; Viruses -
151; Other Eukaryotes - 4399 (source: NCBI BLink).		 -0.59 0.32 -0.33
117 AT2G01800 COP1-interacting protein-related -0.58 0.33 -0.32
118 AT5G06330 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.58 0.33 -0.32
119 AT2G04650 ADP-glucose pyrophosphorylase family protein -0.58 0.32 -0.31
120 AT1G12740 cytochrome P450, family 87, subfamily A, polypeptide 2 cytochrome P450, family 87,
subfamily A, polypeptide 2		 -0.58 0.3 -0.32
121 AT3G03160 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
intracellular protein transport; LOCATED IN: endomembrane
system, integral to membrane, endoplasmic reticulum;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: B-cell
receptor-associated 31-like (InterPro:IPR008417); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G17190.1); Has 102 Blast hits to 102 proteins in
17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.58 0.31 -0.29
122 AT2G41110 calmodulin 2 ATCAL5, calmodulin 2 -0.58 0.31 -0.31
123 AT4G01790 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.58 0.31 -0.3
124 AT3G23090 TPX2 (targeting protein for Xklp2) protein family -0.58 0.31 -0.32
125 AT3G03060 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.58 0.32 -0.31
126 AT4G17720 RNA-binding (RRM/RBD/RNP motifs) family protein -0.58 0.31 -0.29
127 AT5G22790 reticulata-related 1 reticulata-related 1 -0.58 0.32 -0.32
128 AT3G53880 NAD(P)-linked oxidoreductase superfamily protein Aldo-keto reductase family 4
member C11		 -0.57 0.32 -0.32
129 AT2G26940 C2H2-type zinc finger family protein -0.57 0.3 -0.34
130 AT2G45520 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; EXPRESSED IN: 23
plant structures; EXPRESSED DURING: 13 growth stages; Has
260 Blast hits to 238 proteins in 75 species: Archae - 0;
Bacteria - 6; Metazoa - 94; Fungi - 40; Plants - 38;
Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).		 -0.57 0.32 -0.31
131 AT1G48900 Signal recognition particle, SRP54 subunit protein -0.57 0.32 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
132 C0177 MST_2429.6 - - - 0.67 0.42 -0.45
133 C0193 Pantothenic acid D,L-Pantothenic acid Pantothenate pantothenate biosynthesis 0.65 0.48 -0.42 C0193