AT5G12410 : -
Query Information
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AGICode AT5G12410
Description THUMP domain-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G12410 THUMP domain-containing protein 1 0.32 -0.33
2 AT1G14620 decoy DECOY 0.82 0.32 -0.3
3 AT4G23620 Ribosomal protein L25/Gln-tRNA synthetase,
anti-codon-binding domain		 0.82 0.34 -0.3
4 AT1G07830 ribosomal protein L29 family protein 0.81 0.3 -0.32
5 AT3G23830 glycine-rich RNA-binding protein 4 AtGRP4, GR-RBP4, glycine-rich
RNA-binding protein 4		 0.81 0.34 -0.31
6 AT1G02870 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Ribosome biogenesis protein Nop16
(InterPro:IPR019002); Has 104 Blast hits to 104 proteins in
57 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
63; Plants - 35; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.81 0.33 -0.3
7 AT5G04600 RNA-binding (RRM/RBD/RNP motifs) family protein 0.8 0.32 -0.3
8 AT5G56500 TCP-1/cpn60 chaperonin family protein chaperonin-60beta3 0.79 0.32 -0.31
9 AT1G02900 rapid alkalinization factor 1 RAPID ALKALINIZATION FACTOR 1,
rapid alkalinization factor 1,
RALF-LIKE 1		 0.79 0.33 -0.3
10 AT4G30930 Ribosomal protein L21 NUCLEAR FUSION DEFECTIVE 1 0.79 0.31 -0.32
11 AT1G72730 DEA(D/H)-box RNA helicase family protein 0.79 0.3 -0.32
12 AT1G04870 protein arginine methyltransferase 10 ATPRMT10, protein arginine
methyltransferase 10		 0.77 0.32 -0.31
13 AT5G62290 nucleotide-sensitive chloride conductance regulator (ICln)
family protein		 0.77 0.32 -0.31
14 AT5G64680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 114 Blast hits to 110
proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa -
42; Fungi - 10; Plants - 37; Viruses - 0; Other Eukaryotes
- 25 (source: NCBI BLink).		 0.76 0.3 -0.32
15 AT5G48070 xyloglucan endotransglucosylase/hydrolase 20 XYLOGLUCAN
ENDOTRANSGLUCOSYLASE/HYDROLASE 20,
xyloglucan
endotransglucosylase/hydrolase 20		 0.76 0.31 -0.3
16 AT4G31320 SAUR-like auxin-responsive protein family 0.76 0.33 -0.32
17 AT3G17465 ribosomal protein L3 plastid ribosomal protein L3 plastid 0.76 0.31 -0.3
18 AT4G37090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.76 0.31 -0.3
19 AT2G47140 NAD(P)-binding Rossmann-fold superfamily protein AtSDR5, short-chain dehydrogenase
reductase 5		 0.76 0.3 -0.31
20 AT4G15640 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G21465.1); Has 38 Blast hits
to 38 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.76 0.3 -0.31
21 AT5G03650 starch branching enzyme 2.2 starch branching enzyme 2.2 -0.76 0.33 -0.33
22 AT3G01790 Ribosomal protein L13 family protein 0.76 0.32 -0.35
23 AT1G25260 Ribosomal protein L10 family protein 0.75 0.31 -0.33
24 AT2G21045 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.75 0.32 -0.3
25 AT3G13160 Tetratricopeptide repeat (TPR)-like superfamily protein 0.74 0.33 -0.33
26 AT4G35050 Transducin family protein / WD-40 repeat family protein MULTICOPY SUPPRESSOR OF IRA1 3,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP C 3		 0.74 0.31 -0.32
27 AT5G15750 Alpha-L RNA-binding motif/Ribosomal protein S4 family
protein		 0.74 0.32 -0.31
28 AT1G11720 starch synthase 3 starch synthase 3, starch synthase
3		 -0.74 0.31 -0.32
29 AT3G57360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G02370.2); Has 122 Blast hits
to 122 proteins in 54 species: Archae - 0; Bacteria - 0;
Metazoa - 74; Fungi - 4; Plants - 41; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 0.73 0.32 -0.31
30 AT5G09270 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.73 0.32 -0.31
31 AT5G53770 Nucleotidyltransferase family protein 0.73 0.32 -0.32
32 AT5G13780 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.73 0.34 -0.33
33 AT5G16930 AAA-type ATPase family protein 0.73 0.33 -0.3
34 AT3G18940 clast3-related 0.73 0.32 -0.3
35 AT1G63240 unknown protein; Has 460 Blast hits to 413 proteins in 106
species: Archae - 5; Bacteria - 12; Metazoa - 152; Fungi -
46; Plants - 43; Viruses - 2; Other Eukaryotes - 200
(source: NCBI BLink).		 -0.73 0.3 -0.3
36 AT1G05200 glutamate receptor 3.4 glutamate receptor 3.4, glutamate
receptor 3.4, GLUR3		 -0.73 0.31 -0.32
37 AT5G63660 Scorpion toxin-like knottin superfamily protein LOW-MOLECULAR-WEIGHT CYSTEINE-RICH
74, PDF2.5		 0.73 0.31 -0.31
38 AT2G36290 alpha/beta-Hydrolases superfamily protein 0.73 0.3 -0.34
39 AT2G36100 Uncharacterised protein family (UPF0497) Casparian strip membrane domain
protein 1		 0.73 0.32 -0.33
40 AT1G15480 Tetratricopeptide repeat (TPR)-like superfamily protein 0.72 0.32 -0.32
41 AT5G47680 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA
(guanine-N1-)-methyltransferase (InterPro:IPR016009), tRNA
(guanine-N(1)-)-methyltransferase, metazoa
(InterPro:IPR016653), tRNA (guanine-N1-)-methyltransferase,
eukaryotic (InterPro:IPR007356); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 AtTRM, tRNA modification 10 0.72 0.3 -0.33
42 AT5G40200 DegP protease 9 DegP protease 9 0.72 0.33 -0.33
43 AT4G23690 Disease resistance-responsive (dirigent-like protein)
family protein		 0.72 0.32 -0.33
44 AT5G61030 glycine-rich RNA-binding protein 3 glycine-rich RNA-binding protein 3 0.72 0.31 -0.32
45 AT2G36930 zinc finger (C2H2 type) family protein 0.72 0.34 -0.3
46 AT4G30170 Peroxidase family protein 0.72 0.32 -0.3
47 AT5G25220 KNOTTED1-like homeobox gene 3 KNOTTED1-like homeobox gene 3 -0.72 0.33 -0.29
48 AT1G23100 GroES-like family protein 0.71 0.32 -0.31
49 AT5G46880 homeobox-7 homeobox-7, HOMEODOMAIN GLABROUS 5 -0.71 0.29 -0.32
50 AT1G19715 Mannose-binding lectin superfamily protein -0.71 0.31 -0.34
51 AT3G07750 3'-5'-exoribonuclease family protein 0.71 0.35 -0.3
52 AT5G46840 RNA-binding (RRM/RBD/RNP motifs) family protein 0.71 0.32 -0.32
53 AT3G59090 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana
protein match is: tobamovirus multiplication 1
(TAIR:AT4G21790.1); Has 196 Blast hits to 195 proteins in
29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
2; Plants - 188; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 -0.71 0.32 -0.29
54 AT5G17330 glutamate decarboxylase glutamate decarboxylase, GLUTAMATE
DECARBOXYLASE 1		 0.71 0.33 -0.31
55 AT2G25980 Mannose-binding lectin superfamily protein 0.71 0.31 -0.32
56 AT1G29280 WRKY DNA-binding protein 65 WRKY DNA-BINDING PROTEIN 65, WRKY
DNA-binding protein 65		 0.71 0.31 -0.31
57 AT4G02930 GTP binding Elongation factor Tu family protein 0.71 0.33 -0.32
58 AT3G11830 TCP-1/cpn60 chaperonin family protein 0.71 0.3 -0.32
59 AT1G73940 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G49410.2); Has 54 Blast hits
to 54 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.7 0.33 -0.33
60 AT1G67030 zinc finger protein 6 zinc finger protein 6 0.7 0.34 -0.31
61 AT3G15357 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: shoot apex,
hypocotyl, root, leaf; Has 6931 Blast hits to 2036 proteins
in 230 species: Archae - 7; Bacteria - 933; Metazoa - 1824;
Fungi - 836; Plants - 482; Viruses - 218; Other Eukaryotes
- 2631 (source: NCBI BLink).		 0.7 0.35 -0.3
62 AT5G46690 beta HLH protein 71 beta HLH protein 71 -0.7 0.31 -0.32
63 AT3G02500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G16030.1); Has 49 Blast hits
to 49 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.32 -0.31
64 AT5G58140 phototropin 2 NON PHOTOTROPIC HYPOCOTYL 1-LIKE,
phototropin 2		 -0.7 0.3 -0.31
65 AT1G19835 Plant protein of unknown function (DUF869) -0.7 0.3 -0.3
66 AT3G50300 HXXXD-type acyl-transferase family protein 0.7 0.32 -0.32
67 AT1G79470 Aldolase-type TIM barrel family protein 0.7 0.31 -0.31
68 AT4G35850 Pentatricopeptide repeat (PPR) superfamily protein 0.7 0.31 -0.31
69 AT3G54770 RNA-binding (RRM/RBD/RNP motifs) family protein 0.69 0.33 -0.32
70 AT2G19990 pathogenesis-related protein-1-like pathogenesis-related
protein-1-like		 0.69 0.33 -0.29
71 AT3G50440 methyl esterase 10 ARABIDOPSIS THALIANA METHYL
ESTERASE 10, methyl esterase 10		 -0.69 0.33 -0.31
72 AT1G11410 S-locus lectin protein kinase family protein -0.69 0.3 -0.3
73 AT5G33280 Voltage-gated chloride channel family protein -0.69 0.3 -0.33
74 AT2G28450 zinc finger (CCCH-type) family protein 0.69 0.31 -0.32
75 AT5G61290 Flavin-binding monooxygenase family protein -0.69 0.33 -0.34
76 AT5G10130 Pollen Ole e 1 allergen and extensin family protein 0.68 0.31 -0.33
77 AT5G63600 flavonol synthase 5 ATFLS5, flavonol synthase 5 0.68 0.3 -0.31
78 AT3G20000 translocase of the outer mitochondrial membrane 40 translocase of the outer
mitochondrial membrane 40		 0.68 0.3 -0.32
79 AT1G09760 U2 small nuclear ribonucleoprotein A U2 small nuclear ribonucleoprotein
A		 0.68 0.31 -0.32
80 AT4G09900 methyl esterase 12 ARABIDOPSIS THALIANA METHYL
ESTERASE 12, methyl esterase 12		 -0.68 0.34 -0.32
81 AT4G36680 Tetratricopeptide repeat (TPR)-like superfamily protein 0.68 0.31 -0.32
82 AT1G73170 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.68 0.3 -0.32
83 AT2G45430 AT-hook motif nuclear-localized protein 22 AT-hook motif nuclear-localized
protein 22		 0.68 0.31 -0.32
84 AT4G21600 endonuclease 5 endonuclease 5 0.68 0.32 -0.34
85 AT3G18200 nodulin MtN21 /EamA-like transporter family protein 0.68 0.32 -0.3
86 AT5G54020 Cysteine/Histidine-rich C1 domain family protein 0.68 0.33 -0.31
87 AT5G66280 GDP-D-mannose 4,6-dehydratase 1 GDP-D-mannose 4,6-dehydratase 1 0.68 0.32 -0.34
88 AT1G17180 glutathione S-transferase TAU 25 glutathione S-transferase TAU 25,
glutathione S-transferase TAU 25		 0.67 0.33 -0.3
89 AT1G32160 Protein of unknown function (DUF760) -0.67 0.34 -0.31
90 AT3G03420 Ku70-binding family protein 0.67 0.3 -0.32
91 AT2G04800 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: hypocotyl, root;
Has 4 Blast hits to 4 proteins in 1 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses -
0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.34 -0.3
92 AT3G28130 nodulin MtN21 /EamA-like transporter family protein -0.67 0.31 -0.3
93 AT5G63530 farnesylated protein 3 ARABIDOPSIS THALIANA FARNESYLATED
PROTEIN 3, farnesylated protein 3		 -0.67 0.31 -0.34
94 AT1G12740 cytochrome P450, family 87, subfamily A, polypeptide 2 cytochrome P450, family 87,
subfamily A, polypeptide 2		 0.67 0.3 -0.3
95 AT4G15560 Deoxyxylulose-5-phosphate synthase AtCLA1, CLA, CLOROPLASTOS
ALTERADOS 1, DEF,
1-DEOXY-D-XYLULOSE 5-PHOSPHATE
SYNTHASE 2, 1-DEOXY-D-XYLULOSE
5-PHOSPHATE SYNTHASE		 -0.67 0.27 -0.32
96 AT4G26950 Protein of unknown function, DUF584 -0.67 0.32 -0.32
97 AT1G72190 D-isomer specific 2-hydroxyacid dehydrogenase family
protein		 -0.67 0.31 -0.31
98 AT2G03530 ureide permease 2 ARABIDOPSIS THALIANA UREIDE
PERMEASE 2, ureide permease 2		 -0.67 0.31 -0.33
99 AT5G51130 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.67 0.32 -0.33
100 AT1G02800 cellulase 2 cellulase 2, CEL2, cellulase 2 -0.66 0.31 -0.34
101 AT2G03550 alpha/beta-Hydrolases superfamily protein -0.66 0.31 -0.32
102 AT5G24000 Protein of unknown function (DUF819) -0.66 0.3 -0.32
103 AT2G23430 Cyclin-dependent kinase inhibitor family protein ICK1, KIP-RELATED PROTEIN 1 -0.66 0.32 -0.3
104 AT1G71050 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 20		 -0.66 0.31 -0.33
105 AT5G49970 pyridoxin (pyrodoxamine) 5'-phosphate oxidase pyridoxin (pyrodoxamine)
5'-phosphate oxidase, HOMOLOG OF
YEAST PYRIDOXINE AUXOTROPHY 3,
pyridoxin (pyrodoxamine)
5'-phosphate oxidase		 -0.66 0.31 -0.32
106 AT5G48850 Tetratricopeptide repeat (TPR)-like superfamily protein SULPHUR DEFICIENCY-INDUCED 1 -0.66 0.32 -0.3
107 AT1G72650 TRF-like 6 TRF-like 6 -0.66 0.31 -0.33
108 AT2G30790 photosystem II subunit P-2 photosystem II subunit P-2 -0.65 0.32 -0.34
109 AT3G01180 starch synthase 2 starch synthase 2, starch synthase
2		 -0.65 0.31 -0.3
110 ATCG00480 ATP synthase subunit beta ATP synthase subunit beta, ATP
synthase subunit beta		 -0.64 0.31 -0.33
111 ATCG00530 CemA-like proton extrusion protein-related YCF10 -0.64 0.3 -0.31
112 AT1G03310 debranching enzyme 1 ARABIDOPSIS THALIANA ISOAMYLASE 2,
BRANCHING ENZYME 2, debranching
enzyme 1, ISA2		 -0.64 0.32 -0.32
113 AT3G08850 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1B, RAPTOR1, RAPTOR1B -0.63 0.31 -0.31
114 AT1G30160 Protein of unknown function (DUF295) -0.63 0.28 -0.32
115 AT3G23590 REF4-related 1 MED33A, REF4-related 1 -0.63 0.33 -0.32
116 AT2G21340 MATE efflux family protein -0.63 0.31 -0.32
117 ATCG00540 photosynthetic electron transfer A photosynthetic electron transfer A -0.63 0.33 -0.32
118 AT1G63710 cytochrome P450, family 86, subfamily A, polypeptide 7 cytochrome P450, family 86,
subfamily A, polypeptide 7		 -0.63 0.33 -0.32
119 AT1G28570 SGNH hydrolase-type esterase superfamily protein -0.62 0.31 -0.32
120 AT3G29320 Glycosyl transferase, family 35 alpha-glucan phosphorylase 1 -0.62 0.34 -0.31
121 AT3G09600 Homeodomain-like superfamily protein LHY-CCA1-LIKE5, REVEILLE 8 -0.62 0.32 -0.34
122 AT3G20930 RNA-binding (RRM/RBD/RNP motifs) family protein -0.62 0.28 -0.3
123 ATCG00570 photosystem II reaction center protein F photosystem II reaction center
protein F		 -0.62 0.3 -0.31
124 AT2G30670 NAD(P)-binding Rossmann-fold superfamily protein -0.62 0.3 -0.32
125 AT1G02020 nitroreductase family protein -0.61 0.32 -0.33
126 AT4G24740 FUS3-complementing gene 2 FUS3-complementing gene 2, AME1,
FUS3-complementing gene 2		 -0.61 0.33 -0.31
127 AT2G30150 UDP-Glycosyltransferase superfamily protein -0.61 0.32 -0.34
128 AT1G05030 Major facilitator superfamily protein -0.61 0.33 -0.32
129 ATCG01050 NADH-Ubiquinone/plastoquinone (complex I) protein NDHD -0.61 0.3 -0.32
130 AT5G07050 nodulin MtN21 /EamA-like transporter family protein -0.61 0.33 -0.32
131 AT1G80800 pseudogene, 40S ribosomal protein S12 (RPS12B), similar to
ribosomal protein S12 GB:AAD39838 GI:5106775 from (Hordeum
vulgare); blastp match of 65% identity and 4.7e-12 P-value
to GP|23617253|dbj|BAC20920.1||AP005764 putative 40S
ribosomal protein S12 {Oryza sativa (japonica
cultivar-group)}		 -0.61 0.33 -0.33
132 AT2G45740 peroxin 11D peroxin 11D -0.61 0.32 -0.34
133 AT1G04140 Transducin family protein / WD-40 repeat family protein -0.61 0.31 -0.3
134 AT3G27925 DegP protease 1 DegP protease 1, DegP protease 1 -0.6 0.33 -0.33
135 AT5G02030 POX (plant homeobox) family protein BEL1-LIKE HOMEODOMAIN 9,
BELLRINGER, HB-6, LARSON,
PENNYWISE, REPLUMLESS, VAAMANA		 -0.6 0.32 -0.29
136 AT3G62380 CONTAINS InterPro DOMAIN/s: F-box associated interaction
domain (InterPro:IPR017451); BEST Arabidopsis thaliana
protein match is: F-box family protein (TAIR:AT1G71320.1);
Has 422 Blast hits to 419 proteins in 26 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 420;
Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).		 -0.6 0.32 -0.29
137 AT3G21210 zinc ion binding -0.6 0.34 -0.32
138 AT4G24540 AGAMOUS-like 24 AGAMOUS-like 24 -0.6 0.31 -0.29
139 AT1G33070 MADS-box family protein -0.6 0.33 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
140 C0133 Kaempferol-3,7-O-α-dirhamnopyranoside Kaempferol-3,7-O-α-L-dirhamnopyranoside Kaempferol-3-rhamnoside-7-rhamnoside kaempferol glucoside biosynthesis (Arabidopsis) -0.86 0.47 -0.49 C0133