AT5G12350 : -
Query Information
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AGICode AT5G12350
Description Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G12350 Regulator of chromosome condensation (RCC1) family with
FYVE zinc finger domain		 1 0.32 -0.31
2 AT3G10760 Homeodomain-like superfamily protein 0.74 0.32 -0.32
3 AT3G51250 Senescence/dehydration-associated protein-related 0.71 0.31 -0.33
4 AT1G17440 Transcription initiation factor TFIID subunit A CYTOKININ-HYPERSENSITIVE 1,
ENHANCED ETHYLENE RESPONSE 4,
TBP-ASSOCIATED FACTOR 12B		 0.69 0.32 -0.34
5 AT5G13640 phospholipid:diacylglycerol acyltransferase ARABIDOPSIS THALIANA
PHOSPHOLIPID:DIACYLGLYCEROL
ACYLTRANSFERASE,
phospholipid:diacylglycerol
acyltransferase,
PHOSPHOLIPID:DIACYLGLYCEROL
ACYLTRANSFERASE 1		 0.69 0.31 -0.31
6 AT2G39480 P-glycoprotein 6 ATP-binding cassette B6,
P-glycoprotein 6		 0.69 0.33 -0.3
7 AT1G72710 casein kinase 1-like protein 2 casein kinase 1-like protein 2 0.68 0.28 -0.33
8 AT2G27170 Structural maintenance of chromosomes (SMC) family protein STRUCTURAL MAINTENANCE OF
CHROMOSOMES 3, TITAN7		 0.66 0.31 -0.33
9 AT5G66810 CONTAINS InterPro DOMAIN/s: CTLH, C-terminal LisH motif
(InterPro:IPR006595); BEST Arabidopsis thaliana protein
match is: LisH and RanBPM domains containing protein
(TAIR:AT1G61150.1); Has 333 Blast hits to 242 proteins in
88 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi
- 47; Plants - 152; Viruses - 0; Other Eukaryotes - 30
(source: NCBI BLink).		 0.66 0.3 -0.33
10 AT3G01310 Phosphoglycerate mutase-like family protein 0.66 0.32 -0.31
11 AT3G12680 floral homeotic protein (HUA1) ENHANCER OF AG-4 1 0.65 0.32 -0.33
12 AT1G43850 SEUSS transcriptional co-regulator seuss 0.65 0.31 -0.31
13 AT1G55680 Transducin/WD40 repeat-like superfamily protein 0.64 0.32 -0.32
14 AT4G02480 AAA-type ATPase family protein 0.63 0.29 -0.29
15 AT4G34100 RING/U-box superfamily protein 0.63 0.31 -0.3
16 AT5G64170 dentin sialophosphoprotein-related 0.63 0.32 -0.34
17 AT1G31870 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cytosol, nucleus; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2050,
pre-mRNA-splicing factor (InterPro:IPR018609); Has 13303
Blast hits to 9618 proteins in 489 species: Archae - 8;
Bacteria - 444; Metazoa - 7153; Fungi - 2294; Plants - 942;
Viruses - 128; Other Eukaryotes - 2334 (source: NCBI
BLink).		 0.63 0.3 -0.34
18 AT4G35800 RNA polymerase II large subunit RNA polymerase II large subunit,
RNA POLYMERASE II LARGE SUBUNIT,
RNA_POL_II_LSRNA_POL_II_LS, RNA
POLYMERASE II LARGE SUBUNIT		 0.63 0.31 -0.32
19 AT4G00450 RNA polymerase II transcription mediators CENTER CITY, CRYPTIC PRECOCIOUS 0.63 0.32 -0.31
20 AT2G39750 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.63 0.31 -0.34
21 AT3G43700 BTB-POZ and MATH domain 6 BTB-POZ AND MATH DOMAIN 6, BTB-POZ
and MATH domain 6		 -0.63 0.32 -0.32
22 AT5G19400 Telomerase activating protein Est1 SMG7 0.62 0.31 -0.31
23 AT4G12640 RNA recognition motif (RRM)-containing protein 0.62 0.3 -0.33
24 AT5G40460 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits
to 87 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.3 -0.31
25 AT2G39260 binding;RNA binding 0.62 0.34 -0.31
26 AT4G19420 Pectinacetylesterase family protein -0.62 0.3 -0.31
27 AT5G63320 nuclear protein X1 nuclear protein X1 0.62 0.32 -0.31
28 AT2G01330 nucleotide binding 0.61 0.32 -0.31
29 AT3G63070 Tudor/PWWP/MBT domain-containing protein 0.61 0.32 -0.34
30 AT5G45880 Pollen Ole e 1 allergen and extensin family protein -0.61 0.32 -0.33
31 AT1G73650 Protein of unknown function (DUF1295) 0.6 0.31 -0.33
32 AT4G03390 STRUBBELIG-receptor family 3 STRUBBELIG-receptor family 3 0.6 0.32 -0.32
33 AT5G64270 splicing factor, putative 0.6 0.31 -0.32
34 AT4G38380 MATE efflux family protein 0.6 0.3 -0.32
35 AT2G47980 sister-chromatid cohesion protein 3 SISTER-CHROMATID COHESION PROTEIN
3, sister-chromatid cohesion
protein 3		 0.6 0.3 -0.3
36 AT5G04240 Zinc finger (C2H2 type) family protein / transcription
factor jumonji (jmj) family protein		 EARLY FLOWERING 6 0.6 0.31 -0.32
37 AT4G33180 alpha/beta-Hydrolases superfamily protein 0.6 0.32 -0.31
38 AT5G55780 Cysteine/Histidine-rich C1 domain family protein -0.59 0.34 -0.31
39 AT2G27950 Ring/U-Box superfamily protein 0.59 0.31 -0.29
40 AT3G01780 ARM repeat superfamily protein TPLATE 0.59 0.32 -0.29
41 AT2G40840 disproportionating enzyme 2 disproportionating enzyme 2 0.59 0.32 -0.33
42 AT3G17750 Protein kinase superfamily protein 0.59 0.3 -0.3
43 AT3G06010 Homeotic gene regulator ATCHR12 0.57 0.32 -0.32
44 AT5G01400 HEAT repeat-containing protein ENHANCED SILENCING PHENOTYPE 4 0.57 0.34 -0.31
45 AT4G18860 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.57 0.32 -0.3
46 AT4G09580 SNARE associated Golgi protein family 0.57 0.3 -0.31
47 AT1G28420 homeobox-1 homeobox-1 0.56 0.31 -0.32
48 AT2G46340 SPA (suppressor of phyA-105) protein family SUPPRESSOR OF PHYA-105 1 0.56 0.31 -0.32
49 AT3G08510 phospholipase C 2 phospholipase C 2, phospholipase C
2		 0.56 0.32 -0.31
50 AT1G05960 ARM repeat superfamily protein 0.56 0.31 -0.33
51 AT3G02680 nijmegen breakage syndrome 1 ATNBS1, nijmegen breakage syndrome
1		 -0.55 0.33 -0.29
52 AT1G18950 DDT domain superfamily 0.55 0.3 -0.31
53 AT1G76950 Regulator of chromosome condensation (RCC1) family with
FYVE zinc finger domain		 PRAF1 0.55 0.31 -0.32
54 AT2G28390 SAND family protein 0.55 0.31 -0.32
55 AT3G44820 Phototropic-responsive NPH3 family protein 0.55 0.33 -0.33
56 AT3G20110 cytochrome P450, family 705, subfamily A, polypeptide 20 cytochrome P450, family 705,
subfamily A, polypeptide 20		 -0.55 0.32 -0.31
57 AT2G01690 ARM repeat superfamily protein 0.55 0.3 -0.34
58 AT3G50060 myb domain protein 77 myb domain protein 77 -0.54 0.3 -0.32
59 AT1G72950 Disease resistance protein (TIR-NBS class) -0.53 0.3 -0.29
60 AT3G49790 Carbohydrate-binding protein -0.52 0.3 -0.3
61 AT4G12330 cytochrome P450, family 706, subfamily A, polypeptide 7 cytochrome P450, family 706,
subfamily A, polypeptide 7		 -0.52 0.31 -0.3
62 AT5G54620 Ankyrin repeat family protein -0.51 0.32 -0.32
63 AT1G19380 Protein of unknown function (DUF1195) -0.51 0.31 -0.3
64 AT4G24210 F-box family protein SLEEPY1 -0.49 0.32 -0.32
65 AT1G65340 cytochrome P450, family 96, subfamily A, polypeptide 3 cytochrome P450, family 96,
subfamily A, polypeptide 3		 -0.48 0.32 -0.29
66 AT5G38790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G30580.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.48 0.29 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
67 C0233 Sinapinic acid - cis-Sinapinate; Sinapate ferulate and sinapate biosynthesis,
sinapate ester biosynthesis,
free phenylpropanoid acid biosynthesis 		0.7 0.43 -0.42 C0233
68 C0144 Maltose D-Maltose α-Maltose starch degradation II 0.68 0.46 -0.47 C0144
69 C0089 Fortunellin - - - 0.67 0.43 -0.43
70 C0221 Quercetin-3-(2''-O-α-rhamnosyl)-O-β-glucosyl-7-O-α-rhamnoside Quercetin-3-(2''-O-α-L-rhamnosyl)-O-β-D-glucosyl-7-O-α-L-rhamnoside - quercetin glucoside biosynthesis (Arabidopsis) -0.62 0.46 -0.45
71 C0212 PR_MST_2336.8 - - - 0.6 0.43 -0.44
72 C0024 2-(Anilinomethyl)pyrrolidine (S)-(+)-2-(anilinomethyl)pyrrolidine - - 0.56 0.45 -0.42
73 C0179 MST_2494.8 - - - -0.48 0.29 -0.3