AGICode | AT2G39810 |
Description | ubiquitin-protein ligases |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G39810 | ubiquitin-protein ligases | HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 |
1 | 0.3 | -0.3 | ||
2 | AT4G32420 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
0.8 | 0.33 | -0.32 | |||
3 | AT1G48650 | DEA(D/H)-box RNA helicase family protein | 0.75 | 0.3 | -0.3 | |||
4 | AT2G25280 | CONTAINS InterPro DOMAIN/s: UPF0103/Mediator of ErbB2-driven cell motility (Memo), related (InterPro:IPR002737); Has 1074 Blast hits to 1072 proteins in 474 species: Archae - 213; Bacteria - 366; Metazoa - 159; Fungi - 135; Plants - 54; Viruses - 0; Other Eukaryotes - 147 (source: NCBI BLink). |
-0.74 | 0.31 | -0.3 | |||
5 | AT5G13760 | Plasma-membrane choline transporter family protein | -0.73 | 0.28 | -0.31 | |||
6 | AT1G51940 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein |
0.73 | 0.32 | -0.32 | |||
7 | AT1G64200 | vacuolar H+-ATPase subunit E isoform 3 | vacuolar H+-ATPase subunit E isoform 3 |
-0.71 | 0.31 | -0.32 | ||
8 | AT3G10260 | Reticulon family protein | -0.7 | 0.3 | -0.33 | |||
9 | AT3G10180 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.7 | 0.31 | -0.31 | |||
10 | AT1G08840 | DNA replication helicase, putative | embryo defective 2411 | 0.68 | 0.32 | -0.32 | ||
11 | AT5G26600 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein |
-0.68 | 0.33 | -0.3 | |||
12 | AT1G77420 | alpha/beta-Hydrolases superfamily protein | -0.68 | 0.31 | -0.33 | |||
13 | AT4G15415 | Protein phosphatase 2A regulatory B subunit family protein | ATB' GAMMA | 0.67 | 0.32 | -0.31 | ||
14 | AT1G71710 | DNAse I-like superfamily protein | 0.67 | 0.32 | -0.32 | |||
15 | AT5G09880 | Splicing factor, CC1-like | 0.67 | 0.32 | -0.3 | |||
16 | AT1G14120 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.65 | 0.28 | -0.33 | |||
17 | AT1G69370 | chorismate mutase 3 | cm-3, chorismate mutase 3 | -0.64 | 0.31 | -0.35 | ||
18 | AT4G15093 | catalytic LigB subunit of aromatic ring-opening dioxygenase family |
-0.64 | 0.3 | -0.33 | |||
19 | AT5G67570 | Tetratricopeptide repeat (TPR)-like superfamily protein | DELAYED GREENING 1, embryo defective 1408, EMBRYO DEFECTIVE 246 |
0.64 | 0.3 | -0.33 | ||
20 | AT5G38510 | Rhomboid-related intramembrane serine protease family protein |
0.64 | 0.33 | -0.32 | |||
21 | AT1G73350 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 46 Blast hits to 46 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 3; Plants - 36; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
0.64 | 0.34 | -0.31 | |||
22 | AT5G56740 | histone acetyltransferase of the GNAT family 2 | HAC07, HAC7, HAG02, histone acetyltransferase of the GNAT family 2 |
0.64 | 0.3 | -0.31 | ||
23 | AT5G62930 | SGNH hydrolase-type esterase superfamily protein | -0.63 | 0.32 | -0.31 | |||
24 | AT2G24550 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31510.1); Has 219 Blast hits to 219 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 2; Plants - 184; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). |
-0.63 | 0.33 | -0.31 | |||
25 | AT3G53180 | glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases |
nodulin/glutamine synthase-like protein |
-0.63 | 0.33 | -0.32 | ||
26 | AT5G07860 | HXXXD-type acyl-transferase family protein | -0.62 | 0.36 | -0.32 | |||
27 | AT4G01897 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF952 (InterPro:IPR009297); Has 763 Blast hits to 763 proteins in 180 species: Archae - 0; Bacteria - 351; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 383 (source: NCBI BLink). |
-0.62 | 0.32 | -0.31 | |||
28 | AT5G45400 | Replication factor-A protein 1-related | ATRPA70C, RPA70C | 0.62 | 0.32 | -0.29 | ||
29 | AT4G04610 | APS reductase 1 | APR, APS reductase 1, ATAPR1, PAPS REDUCTASE HOMOLOG 19 |
-0.62 | 0.32 | -0.31 | ||
30 | AT2G29210 | splicing factor PWI domain-containing protein | 0.62 | 0.32 | -0.3 | |||
31 | AT4G31880 | LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1); Has 137162 Blast hits to 70781 proteins in 2973 species: Archae - 289; Bacteria - 24182; Metazoa - 56725; Fungi - 20130; Plants - 6559; Viruses - 758; Other Eukaryotes - 28519 (source: NCBI BLink). |
0.62 | 0.32 | -0.33 | |||
32 | AT2G28540 | RNA binding (RRM/RBD/RNP motifs) family protein | 0.61 | 0.3 | -0.3 | |||
33 | AT1G31430 | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.61 | 0.33 | -0.3 | |||
34 | AT3G17030 | Nucleic acid-binding proteins superfamily | 0.61 | 0.32 | -0.34 | |||
35 | AT4G30530 | Class I glutamine amidotransferase-like superfamily protein | gamma-glutamyl peptidase 1 | -0.61 | 0.31 | -0.32 | ||
36 | AT1G62200 | Major facilitator superfamily protein | AtPTR6, peptide transporter 6 | -0.61 | 0.31 | -0.31 | ||
37 | AT2G34690 | Glycolipid transfer protein (GLTP) family protein | ACCELERATED CELL DEATH 11 | -0.61 | 0.32 | -0.31 | ||
38 | AT3G22890 | ATP sulfurylase 1 | ATP sulfurylase 1 | -0.6 | 0.33 | -0.3 | ||
39 | AT1G12240 | Glycosyl hydrolases family 32 protein | ATBETAFRUCT4, VACUOLAR INVERTASE | -0.6 | 0.32 | -0.32 | ||
40 | AT1G19670 | chlorophyllase 1 | chlorophyllase 1, CORONATINE-INDUCED PROTEIN 1, chlorophyllase 1, CORONATINE-INDUCED PROTEIN 1 |
-0.59 | 0.34 | -0.34 | ||
41 | AT4G29700 | Alkaline-phosphatase-like family protein | -0.59 | 0.31 | -0.33 | |||
42 | AT2G16880 | Pentatricopeptide repeat (PPR) superfamily protein | 0.59 | 0.32 | -0.32 | |||
43 | AT5G18900 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.59 | 0.3 | -0.31 | |||
44 | AT5G11810 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.59 | 0.32 | -0.32 | |||
45 | AT4G17150 | alpha/beta-Hydrolases superfamily protein | 0.58 | 0.3 | -0.32 | |||
46 | AT2G21300 | ATP binding microtubule motor family protein | 0.58 | 0.32 | -0.3 | |||
47 | AT2G35510 | similar to RCD one 1 | similar to RCD one 1 | 0.58 | 0.33 | -0.31 | ||
48 | AT3G27340 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 1035 Blast hits to 1035 proteins in 399 species: Archae - 0; Bacteria - 765; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink). |
-0.58 | 0.3 | -0.31 | |||
49 | AT4G23860 | PHD finger protein-related | 0.58 | 0.31 | -0.29 | |||
50 | AT5G54390 | HAL2-like | HAL2-like, ATAHL, HAL2-like | -0.57 | 0.31 | -0.3 | ||
51 | AT1G24100 | UDP-glucosyl transferase 74B1 | UDP-glucosyl transferase 74B1 | -0.56 | 0.33 | -0.3 | ||
52 | AT4G14680 | Pseudouridine synthase/archaeosine transglycosylase-like family protein |
APS3 | -0.56 | 0.32 | -0.31 |