AGICode | AT1G44575 |
Description | Chlorophyll A-B binding family protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G44575 | Chlorophyll A-B binding family protein | CP22, NONPHOTOCHEMICAL QUENCHING 4, PHOTOSYSTEM II SUBUNIT S |
1 | 0.31 | -0.32 | ||
2 | AT1G67740 | photosystem II BY | photosystem II BY, YCF32 | 0.93 | 0.31 | -0.32 | ||
3 | AT4G01050 | thylakoid rhodanese-like | thylakoid rhodanese-like | 0.92 | 0.34 | -0.3 | ||
4 | AT3G25920 | ribosomal protein L15 | ribosomal protein L15 | 0.92 | 0.31 | -0.31 | ||
5 | AT1G64510 | Translation elongation factor EF1B/ribosomal protein S6 family protein |
0.92 | 0.3 | -0.32 | |||
6 | AT3G15190 | chloroplast 30S ribosomal protein S20, putative | 0.9 | 0.31 | -0.29 | |||
7 | AT1G78630 | Ribosomal protein L13 family protein | embryo defective 1473 | 0.9 | 0.3 | -0.33 | ||
8 | AT5G65220 | Ribosomal L29 family protein | 0.9 | 0.32 | -0.29 | |||
9 | AT1G48350 | Ribosomal L18p/L5e family protein | EMBRYO DEFECTIVE 3105 | 0.9 | 0.29 | -0.3 | ||
10 | AT5G14320 | Ribosomal protein S13/S18 family | EMBRYO DEFECTIVE 3137 | 0.9 | 0.29 | -0.31 | ||
11 | AT5G47190 | Ribosomal protein L19 family protein | 0.9 | 0.33 | -0.34 | |||
12 | AT1G14270 | CAAX amino terminal protease family protein | 0.9 | 0.31 | -0.29 | |||
13 | AT2G20890 | photosystem II reaction center PSB29 protein | photosystem II reaction center PSB29 protein, THYLAKOID FORMATION1 |
0.9 | 0.32 | -0.33 | ||
14 | AT5G35630 | glutamine synthetase 2 | GLUTAMINE SYNTHETASE LIKE 1, GLUTAMINE SYNTHETASE 2, glutamine synthetase 2 |
0.89 | 0.31 | -0.3 | ||
15 | AT2G48070 | resistance to phytophthora 1 | RESISTANCE TO PHYTOPHTHORA 1 | 0.89 | 0.31 | -0.3 | ||
16 | AT4G34620 | small subunit ribosomal protein 16 | small subunit ribosomal protein 16 | 0.89 | 0.31 | -0.3 | ||
17 | AT2G43030 | Ribosomal protein L3 family protein | 0.89 | 0.33 | -0.32 | |||
18 | AT1G76450 | Photosystem II reaction center PsbP family protein | 0.88 | 0.33 | -0.31 | |||
19 | AT4G20360 | RAB GTPase homolog E1B | ATRAB8D, RAB GTPase homolog E1B, RAB GTPase homolog E1B |
0.88 | 0.32 | -0.32 | ||
20 | AT3G12780 | phosphoglycerate kinase 1 | phosphoglycerate kinase 1 | 0.88 | 0.31 | -0.32 | ||
21 | AT5G13510 | Ribosomal protein L10 family protein | EMBRYO DEFECTIVE 3136 | 0.88 | 0.32 | -0.35 | ||
22 | AT3G24430 | ATP binding | HIGH-CHLOROPHYLL-FLUORESCENCE 101 | 0.88 | 0.31 | -0.32 | ||
23 | AT1G79850 | ribosomal protein S17 | CS17, PIGMENT DEFECTIVE 347, PLASTID RIBOSOMAL SMALL SUBUNIT PROTEIN 17, ribosomal protein S17 |
0.88 | 0.3 | -0.3 | ||
24 | AT1G59840 | cofactor assembly of complex C | cofactor assembly of complex C | 0.88 | 0.33 | -0.3 | ||
25 | AT1G64680 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits to 146 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). |
0.87 | 0.31 | -0.3 | |||
26 | AT2G01590 | chlororespiratory reduction 3 | CHLORORESPIRATORY REDUCTION 3 | 0.87 | 0.32 | -0.32 | ||
27 | AT1G16080 | unknown protein; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 81 Blast hits to 81 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). |
0.87 | 0.32 | -0.32 | |||
28 | AT5G55220 | trigger factor type chaperone family protein | 0.87 | 0.31 | -0.3 | |||
29 | AT1G55480 | protein containing PDZ domain, a K-box domain, and a TPR region |
protein containing PDZ domain, a K-box domain, and a TPR region |
0.87 | 0.33 | -0.34 | ||
30 | AT4G38970 | fructose-bisphosphate aldolase 2 | fructose-bisphosphate aldolase 2 | 0.87 | 0.33 | -0.29 | ||
31 | AT4G10300 | RmlC-like cupins superfamily protein | 0.87 | 0.33 | -0.32 | |||
32 | AT3G63410 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
ALBINO OR PALE GREEN MUTANT 1, E37, INNER ENVELOPE PROTEIN 37, VITAMIN E DEFECTIVE 3 |
0.87 | 0.31 | -0.32 | ||
33 | AT5G46420 | 16S rRNA processing protein RimM family | 0.87 | 0.31 | -0.29 | |||
34 | AT4G35250 | NAD(P)-binding Rossmann-fold superfamily protein | 0.86 | 0.32 | -0.34 | |||
35 | AT4G01150 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). |
0.86 | 0.32 | -0.34 | |||
36 | AT4G17560 | Ribosomal protein L19 family protein | 0.86 | 0.3 | -0.3 | |||
37 | AT1G10960 | ferredoxin 1 | ferredoxin 1, ferredoxin 1 | 0.86 | 0.32 | -0.32 | ||
38 | AT3G63140 | chloroplast stem-loop binding protein of 41 kDa | chloroplast stem-loop binding protein of 41 kDa |
0.86 | 0.32 | -0.32 | ||
39 | AT5G16140 | Peptidyl-tRNA hydrolase family protein | 0.86 | 0.32 | -0.33 | |||
40 | AT5G11270 | overexpressor of cationic peroxidase 3 | overexpressor of cationic peroxidase 3 |
0.86 | 0.32 | -0.32 | ||
41 | AT1G12800 | Nucleic acid-binding, OB-fold-like protein | 0.86 | 0.33 | -0.3 | |||
42 | AT2G37220 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.86 | 0.32 | -0.29 | |||
43 | AT3G55250 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 46 Blast hits to 46 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
PIGMENT DEFECTIVE 329 | 0.86 | 0.31 | -0.3 | ||
44 | AT5G43750 | NAD(P)H dehydrogenase 18 | NAD(P)H dehydrogenase 18, Photosynthetic NDH subcomplex B 5 |
0.85 | 0.31 | -0.29 | ||
45 | AT4G01310 | Ribosomal L5P family protein | 0.85 | 0.31 | -0.29 | |||
46 | AT2G43560 | FKBP-like peptidyl-prolyl cis-trans isomerase family protein |
0.85 | 0.32 | -0.3 | |||
47 | AT2G27680 | NAD(P)-linked oxidoreductase superfamily protein | 0.85 | 0.32 | -0.32 | |||
48 | AT1G64150 | Uncharacterized protein family (UPF0016) | 0.85 | 0.32 | -0.32 | |||
49 | AT2G35370 | glycine decarboxylase complex H | glycine decarboxylase complex H | 0.85 | 0.31 | -0.29 | ||
50 | AT2G24090 | Ribosomal protein L35 | 0.85 | 0.3 | -0.31 | |||
51 | AT2G47590 | photolyase/blue-light receptor 2 | photolyase/blue-light receptor 2 | 0.85 | 0.31 | -0.31 | ||
52 | AT4G12800 | photosystem I subunit l | photosystem I subunit l | 0.85 | 0.31 | -0.32 | ||
53 | AT3G60750 | Transketolase | 0.84 | 0.31 | -0.32 | |||
54 | AT3G62030 | rotamase CYP 4 | cyclophilin 20-3, rotamase CYP 4 | 0.84 | 0.34 | -0.3 | ||
55 | AT4G21750 | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein |
MERISTEM LAYER 1 | 0.84 | 0.31 | -0.34 | ||
56 | AT2G29360 | NAD(P)-binding Rossmann-fold superfamily protein | 0.84 | 0.32 | -0.32 | |||
57 | AT2G28110 | Exostosin family protein | FRAGILE FIBER 8, IRREGULAR XYLEM 7 | -0.8 | 0.31 | -0.32 | ||
58 | AT1G76790 | O-methyltransferase family protein | indole glucosinolate O-methyltransferase 5 |
-0.79 | 0.31 | -0.31 | ||
59 | AT5G10820 | Major facilitator superfamily protein | -0.79 | 0.32 | -0.32 | |||
60 | AT1G14240 | GDA1/CD39 nucleoside phosphatase family protein | -0.78 | 0.31 | -0.31 | |||
61 | AT1G35260 | MLP-like protein 165 | MLP-like protein 165 | -0.78 | 0.3 | -0.3 | ||
62 | AT5G65660 | hydroxyproline-rich glycoprotein family protein | -0.76 | 0.32 | -0.32 | |||
63 | AT4G29690 | Alkaline-phosphatase-like family protein | -0.75 | 0.31 | -0.29 | |||
64 | AT3G12760 | CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation protein (InterPro:IPR014764), Protein of unknown function DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast hits to 855 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). |
-0.74 | 0.32 | -0.32 | |||
65 | AT3G16460 | Mannose-binding lectin superfamily protein | jacalin-related lectin 34 | -0.73 | 0.3 | -0.34 | ||
66 | AT3G16450 | Mannose-binding lectin superfamily protein | Jacalin-related lectin 33 | -0.72 | 0.33 | -0.32 | ||
67 | AT1G77000 | RNI-like superfamily protein | ARABIDOPSIS HOMOLOG OF HOMOLOG OF HUMAN SKP2 2, SKP2B |
-0.72 | 0.34 | -0.31 | ||
68 | AT5G38030 | MATE efflux family protein | -0.71 | 0.32 | -0.31 | |||
69 | AT4G37410 | cytochrome P450, family 81, subfamily F, polypeptide 4 | cytochrome P450, family 81, subfamily F, polypeptide 4 |
-0.71 | 0.31 | -0.32 | ||
70 | AT5G48010 | thalianol synthase 1 | Arabidopsis thaliana thalianol synthase 1, THALIANOL SYNTHASE, thalianol synthase 1 |
-0.71 | 0.29 | -0.3 | ||
71 | AT5G03240 | polyubiquitin 3 | polyubiquitin 3 | -0.7 | 0.32 | -0.33 | ||
72 | AT5G51500 | Plant invertase/pectin methylesterase inhibitor superfamily | -0.7 | 0.3 | -0.31 | |||
73 | AT3G54950 | patatin-like protein 6 | patatin-like protein 6, PATATIN-LIKE PROTEIN 7, patatin-related phospholipase IIIbeta |
-0.69 | 0.32 | -0.33 | ||
74 | AT5G23830 | MD-2-related lipid recognition domain-containing protein | -0.68 | 0.29 | -0.32 | |||
75 | AT5G47990 | cytochrome P450, family 705, subfamily A, polypeptide 5 | cytochrome P450, family 705, subfamily A, polypeptide 5, THALIAN-DIOL DESATURASE, THALIAN-DIOL DESATURASE |
-0.68 | 0.32 | -0.33 | ||
76 | AT5G35940 | Mannose-binding lectin superfamily protein | -0.67 | 0.33 | -0.32 | |||
77 | AT3G03520 | non-specific phospholipase C3 | non-specific phospholipase C3 | -0.65 | 0.32 | -0.36 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
78 | C0051 | Aconitic acid | cis-Aconitic acid | cis-Aconitate | glutamine biosynthesis III, TCA cycle variation V (plant), glyoxylate cycle, TCA cycle variation III (eukaryotic) |
-0.78 | 0.43 | -0.45 |