AGICode | AT2G45420 |
Description | LOB domain-containing protein 18 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G45420 | LOB domain-containing protein 18 | LOB domain-containing protein 18 | 1 | 0.34 | -0.33 | ||
2 | AT5G01870 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.69 | 0.32 | -0.3 | |||
3 | AT4G13195 | CLAVATA3/ESR-RELATED 44 | CLAVATA3/ESR-RELATED 44 | 0.69 | 0.3 | -0.31 | ||
4 | AT1G08430 | aluminum-activated malate transporter 1 | aluminum-activated malate transporter 1, ARABIDOPSIS THALIANA ALUMINUM-ACTIVATED MALATE TRANSPORTER 1 |
0.69 | 0.3 | -0.33 | ||
5 | AT1G23340 | Protein of Unknown Function (DUF239) | 0.68 | 0.3 | -0.31 | |||
6 | AT5G50260 | Cysteine proteinases superfamily protein | cysteine endopeptidase 1 | 0.68 | 0.32 | -0.3 | ||
7 | AT1G79580 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein |
Arabidopsis NAC domain containing protein 33, SOMBRERO |
0.67 | 0.3 | -0.32 | ||
8 | AT5G10510 | AINTEGUMENTA-like 6 | AINTEGUMENTA-like 6, PLETHORA 3 | 0.67 | 0.31 | -0.3 | ||
9 | AT4G12910 | serine carboxypeptidase-like 20 | serine carboxypeptidase-like 20 | 0.67 | 0.34 | -0.33 | ||
10 | AT5G10850 | transposable element gene | 0.66 | 0.31 | -0.32 | |||
11 | AT4G08150 | KNOTTED-like from Arabidopsis thaliana | BREVIPEDICELLUS, BREVIPEDICELLUS 1, KNOTTED-like from Arabidopsis thaliana |
0.65 | 0.3 | -0.32 | ||
12 | AT5G17430 | Integrase-type DNA-binding superfamily protein | BABY BOOM | 0.65 | 0.29 | -0.31 | ||
13 | AT2G46950 | cytochrome P450, family 709, subfamily B, polypeptide 2 | cytochrome P450, family 709, subfamily B, polypeptide 2 |
0.65 | 0.33 | -0.32 | ||
14 | AT3G21770 | Peroxidase superfamily protein | 0.64 | 0.32 | -0.31 | |||
15 | AT1G71870 | MATE efflux family protein | 0.64 | 0.31 | -0.3 | |||
16 | AT1G23010 | Cupredoxin superfamily protein | Low Phosphate Root1 | 0.64 | 0.31 | -0.3 | ||
17 | AT2G33310 | auxin-induced protein 13 | auxin-induced protein 13 | 0.63 | 0.3 | -0.31 | ||
18 | AT3G44540 | fatty acid reductase 4 | fatty acid reductase 4 | 0.63 | 0.3 | -0.31 | ||
19 | AT1G47990 | gibberellin 2-oxidase 4 | Arabidopsis thaliana gibberellin 2-oxidase 4, gibberellin 2-oxidase 4 |
0.63 | 0.33 | -0.32 | ||
20 | AT2G47260 | WRKY DNA-binding protein 23 | WRKY DNA-BINDING PROTEIN 23, WRKY DNA-binding protein 23 |
0.63 | 0.31 | -0.3 | ||
21 | AT2G03830 | Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). |
root meristem growth factor 8 | 0.62 | 0.31 | -0.3 | ||
22 | AT3G10010 | demeter-like 2 | demeter-like 2 | -0.62 | 0.33 | -0.3 | ||
23 | AT2G05910 | Protein of unknown function (DUF567) | 0.62 | 0.33 | -0.33 | |||
24 | AT5G14130 | Peroxidase superfamily protein | 0.62 | 0.31 | -0.31 | |||
25 | AT1G78100 | F-box family protein | auxin up-regulated f-box protein 1 | 0.61 | 0.31 | -0.32 | ||
26 | AT5G02640 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.61 | 0.33 | -0.3 | |||
27 | AT4G31730 | glutamine dumper 1 | glutamine dumper 1 | 0.61 | 0.31 | -0.3 | ||
28 | AT4G37650 | GRAS family transcription factor | SHOOT GRAVITROPISM 7, SHORT ROOT | 0.61 | 0.3 | -0.31 | ||
29 | AT4G16370 | oligopeptide transporter | oligopeptide transporter, OPT3, oligopeptide transporter |
-0.61 | 0.3 | -0.31 | ||
30 | AT5G18560 | Integrase-type DNA-binding superfamily protein | PUCHI | 0.61 | 0.32 | -0.31 | ||
31 | AT4G36740 | homeobox protein 40 | homeobox protein 40, HB-5, homeobox protein 40 |
0.6 | 0.31 | -0.32 | ||
32 | AT1G73590 | Auxin efflux carrier family protein | ARABIDOPSIS THALIANA PIN-FORMED 1, PIN-FORMED 1 |
0.6 | 0.32 | -0.3 | ||
33 | AT1G24430 | HXXXD-type acyl-transferase family protein | 0.6 | 0.29 | -0.31 | |||
34 | AT2G21080 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3537 (InterPro:IPR021924); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3537) (TAIR:AT3G20300.1); Has 141 Blast hits to 141 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 140; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
-0.59 | 0.33 | -0.31 | |||
35 | AT5G48650 | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain |
0.59 | 0.32 | -0.33 | |||
36 | AT5G39760 | homeobox protein 23 | homeobox protein 23, homeobox protein 23, ZINC FINGER HOMEODOMAIN 10 |
-0.59 | 0.3 | -0.32 | ||
37 | AT4G15880 | Cysteine proteinases superfamily protein | ATESD4, EARLY IN SHORT DAYS 4 | -0.58 | 0.3 | -0.3 | ||
38 | AT3G28970 | Domain of unknown function (DUF298) | antiauxin-resistant 3 | -0.58 | 0.32 | -0.32 | ||
39 | AT3G28680 | Serine carboxypeptidase S28 family protein | -0.58 | 0.32 | -0.31 | |||
40 | AT2G25520 | Drug/metabolite transporter superfamily protein | 0.58 | 0.3 | -0.31 | |||
41 | AT1G55740 | seed imbibition 1 | seed imbibition 1, raffinose synthase 1, seed imbibition 1 |
0.58 | 0.32 | -0.33 | ||
42 | AT5G03390 | Protein of unknown function (DUF295) | -0.57 | 0.32 | -0.3 | |||
43 | AT1G01030 | AP2/B3-like transcriptional factor family protein | NGATHA3 | -0.57 | 0.3 | -0.34 | ||
44 | AT5G10720 | histidine kinase 5 | histidine kinase 5, CYTOKININ INDEPENDENT 2, histidine kinase 5 |
0.57 | 0.31 | -0.34 | ||
45 | AT5G23530 | carboxyesterase 18 | carboxyesterase 18, carboxyesterase 18 |
0.57 | 0.3 | -0.33 | ||
46 | AT1G60870 | maternal effect embryo arrest 9 | maternal effect embryo arrest 9 | -0.56 | 0.31 | -0.3 | ||
47 | AT2G17620 | Cyclin B2;1 | Cyclin B2;1 | 0.56 | 0.3 | -0.32 | ||
48 | AT5G39390 | Leucine-rich repeat protein kinase family protein | -0.56 | 0.29 | -0.3 | |||
49 | AT1G26820 | ribonuclease 3 | ribonuclease 3 | 0.56 | 0.32 | -0.31 | ||
50 | AT1G74940 | Protein of unknown function (DUF581) | -0.56 | 0.32 | -0.3 | |||
51 | AT4G14965 | membrane-associated progesterone binding protein 4 | membrane-associated progesterone binding protein 4, membrane-associated progesterone binding protein 4 |
-0.56 | 0.33 | -0.31 | ||
52 | AT3G22860 | eukaryotic translation initiation factor 3 subunit C2 | ATEIF3C-2, ATTIF3C2, EUKARYOTIC INITIATION FACTOR 3C-2, eukaryotic translation initiation factor 3 subunit C2 |
-0.56 | 0.31 | -0.32 | ||
53 | AT5G04000 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.55 | 0.33 | -0.31 | |||
54 | AT3G15280 | unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, 4 anthesis, petal differentiation and expansion stage; Has 36 Blast hits to 36 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.55 | 0.31 | -0.33 | |||
55 | AT5G53890 | phytosylfokine-alpha receptor 2 | AtPSKR2, phytosylfokine-alpha receptor 2 |
0.55 | 0.32 | -0.33 | ||
56 | AT3G54250 | GHMP kinase family protein | 0.55 | 0.31 | -0.32 | |||
57 | AT4G15590 | transposable element gene | -0.55 | 0.34 | -0.31 | |||
58 | AT3G46970 | alpha-glucan phosphorylase 2 | Arabidopsis thaliana alpha-glucan phosphorylase 2, alpha-glucan phosphorylase 2 |
-0.55 | 0.33 | -0.31 | ||
59 | AT2G47860 | Phototropic-responsive NPH3 family protein | SETH6 | 0.55 | 0.32 | -0.31 | ||
60 | AT4G17220 | microtubule-associated proteins 70-5 | microtubule-associated proteins 70-5, microtubule-associated proteins 70-5 |
0.55 | 0.31 | -0.34 | ||
61 | AT3G03090 | vacuolar glucose transporter 1 | vacuolar glucose transporter 1, vacuolar glucose transporter 1 |
-0.55 | 0.32 | -0.31 | ||
62 | AT4G08590 | ORTHRUS-like | ORTH-LIKE 1, ORTHRUS-LIKE 1, ORTHRUS-like, VARIANT IN METHYLATION 6 |
0.55 | 0.33 | -0.31 | ||
63 | AT4G18425 | Protein of unknown function (DUF679) | 0.55 | 0.3 | -0.3 | |||
64 | AT2G43160 | ENTH/VHS family protein | -0.54 | 0.33 | -0.33 | |||
65 | AT5G62650 | Tic22-like family protein | -0.54 | 0.31 | -0.31 | |||
66 | AT1G47465 | transposable element gene | -0.54 | 0.33 | -0.32 | |||
67 | AT1G09810 | evolutionarily conserved C-terminal region 11 | evolutionarily conserved C-terminal region 11 |
-0.54 | 0.33 | -0.3 | ||
68 | AT3G14000 | DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein |
ATBRXL2, BRX-LIKE2 | 0.53 | 0.33 | -0.32 | ||
69 | AT5G35580 | Protein kinase superfamily protein | 0.53 | 0.29 | -0.29 | |||
70 | AT4G24530 | O-fucosyltransferase family protein | -0.53 | 0.32 | -0.31 | |||
71 | AT5G55090 | mitogen-activated protein kinase kinase kinase 15 | mitogen-activated protein kinase kinase kinase 15 |
-0.53 | 0.33 | -0.31 | ||
72 | AT3G09970 | Calcineurin-like metallo-phosphoesterase superfamily protein |
-0.52 | 0.31 | -0.33 | |||
73 | AT1G53430 | Leucine-rich repeat transmembrane protein kinase | -0.52 | 0.32 | -0.3 | |||
74 | AT1G55430 | Cysteine/Histidine-rich C1 domain family protein | 0.52 | 0.32 | -0.35 | |||
75 | AT5G60120 | target of early activation tagged (EAT) 2 | target of early activation tagged (EAT) 2 |
0.52 | 0.32 | -0.32 | ||
76 | AT1G23420 | Plant-specific transcription factor YABBY family protein | INNER NO OUTER | -0.52 | 0.3 | -0.33 | ||
77 | AT5G23220 | nicotinamidase 3 | nicotinamidase 3 | 0.52 | 0.3 | -0.31 | ||
78 | AT2G14095 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; Has 106 Blast hits to 103 proteins in 21 species: Archae - 0; Bacteria - 5; Metazoa - 0; Fungi - 4; Plants - 87; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). |
0.52 | 0.3 | -0.31 | |||
79 | AT5G25890 | indole-3-acetic acid inducible 28 | indole-3-acetic acid inducible 28, IAA-ALANINE RESISTANT 2 |
0.52 | 0.3 | -0.32 | ||
80 | AT5G43690 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.52 | 0.31 | -0.3 | |||
81 | AT4G36870 | BEL1-like homeodomain 2 | BEL1-like homeodomain 2, SAWTOOTH 1 |
-0.51 | 0.31 | -0.32 | ||
82 | AT1G62500 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.51 | 0.31 | -0.32 | |||
83 | AT3G26200 | cytochrome P450, family 71, subfamily B, polypeptide 22 | cytochrome P450, family 71, subfamily B, polypeptide 22 |
-0.51 | 0.31 | -0.33 | ||
84 | AT1G34440 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05095.1); Has 28 Blast hits to 28 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.51 | 0.31 | -0.3 | |||
85 | AT1G51480 | Disease resistance protein (CC-NBS-LRR class) family | -0.51 | 0.32 | -0.3 | |||
86 | AT1G79430 | Homeodomain-like superfamily protein | ALTERED PHLOEM DEVELOPMENT, WOODY | -0.51 | 0.32 | -0.31 | ||
87 | AT3G26935 | DHHC-type zinc finger family protein | -0.5 | 0.33 | -0.32 | |||
88 | AT4G03080 | BRI1 suppressor 1 (BSU1)-like 1 | BRI1 suppressor 1 (BSU1)-like 1 | -0.5 | 0.32 | -0.3 | ||
89 | AT1G51310 | transferases;tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferases |
-0.5 | 0.3 | -0.3 | |||
90 | AT3G04910 | with no lysine (K) kinase 1 | ATWNK1, with no lysine (K) kinase 1, ZIK4 |
-0.5 | 0.34 | -0.31 | ||
91 | AT1G17120 | cationic amino acid transporter 8 | cationic amino acid transporter 8 | -0.49 | 0.31 | -0.31 | ||
92 | AT1G13070 | putative cytochrome P450 | cytochrome P450, family 71, subfamily B, polypeptide 27 |
-0.49 | 0.3 | -0.32 | ||
93 | AT1G07060 | unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.49 | 0.3 | -0.33 | |||
94 | AT4G02670 | indeterminate(ID)-domain 12 | indeterminate(ID)-domain 12, indeterminate(ID)-domain 12 |
-0.49 | 0.3 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
95 | C0196 | Phosphatidylcholine-34:3 | - | Phosphatidylcholine-34:3 | choline biosynthesis III, diacylglycerol biosynthesis, phospholipases, triacylglycerol biosynthesis, linoleate biosynthesis I, phosphatidylcholine biosynthesis III, glutathione redox reactions I |
-0.55 | 0.48 | -0.46 |