AT2G23310 : ATRER1C1
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT2G23310
Description Rer1 family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G23310 Rer1 family protein ATRER1C1 1 0.33 -0.32
2 AT2G30050 transducin family protein / WD-40 repeat family protein 0.78 0.32 -0.34
3 AT5G27820 Ribosomal L18p/L5e family protein 0.75 0.32 -0.3
4 AT4G25260 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.75 0.32 -0.31
5 AT3G26350 LOCATED IN: chloroplast; EXPRESSED IN: root, pedicel,
carpel, stamen; EXPRESSED DURING: 4 anthesis, petal
differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Late embryogenesis abundant protein, group 2
(InterPro:IPR004864); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G13050.1); Has 3534
Blast hits to 2704 proteins in 342 species: Archae - 6;
Bacteria - 192; Metazoa - 1076; Fungi - 505; Plants - 1162;
Viruses - 224; Other Eukaryotes - 369 (source: NCBI BLink).		 -0.75 0.32 -0.3
6 AT4G08420 transposable element gene 0.74 0.33 -0.33
7 AT3G04780 Protein of unknown function (DUF1000) 0.74 0.33 -0.31
8 AT3G06190 BTB-POZ and MATH domain 2 BTB-POZ AND MATH DOMAIN 2, BTB-POZ
and MATH domain 2		 0.74 0.34 -0.32
9 AT1G20200 PAM domain (PCI/PINT associated module) protein EMBRYO DEFECTIVE 2719, HAPLESS 15 0.74 0.32 -0.31
10 AT5G55940 Uncharacterised protein family (UPF0172) embryo defective 2731 0.74 0.34 -0.32
11 AT1G47280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, C globular stage, petal
differentiation and expansion stage; Has 6 Blast hits to 6
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.74 0.33 -0.32
12 AT3G53610 RAB GTPase homolog 8 RAB GTPase homolog 8, AtRab8B,
AtRABE1a, RAB GTPase homolog 8		 0.73 0.33 -0.32
13 AT5G43840 heat shock transcription factor A6A heat shock transcription factor
A6A, heat shock transcription
factor A6A		 -0.72 0.33 -0.32
14 AT5G04880 pseudogene of ABC transporter family protein -0.72 0.3 -0.33
15 AT1G73250 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1 ACTIVATING TRANSCRIPTION FACTOR 5,
GDP-4-keto-6-deoxymannose-3,5-epim
erase-4-reductase 1		 0.72 0.33 -0.31
16 AT1G16710 histone acetyltransferase of the CBP family 12 histone acetyltransferase of the
CBP family 12		 -0.72 0.32 -0.3
17 AT1G17870 ethylene-dependent gravitropism-deficient and
yellow-green-like 3		 ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3,
ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3		 -0.71 0.29 -0.32
18 AT5G41850 alpha/beta-Hydrolases superfamily protein -0.71 0.31 -0.33
19 AT2G39580 CONTAINS InterPro DOMAIN/s: Putative zinc-finger domain
(InterPro:IPR019607); Has 249 Blast hits to 219 proteins in
85 species: Archae - 0; Bacteria - 144; Metazoa - 29; Fungi
- 8; Plants - 50; Viruses - 0; Other Eukaryotes - 18
(source: NCBI BLink).		 -0.71 0.31 -0.31
20 AT3G55460 SC35-like splicing factor 30 SC35-like splicing factor 30,
SC35-like splicing factor 30		 0.71 0.31 -0.35
21 AT3G24790 Protein kinase superfamily protein -0.71 0.34 -0.33
22 AT1G10630 ADP-ribosylation factor A1F ADP-ribosylation factor A1F,
ADP-ribosylation factor A1F		 0.71 0.32 -0.32
23 AT5G63400 adenylate kinase 1 adenylate kinase 1 0.7 0.33 -0.31
24 AT2G43880 Pectin lyase-like superfamily protein 0.69 0.3 -0.32
25 AT5G25560 CHY-type/CTCHY-type/RING-type Zinc finger protein -0.69 0.33 -0.32
26 AT3G07000 Cysteine/Histidine-rich C1 domain family protein 0.69 0.32 -0.31
27 AT4G36980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Splicing factor, suppressor of white
apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479
proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa
- 5155; Fungi - 712; Plants - 341; Viruses - 39; Other
Eukaryotes - 1336 (source: NCBI BLink).		 -0.69 0.34 -0.32
28 AT1G77440 20S proteasome beta subunit C2 20S proteasome beta subunit C2 0.69 0.34 -0.33
29 AT1G55160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G19530.1); Has 63 Blast hits to 63 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.69 0.3 -0.29
30 AT3G58450 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.69 0.3 -0.36
31 AT1G50950 Thioredoxin protein with domain of unknown function
(DUF1692)		 -0.69 0.31 -0.36
32 AT3G17090 Protein phosphatase 2C family protein 0.69 0.3 -0.3
33 AT5G62490 HVA22 homologue B ARABIDOPSIS THALIANA HVA22
HOMOLOGUE B, HVA22 homologue B		 -0.68 0.32 -0.33
34 AT2G02660 F-box associated ubiquitination effector family protein 0.68 0.3 -0.33
35 AT2G19550 alpha/beta-Hydrolases superfamily protein -0.68 0.31 -0.3
36 AT5G07960 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0139
(InterPro:IPR005351); Has 193 Blast hits to 193 proteins in
75 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi
- 0; Plants - 52; Viruses - 0; Other Eukaryotes - 11
(source: NCBI BLink).		 0.68 0.3 -0.32
37 AT2G42560 late embryogenesis abundant domain-containing protein / LEA
domain-containing protein		 -0.68 0.32 -0.32
38 AT1G33400 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 9 -0.68 0.29 -0.3
39 AT3G05530 regulatory particle triple-A ATPase 5A ATS6A.2, regulatory particle
triple-A ATPase 5A		 0.68 0.3 -0.34
40 ATCG00070 photosystem II reaction center protein K precursor photosystem II reaction center
protein K precursor		 -0.67 0.3 -0.32
41 AT4G31320 SAUR-like auxin-responsive protein family 0.67 0.31 -0.31
42 AT2G26280 CTC-interacting domain 7 CTC-interacting domain 7 -0.67 0.31 -0.34
43 AT3G19920 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G64230.1); Has 217 Blast hits
to 217 proteins in 16 species: Archae - 0; Bacteria - 2;
Metazoa - 0; Fungi - 0; Plants - 215; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.67 0.34 -0.29
44 AT4G26260 myo-inositol oxygenase 4 myo-inositol oxygenase 4 0.67 0.32 -0.33
45 AT4G28540 casein kinase I-like 6 casein kinase I-like 6, PAPK1 0.67 0.32 -0.3
46 AT5G57500 Galactosyltransferase family protein 0.67 0.33 -0.29
47 AT2G22270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G39860.2); Has 247 Blast hits
to 231 proteins in 42 species: Archae - 0; Bacteria - 17;
Metazoa - 14; Fungi - 5; Plants - 145; Viruses - 0; Other
Eukaryotes - 66 (source: NCBI BLink).		 0.66 0.3 -0.29
48 AT2G17975 zinc finger (Ran-binding) family protein -0.66 0.3 -0.31
49 AT3G17520 Late embryogenesis abundant protein (LEA) family protein -0.66 0.31 -0.3
50 AT3G50010 Cysteine/Histidine-rich C1 domain family protein 0.66 0.34 -0.31
51 AT5G11640 Thioredoxin superfamily protein 0.66 0.36 -0.3
52 AT5G08440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G23490.1); Has 141 Blast
hits to 139 proteins in 35 species: Archae - 0; Bacteria -
9; Metazoa - 21; Fungi - 6; Plants - 94; Viruses - 0; Other
Eukaryotes - 11 (source: NCBI BLink).		 -0.66 0.31 -0.31
53 ATCG00080 photosystem II reaction center protein I photosystem II reaction center
protein I		 -0.66 0.31 -0.33
54 AT1G21580 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.66 0.3 -0.33
55 AT5G09790 ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 ARABIDOPSIS TRITHORAX-RELATED
PROTEIN 5, PIGMENT DEFECTIVE 336,
SETDOMAIN GROUP 15		 0.65 0.31 -0.3
56 AT4G27000 RNA-binding (RRM/RBD/RNP motifs) family protein ATRBP45C 0.65 0.32 -0.31
57 AT1G68920 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.65 0.3 -0.29
58 AT5G55390 ENHANCED DOWNY MILDEW 2 ENHANCED DOWNY MILDEW 2 -0.65 0.33 -0.34
59 AT1G09760 U2 small nuclear ribonucleoprotein A U2 small nuclear ribonucleoprotein
A		 0.65 0.32 -0.32
60 AT2G32600 hydroxyproline-rich glycoprotein family protein 0.65 0.33 -0.32
61 AT2G42370 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G58110.2); Has 205 Blast hits
to 191 proteins in 60 species: Archae - 3; Bacteria - 23;
Metazoa - 73; Fungi - 8; Plants - 34; Viruses - 0; Other
Eukaryotes - 64 (source: NCBI BLink).		 -0.65 0.29 -0.31
62 AT5G64710 Putative endonuclease or glycosyl hydrolase 0.65 0.31 -0.3
63 AT5G57080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 7 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G26055.1); Has 14 Blast hits to 14 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.65 0.33 -0.31
64 AT5G59030 copper transporter 1 copper transporter 1 0.65 0.31 -0.32
65 AT4G18410 transposable element gene -0.65 0.3 -0.29
66 AT1G11720 starch synthase 3 starch synthase 3, starch synthase
3		 -0.65 0.31 -0.31
67 AT5G02260 expansin A9 ATEXP9, expansin A9, ATHEXP ALPHA
1.10, EXP9, expansin A9		 0.64 0.32 -0.32
68 AT4G09520 Cofactor-independent phosphoglycerate mutase 0.64 0.31 -0.3
69 AT5G41940 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.64 0.32 -0.3
70 ATCG00740 RNA polymerase subunit alpha RNA polymerase subunit alpha -0.64 0.32 -0.32
71 AT4G04150 transposable element gene -0.64 0.29 -0.31
72 AT3G08850 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1B, RAPTOR1, RAPTOR1B -0.64 0.31 -0.33
73 AT5G45610 protein dimerizations SENSITIVE TO UV 2 -0.64 0.31 -0.31
74 AT5G05220 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.64 0.33 -0.29
75 AT5G18110 novel cap-binding protein novel cap-binding protein 0.64 0.31 -0.31
76 AT1G41900 transposable element gene -0.64 0.34 -0.32
77 AT3G12960 unknown protein; Has 44 Blast hits to 44 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.31 -0.31
78 AT1G52240 RHO guanyl-nucleotide exchange factor 11 ATROPGEF11, phytochrome
interacting RopGEF 1, RHO
guanyl-nucleotide exchange factor
11		 0.64 0.3 -0.29
79 AT2G15860 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.64 0.29 -0.34
80 AT1G09150 pseudouridine synthase and archaeosine transglycosylase
(PUA) domain-containing protein		 0.64 0.33 -0.33
81 AT1G63490 transcription factor jumonji (jmjC) domain-containing
protein		 -0.63 0.29 -0.32
82 AT3G17290 transposable element gene -0.63 0.32 -0.34
83 AT1G52570 phospholipase D alpha 2 phospholipase D alpha 2 -0.63 0.31 -0.31
84 AT1G34280 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.63 0.29 -0.31
85 AT4G17010 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.63 0.31 -0.31
86 AT2G10050 transposable element gene -0.63 0.31 -0.3
87 AT4G39560 Galactose oxidase/kelch repeat superfamily protein -0.63 0.31 -0.33
88 AT3G17980 Calcium-dependent lipid-binding (CaLB domain) family
protein		 Arabidopsis thaliana C2 domain, C2
domain		 -0.63 0.31 -0.34
89 AT1G09550 Pectinacetylesterase family protein -0.63 0.33 -0.32
90 AT1G07020 unknown protein; Has 39 Blast hits to 39 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 3;
Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.63 0.31 -0.31
91 AT1G48220 Protein kinase superfamily protein -0.63 0.3 -0.31
92 AT1G30950 F-box family protein UNUSUAL FLORAL ORGANS -0.63 0.32 -0.32
93 AT1G66750 CDK-activating kinase 4 AT;CDKD;2, CDK-activating kinase
4, CDK-ACTIVATING KINASE 4,
CYCLIN-DEPENDENT KINASE D1;2,
CDKD;2		 0.63 0.32 -0.34
94 AT5G06700 Plant protein of unknown function (DUF828) TBR, TRICHOME BIREFRINGENCE 0.63 0.31 -0.3
95 AT5G62800 Protein with RING/U-box and TRAF-like domains -0.62 0.32 -0.31
96 AT5G20840 Phosphoinositide phosphatase family protein -0.62 0.3 -0.33
97 AT5G45090 phloem protein 2-A7 phloem protein 2-A7, phloem
protein 2-A7		 -0.62 0.31 -0.31
98 AT3G16220 Predicted eukaryotic LigT -0.62 0.3 -0.34
99 AT1G80800 pseudogene, 40S ribosomal protein S12 (RPS12B), similar to
ribosomal protein S12 GB:AAD39838 GI:5106775 from (Hordeum
vulgare); blastp match of 65% identity and 4.7e-12 P-value
to GP|23617253|dbj|BAC20920.1||AP005764 putative 40S
ribosomal protein S12 {Oryza sativa (japonica
cultivar-group)}		 -0.62 0.33 -0.3
100 AT2G27980 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 -0.62 0.31 -0.33
101 AT2G21490 dehydrin LEA dehydrin LEA -0.62 0.3 -0.3
102 AT5G59040 copper transporter 3 copper transporter 3 -0.61 0.33 -0.31
103 AT3G29390 RS2-interacting KH protein RS2-interacting KH protein -0.61 0.32 -0.3
104 AT5G65820 Pentatricopeptide repeat (PPR) superfamily protein -0.61 0.33 -0.31
105 AT5G27530 Pectin lyase-like superfamily protein -0.61 0.3 -0.31
106 AT3G55850 Amidohydrolase family LONG AFTER FAR-RED 3, LONG AFTER
FAR-RED 3 ISOFORM 1, LAF3 ISOFORM
2		 -0.61 0.34 -0.3
107 AT4G30570 Glucose-1-phosphate adenylyltransferase family protein -0.6 0.34 -0.3
108 AT4G04165 transposable element gene -0.6 0.32 -0.34
109 AT4G20490 transposable element gene -0.6 0.31 -0.31
110 AT1G43970 unknown protein; Has 10 Blast hits to 8 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.31 -0.31
111 AT3G22490 Seed maturation protein -0.6 0.33 -0.31
112 AT5G21110 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.33 -0.32
113 AT5G07050 nodulin MtN21 /EamA-like transporter family protein -0.6 0.32 -0.31
114 AT5G59800 methyl-CPG-binding domain 7 ARABIDOPSIS THALIANA
METHYL-CPG-BINDING DOMAIN 7,
methyl-CPG-binding domain 7		 -0.6 0.3 -0.31
115 AT2G37880 Protein of unknown function, DUF617 -0.6 0.29 -0.32
116 AT3G43760 transposable element gene -0.6 0.31 -0.34
117 AT2G13500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G41590.1); Has 126 Blast hits
to 126 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 126; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.32 -0.32
118 AT4G14510 CRM family member 3B ATCFM3B, CRM family member 3B -0.59 0.32 -0.28
119 AT5G15540 PHD finger family protein ARABIDOPSIS THALIANA
SISTER-CHROMATID COHESION 2,
EMBRYO DEFECTIVE 2773,
SISTER-CHROMATID COHESION 2		 -0.59 0.31 -0.32
120 AT5G19660 SITE-1 protease SITE-1 PROTEASE, ATSBT6.1, SITE-1
protease		 -0.59 0.32 -0.3
121 ATCG00770 ribosomal protein S8 ribosomal protein S8 -0.59 0.34 -0.3
122 AT2G27120 DNA polymerase epsilon catalytic subunit POL2B, TILTED 2 -0.59 0.3 -0.32
123 AT5G29040 pseudogene, hypothetical protein -0.59 0.31 -0.31
124 AT4G33870 Peroxidase superfamily protein -0.59 0.31 -0.33
125 AT2G07650 transposable element gene -0.59 0.31 -0.32
126 AT5G62400 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.31 -0.3
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
127 C0228 Ribose-5-phosphate D-Ribose-5-phosphate D-Ribose-5-phosphate PRPP biosynthesis I,
Calvin-Benson-Bassham cycle,
trans-zeatin biosynthesis,
pentose phosphate pathway (non-oxidative branch),
pyridine nucleotide cycling (plants),
Rubisco shunt,
ribose degradation,
pyridoxal 5'-phosphate biosynthesis II 		0.79 0.43 -0.45 C0228