AGICode | AT1G44510 |
Description | transposable element gene |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G44510 | transposable element gene | 1 | 0.31 | -0.32 | |||
2 | AT5G37090 | transposable element gene | -0.65 | 0.31 | -0.32 | |||
3 | AT2G29220 | Concanavalin A-like lectin protein kinase family protein | -0.64 | 0.32 | -0.31 | |||
4 | AT2G20160 | E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein |
ARABIDOPSIS SKP1-LIKE 17, MEIDOS | -0.63 | 0.31 | -0.32 | ||
5 | AT3G62170 | VANGUARD 1 homolog 2 | VANGUARD 1 homolog 2 | -0.62 | 0.31 | -0.34 | ||
6 | AT1G27160 | valyl-tRNA synthetase / valine--tRNA ligase-related | 0.61 | 0.31 | -0.31 | |||
7 | AT3G06630 | protein kinase family protein | -0.6 | 0.33 | -0.33 | |||
8 | AT3G23960 | F-box and associated interaction domains-containing protein | 0.6 | 0.32 | -0.29 | |||
9 | AT3G31940 | transposable element gene | -0.59 | 0.31 | -0.32 | |||
10 | AT5G11940 | Subtilase family protein | 0.58 | 0.33 | -0.31 | |||
11 | AT1G01200 | RAB GTPase homolog A3 | ARABIDOPSIS RAB GTPASE HOMOLOG A3, RAB GTPase homolog A3, RAB GTPase homolog A3 |
-0.58 | 0.33 | -0.3 | ||
12 | AT3G44760 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF626) (TAIR:AT3G44770.1); Has 9 Blast hits to 9 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.58 | 0.34 | -0.3 | |||
13 | AT2G26850 | F-box family protein | 0.57 | 0.32 | -0.32 | |||
14 | AT1G68230 | Reticulon family protein | 0.57 | 0.32 | -0.3 | |||
15 | AT5G22410 | root hair specific 18 | root hair specific 18 | -0.56 | 0.31 | -0.31 | ||
16 | AT5G45060 | Disease resistance protein (TIR-NBS-LRR class) family | 0.56 | 0.3 | -0.33 | |||
17 | AT3G19740 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.55 | 0.3 | -0.31 | |||
18 | AT1G27790 | transposable element gene | -0.55 | 0.3 | -0.32 | |||
19 | AT3G03880 | Protein of unknown function (DUF1639) | 0.55 | 0.34 | -0.34 | |||
20 | AT3G42350 | transposable element gene | -0.54 | 0.31 | -0.29 | |||
21 | AT1G08710 | F-box family protein | 0.54 | 0.31 | -0.33 | |||
22 | AT1G36020 | BEST Arabidopsis thaliana protein match is: DEAD/DEAH box RNA helicase family protein (TAIR:AT1G35530.1); Has 18 Blast hits to 18 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.54 | 0.31 | -0.31 | |||
23 | AT5G40990 | GDSL lipase 1 | GDSL lipase 1 | 0.54 | 0.32 | -0.32 | ||
24 | AT1G34510 | Peroxidase superfamily protein | -0.54 | 0.28 | -0.31 | |||
25 | AT2G07728 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.54 | 0.3 | -0.31 | |||
26 | AT4G27290 | S-locus lectin protein kinase family protein | -0.54 | 0.33 | -0.31 | |||
27 | AT5G07510 | glycine-rich protein 14 | ARABIDOPSIS THALIANA GLYCINE-RICH PROTEIN 4, ARABIDOPSIS THALIANA GLYCINE-RICH PROTEIN 14, GLYCINE-RICH PROTEIN 4, glycine-rich protein 14 |
-0.53 | 0.3 | -0.32 | ||
28 | AT3G62510 | protein disulfide isomerase-related | 0.53 | 0.34 | -0.32 | |||
29 | AT3G50160 | Plant protein of unknown function (DUF247) | -0.53 | 0.31 | -0.32 | |||
30 | AT4G03330 | syntaxin of plants 123 | ATSYP123, syntaxin of plants 123 | -0.53 | 0.32 | -0.33 | ||
31 | AT4G33290 | F-box and associated interaction domains-containing protein | -0.53 | 0.32 | -0.32 | |||
32 | AT5G08130 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
BIM1 | -0.52 | 0.31 | -0.33 | ||
33 | AT5G35760 | Beta-galactosidase related protein | 0.52 | 0.32 | -0.3 | |||
34 | AT5G65160 | tetratricopeptide repeat (TPR)-containing protein | tetratricopeptide repeat 14 | -0.52 | 0.31 | -0.33 | ||
35 | AT2G04600 | transposable element gene | -0.52 | 0.32 | -0.33 | |||
36 | AT3G04150 | RmlC-like cupins superfamily protein | -0.52 | 0.31 | -0.32 | |||
37 | AT5G37490 | ARM repeat superfamily protein | 0.52 | 0.33 | -0.32 | |||
38 | AT5G09360 | laccase 14 | laccase 14 | -0.51 | 0.33 | -0.3 | ||
39 | AT3G60330 | H(+)-ATPase 7 | H(+)-ATPase 7, H(+)-ATPase 7 | -0.51 | 0.32 | -0.31 | ||
40 | AT5G17970 | Disease resistance protein (TIR-NBS-LRR class) family | 0.51 | 0.31 | -0.32 | |||
41 | AT1G30110 | nudix hydrolase homolog 25 | nudix hydrolase homolog 25, nudix hydrolase homolog 25 |
0.51 | 0.32 | -0.31 | ||
42 | AT3G24260 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Histone deacetylase interacting (InterPro:IPR013194); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28870.1); Has 220 Blast hits to 218 proteins in 65 species: Archae - 7; Bacteria - 6; Metazoa - 43; Fungi - 2; Plants - 115; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink). |
0.51 | 0.32 | -0.32 | |||
43 | AT4G18870 | E2F/DP family winged-helix DNA-binding domain | -0.51 | 0.33 | -0.32 | |||
44 | AT1G65340 | cytochrome P450, family 96, subfamily A, polypeptide 3 | cytochrome P450, family 96, subfamily A, polypeptide 3 |
-0.51 | 0.3 | -0.32 | ||
45 | AT2G33760 | Pentatricopeptide repeat (PPR) superfamily protein | 0.51 | 0.33 | -0.31 | |||
46 | AT1G14760 | KNOX Arabidopsis thaliana meinox | KNOX Arabidopsis thaliana meinox | 0.51 | 0.32 | -0.31 | ||
47 | ATMG00680 | hypothetical protein | ORF122C | 0.51 | 0.31 | -0.3 | ||
48 | AT3G07530 | CONTAINS InterPro DOMAIN/s: Beta-Casp domain (InterPro:IPR022712); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73 kDa subunit-II (TAIR:AT2G01730.1); Has 624 Blast hits to 615 proteins in 160 species: Archae - 54; Bacteria - 6; Metazoa - 333; Fungi - 44; Plants - 93; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). |
0.5 | 0.31 | -0.32 | |||
49 | AT4G01840 | Ca2+ activated outward rectifying K+ channel 5 | ATKCO5, ATTPK5, Ca2+ activated outward rectifying K+ channel 5, TPK5 |
-0.5 | 0.31 | -0.33 | ||
50 | AT1G60985 | SCR-like 6 | SCR-like 6 | 0.49 | 0.34 | -0.32 | ||
51 | AT5G45980 | WUSCHEL related homeobox 8 | STIMPY-LIKE, WUSCHEL related homeobox 8, WUSCHEL related homeobox 9B |
-0.49 | 0.31 | -0.31 | ||
52 | AT3G30220 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43150.1); Has 30 Blast hits to 30 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.49 | 0.32 | -0.31 | |||
53 | AT3G05930 | germin-like protein 8 | germin-like protein 8 | -0.49 | 0.31 | -0.3 | ||
54 | AT3G60940 | Putative endonuclease or glycosyl hydrolase | -0.49 | 0.31 | -0.32 | |||
55 | AT5G36960 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.48 | 0.32 | -0.3 | |||
56 | AT4G03880 | transposable element gene | -0.48 | 0.31 | -0.31 | |||
57 | AT3G28600 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.48 | 0.31 | -0.31 | |||
58 | AT1G43980 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.48 | 0.32 | -0.32 | |||
59 | AT4G02250 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
0.48 | 0.29 | -0.29 | |||
60 | AT3G43060 | transposable element gene | 0.48 | 0.31 | -0.32 | |||
61 | AT2G37010 | non-intrinsic ABC protein 12 | non-intrinsic ABC protein 12, non-intrinsic ABC protein 12 |
0.47 | 0.33 | -0.31 | ||
62 | AT3G17060 | Pectin lyase-like superfamily protein | 0.47 | 0.33 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
63 | C0088 | FAD | - | FAD | cytokinins degradation, lysine degradation II, valine degradation I, isoleucine degradation I, flavin biosynthesis I (bacteria and plants) |
-0.7 | 0.44 | -0.44 | ||
64 | C0006 | β-Homothreonine | L-β-Homothreonine | - | - | -0.66 | 0.44 | -0.42 | ||
65 | C0261 | UDP-glucose | - | UDP-D-glucose | quercetin glucoside biosynthesis (Arabidopsis), abscisic acid glucose ester biosynthesis, anthocyanin biosynthesis (delphinidin 3-O-glucoside), UDP-glucose biosynthesis (from sucrose), 2,4,6-trinitrotoluene degradation, galactose degradation I (Leloir pathway), cytokinins-O-glucoside biosynthesis, trehalose biosynthesis I, dolichyl-diphosphooligosaccharide biosynthesis, phenolic malonylglucosides biosynthesis, callose biosynthesis, superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside), glucosinolate biosynthesis from hexahomomethionine, coniferin metabolism, glucosinolate biosynthesis from phenylalanine, xyloglucan biosynthesis, glucosinolate biosynthesis from pentahomomethionine, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), glucosinolate biosynthesis from dihomomethionine, cellulose biosynthesis, sinapate ester biosynthesis, superpathway of IAA conjugate biosynthesis, salicylate glucosides biosynthesis IV, sucrose biosynthesis I, glucosinolate biosynthesis from trihomomethionine, tetrahydrofolate biosynthesis II, sucrose degradation III, UDP-D-xylose and UDP-D-glucuronate biosynthesis, coumarin biosynthesis (via 2-coumarate), superpathway of sucrose and starch metabolism I (non-photosynthetic tissue), monolignol glucosides biosynthesis, glucosinolate biosynthesis from homomethionine, kaempferol glucoside biosynthesis (Arabidopsis), salicylate glucosides biosynthesis III, cytokinins 7-N-glucoside biosynthesis, galactose degradation III, cytokinins 9-N-glucoside biosynthesis, glucosinolate biosynthesis from tryptophan, UDP-galactose biosynthesis, salicylate glucosides biosynthesis II, stachyose degradation, superpathway of sucrose and starch metabolism II (photosynthetic tissue), UDP-glucose biosynthesis (from glucose 6-phosphate), sphingolipid biosynthesis (plants), glucosinolate biosynthesis from tetrahomomethionine, galactose degradation II, UDP-L-rhamnose biosynthesis |
-0.65 | 0.46 | -0.45 | ||
66 | C0262 | UDP-glucuronic acid | - | UDP-D-glucuronate | xylan biosynthesis, UDP-D-glucuronate biosynthesis (from myo-inositol), UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate), UDP-D-apiose biosynthesis (from UDP-D-glucuronate), galactose degradation III, UDP-D-xylose and UDP-D-glucuronate biosynthesis |
-0.61 | 0.44 | -0.45 | ||
67 | C0061 | Aspartic acid | L-Aspartic acid | L-Aspartate | purine nucleotide metabolism (phosphotransfer and nucleotide modification), tRNA charging, indole-3-acetyl-amino acid biosynthesis, citrulline-nitric oxide cycle, asparagine degradation I, cyanide detoxification II, asparagine biosynthesis I, asparagine biosynthesis III (tRNA-dependent), arginine biosynthesis I, inosine-5'-phosphate biosynthesis II, uridine-5'-phosphate biosynthesis, aspartate biosynthesis, homoserine biosynthesis, lysine biosynthesis VI, aspartate degradation II, urea cycle, purine nucleotides de novo biosynthesis II, NAD biosynthesis I (from aspartate), IAA degradation IV, arginine biosynthesis II (acetyl cycle) |
-0.53 | 0.33 | -0.31 | ||
68 | C0066 | Choline | - | Choline | choline biosynthesis III, phosphatidylcholine biosynthesis I, choline biosynthesis I, glycine betaine biosynthesis III (plants), choline biosynthesis II, sinapate ester biosynthesis, phospholipases |
-0.49 | 0.33 | -0.31 |