AT4G14680 : APS3
Query Information
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AGICode AT4G14680
Description Pseudouridine synthase/archaeosine transglycosylase-like family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G14680 Pseudouridine synthase/archaeosine transglycosylase-like
family protein		 APS3 1 0.31 -0.33
2 AT4G30530 Class I glutamine amidotransferase-like superfamily protein gamma-glutamyl peptidase 1 0.88 0.34 -0.33
3 AT5G07460 peptidemethionine sulfoxide reductase 2 ARABIDOPSIS THALIANA METHIONINE
SULFOXIDE REDUCTASE 2,
peptidemethionine sulfoxide
reductase 2		 0.87 0.32 -0.32
4 AT3G22890 ATP sulfurylase 1 ATP sulfurylase 1 0.87 0.32 -0.31
5 AT4G15920 Nodulin MtN3 family protein AtSWEET17, SWEET17 0.85 0.33 -0.32
6 AT4G13410 Nucleotide-diphospho-sugar transferases superfamily protein ATCSLA15, CELLULOSE SYNTHASE LIKE
A15		 0.84 0.32 -0.31
7 AT1G62200 Major facilitator superfamily protein AtPTR6, peptide transporter 6 0.84 0.31 -0.3
8 AT1G19670 chlorophyllase 1 chlorophyllase 1,
CORONATINE-INDUCED PROTEIN 1,
chlorophyllase 1,
CORONATINE-INDUCED PROTEIN 1		 0.83 0.31 -0.32
9 AT4G24350 Phosphorylase superfamily protein 0.82 0.33 -0.3
10 AT3G04210 Disease resistance protein (TIR-NBS class) 0.81 0.3 -0.32
11 AT1G12240 Glycosyl hydrolases family 32 protein ATBETAFRUCT4, VACUOLAR INVERTASE 0.81 0.31 -0.29
12 AT2G14750 APS kinase APS KINASE 1, APS kinase,
ADENOSINE-5'-PHOSPHOSULFATE (APS)
KINASE 1, ATAKN1		 0.8 0.32 -0.31
13 AT4G04610 APS reductase 1 APR, APS reductase 1, ATAPR1, PAPS
REDUCTASE HOMOLOG 19		 0.79 0.31 -0.33
14 AT5G16190 cellulose synthase like A11 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE LIKE A11, cellulose
synthase like A11		 0.78 0.31 -0.3
15 AT2G29090 cytochrome P450, family 707, subfamily A, polypeptide 2 cytochrome P450, family 707,
subfamily A, polypeptide 2		 -0.77 0.32 -0.33
16 AT1G64200 vacuolar H+-ATPase subunit E isoform 3 vacuolar H+-ATPase subunit E
isoform 3		 0.77 0.3 -0.3
17 AT5G11950 Putative lysine decarboxylase family protein LONELY GUY 8 0.77 0.33 -0.32
18 AT4G01897 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF952 (InterPro:IPR009297); Has 763 Blast
hits to 763 proteins in 180 species: Archae - 0; Bacteria -
351; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0;
Other Eukaryotes - 383 (source: NCBI BLink).		 0.76 0.3 -0.33
19 AT1G72450 jasmonate-zim-domain protein 6 jasmonate-zim-domain protein 6,
TIFY DOMAIN PROTEIN 11B		 0.76 0.31 -0.32
20 AT5G55930 oligopeptide transporter 1 ARABIDOPSIS THALIANA OLIGOPEPTIDE
TRANSPORTER 1, oligopeptide
transporter 1		 0.75 0.33 -0.31
21 AT3G10260 Reticulon family protein 0.75 0.31 -0.3
22 AT1G11950 Transcription factor jumonji (jmjC) domain-containing
protein		 -0.75 0.33 -0.31
23 AT1G12140 flavin-monooxygenase glucosinolate S-oxygenase 5 flavin-monooxygenase glucosinolate
S-oxygenase 5		 0.75 0.32 -0.31
24 AT1G23010 Cupredoxin superfamily protein Low Phosphate Root1 -0.75 0.32 -0.32
25 AT1G31710 Copper amine oxidase family protein 0.75 0.31 -0.31
26 AT3G26700 Protein kinase superfamily protein 0.74 0.32 -0.31
27 AT5G47240 nudix hydrolase homolog 8 nudix hydrolase homolog 8, nudix
hydrolase homolog 8		 0.74 0.33 -0.29
28 AT3G26670 Protein of unknown function (DUF803) 0.74 0.31 -0.32
29 AT2G18770 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.74 0.32 -0.33
30 AT5G03630 Pyridine nucleotide-disulphide oxidoreductase family
protein		 ATMDAR2 0.73 0.32 -0.32
31 AT5G50350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 -0.73 0.32 -0.32
32 AT4G39940 APS-kinase 2 APS-kinase 2,
ADENOSINE-5'-PHOSPHOSULFATE (APS)
KINASE 2		 0.73 0.31 -0.31
33 AT3G50270 HXXXD-type acyl-transferase family protein 0.72 0.31 -0.31
34 AT4G36030 armadillo repeat only 3 armadillo repeat only 3 0.72 0.31 -0.31
35 AT2G31230 ethylene-responsive element binding factor 15 ethylene-responsive element
binding factor 15,
ethylene-responsive element
binding factor 15		 0.72 0.31 -0.3
36 AT2G43550 Scorpion toxin-like knottin superfamily protein 0.72 0.31 -0.3
37 AT3G05230 Signal peptidase subunit 0.72 0.28 -0.32
38 AT1G44790 ChaC-like family protein 0.72 0.32 -0.3
39 AT1G54510 NIMA-related serine/threonine kinase 1 NIMA-related serine/threonine
kinase 1, NIMA-related
serine/threonine kinase 1		 -0.71 0.31 -0.32
40 AT5G44720 Molybdenum cofactor sulfurase family protein 0.71 0.32 -0.31
41 AT1G24100 UDP-glucosyl transferase 74B1 UDP-glucosyl transferase 74B1 0.71 0.32 -0.31
42 AT5G48480 Lactoylglutathione lyase / glyoxalase I family protein -0.71 0.3 -0.29
43 AT4G30060 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.71 0.32 -0.31
44 AT5G05680 nuclear pore complex protein-related EMBRYO DEFECTIVE 2789, MODIFIER OF
SNC1,7		 -0.71 0.32 -0.34
45 AT2G43520 trypsin inhibitor protein 2 trypsin inhibitor protein 2,
trypsin inhibitor protein 2		 0.71 0.3 -0.31
46 AT5G47910 respiratory burst oxidase homologue D ATRBOHD, respiratory burst oxidase
homologue D		 0.71 0.31 -0.32
47 AT3G25070 RPM1 interacting protein 4 RPM1 interacting protein 4 0.7 0.33 -0.29
48 AT3G55960 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.7 0.3 -0.31
49 AT1G69370 chorismate mutase 3 cm-3, chorismate mutase 3 0.7 0.31 -0.31
50 AT1G11440 BEST Arabidopsis thaliana protein match is: glycine-rich
protein (TAIR:AT3G29075.1); Has 19337 Blast hits to 8589
proteins in 488 species: Archae - 26; Bacteria - 641;
Metazoa - 7852; Fungi - 2167; Plants - 955; Viruses - 616;
Other Eukaryotes - 7080 (source: NCBI BLink).		 0.7 0.29 -0.32
51 AT5G03070 importin alpha isoform 9 importin alpha isoform 9 -0.7 0.3 -0.3
52 AT2G18550 homeobox protein 21 homeobox protein 21, homeobox-2,
homeobox protein 21		 -0.7 0.34 -0.3
53 AT5G23820 MD-2-related lipid recognition domain-containing protein 0.7 0.33 -0.31
54 AT3G23550 MATE efflux family protein 0.69 0.31 -0.32
55 AT5G67150 HXXXD-type acyl-transferase family protein 0.69 0.32 -0.33
56 AT4G27510 unknown protein; Has 25 Blast hits to 23 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.69 0.32 -0.32
57 AT1G19580 gamma carbonic anhydrase 1 gamma carbonic anhydrase 1 0.69 0.32 -0.33
58 AT1G05500 Calcium-dependent lipid-binding (CaLB domain) family
protein		 ARABIDOPSIS THALIANA SYNAPTOTAGMIN
HOMOLOG E, NTMC2T2.1,
NTMC2TYPE2.1, synaptotagmin 5,
SYNAPTOTAGMIN HOMOLOG E		 0.69 0.32 -0.3
59 AT1G31710 Copper amine oxidase family protein 0.69 0.32 -0.3
60 AT2G39890 proline transporter 1 PROLINE TRANSPORTER 1, proline
transporter 1		 0.68 0.34 -0.33
61 AT1G78260 RNA-binding (RRM/RBD/RNP motifs) family protein 0.68 0.33 -0.29
62 AT1G78560 Sodium Bile acid symporter family 0.68 0.32 -0.32
63 AT3G24503 aldehyde dehydrogenase 2C4 aldehyde dehydrogenase 1A,
aldehyde dehydrogenase 2C4,
REDUCED EPIDERMAL FLUORESCENCE1		 0.68 0.31 -0.31
64 AT1G12320 Protein of unknown function (DUF1442) 0.68 0.34 -0.31
65 AT5G44860 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G19950.1); Has 233 Blast hits
to 227 proteins in 25 species: Archae - 0; Bacteria - 13;
Metazoa - 1; Fungi - 0; Plants - 216; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 0.68 0.31 -0.33
66 AT1G72175 RING/U-box protein with domain of unknown function (DUF
1232)		 0.68 0.32 -0.33
67 AT1G22050 membrane-anchored ubiquitin-fold protein 6 precursor membrane-anchored ubiquitin-fold
protein 6 precursor		 0.68 0.33 -0.3
68 AT4G21780 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.68 0.33 -0.31
69 AT1G66350 RGA-like 1 RGL, RGA-like 1 0.68 0.33 -0.33
70 AT5G19100 Eukaryotic aspartyl protease family protein 0.67 0.31 -0.3
71 AT3G15810 Protein of unknown function (DUF567) 0.67 0.33 -0.34
72 AT4G10770 oligopeptide transporter 7 ARABIDOPSIS THALIANA OLIGOPEPTIDE
TRANSPORTER 7, oligopeptide
transporter 7		 0.66 0.32 -0.31
73 AT3G16690 Nodulin MtN3 family protein AtSWEET16, SWEET16 0.66 0.33 -0.3
74 AT3G28930 AIG2-like (avirulence induced gene) family protein AVRRPT2-INDUCED GENE 2 0.66 0.34 -0.31
75 AT1G75960 AMP-dependent synthetase and ligase family protein 0.66 0.33 -0.32
76 AT1G12110 nitrate transporter 1.1 ARABIDOPSIS THALIANA NITRATE
TRANSPORTER 1, B-1, CHLORINA 1,
CHL1-1, NITRATE TRANSPORTER 1,
nitrate transporter 1.1		 0.65 0.32 -0.32
77 AT3G17030 Nucleic acid-binding proteins superfamily -0.65 0.32 -0.3
78 AT1G15400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast
hits to 82 proteins in 16 species: Archae - 0; Bacteria -
4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 0.65 0.3 -0.32
79 AT4G18550 alpha/beta-Hydrolases superfamily protein Arabidopsis thaliana DAD1-like
seeding establishment-related
lipase, DAD1-like seeding
establishment-related lipase		 -0.65 0.3 -0.33
80 AT1G71350 eukaryotic translation initiation factor SUI1 family
protein		 -0.65 0.31 -0.31
81 AT5G60800 Heavy metal transport/detoxification superfamily protein 0.65 0.33 -0.32
82 AT4G36180 Leucine-rich receptor-like protein kinase family protein -0.65 0.32 -0.34
83 AT3G01850 Aldolase-type TIM barrel family protein 0.65 0.33 -0.36
84 AT4G29740 cytokinin oxidase 4 ATCKX4, cytokinin oxidase 4 0.64 0.32 -0.3
85 AT5G26720 unknown protein; Has 15 Blast hits to 15 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.64 0.32 -0.3
86 AT1G31670 Copper amine oxidase family protein 0.64 0.29 -0.33
87 AT2G46650 cytochrome B5 isoform C ARABIDOPSIS CYTOCHROME B5 ISOFORM
C, B5 #1, cytochrome B5 isoform C		 0.64 0.32 -0.32
88 AT1G18590 sulfotransferase 17 SULFOTRANSFERASE 17, ARABIDOPSIS
SULFOTRANSFERASE 5C,
sulfotransferase 17		 0.64 0.3 -0.31
89 AT5G09650 pyrophosphorylase 6 pyrophosphorylase 6,
pyrophosphorylase 6		 0.64 0.33 -0.31
90 AT1G05160 cytochrome P450, family 88, subfamily A, polypeptide 3 ATKAO1, cytochrome P450, family
88, subfamily A, polypeptide 3,
ENT-KAURENOIC ACID OXYDASE 1		 -0.64 0.33 -0.32
91 AT1G67950 RNA-binding (RRM/RBD/RNP motifs) family protein 0.64 0.33 -0.32
92 AT4G04830 methionine sulfoxide reductase B5 methionine sulfoxide reductase B5,
methionine sulfoxide reductase B5		 0.64 0.32 -0.3
93 AT4G37890 Zinc finger (C3HC4-type RING finger) family protein embryo sac development arrest 40 -0.64 0.31 -0.32
94 AT5G47600 HSP20-like chaperones superfamily protein -0.63 0.32 -0.32
95 AT2G02090 SNF2 domain-containing protein / helicase domain-containing
protein		 CHA19, CHROMATIN REMODELING 19,
ETL1		 -0.63 0.32 -0.31
96 AT1G14730 Cytochrome b561/ferric reductase transmembrane protein
family		 -0.63 0.32 -0.31
97 AT1G13330 Arabidopsis Hop2 homolog Arabidopsis Hop2 homolog -0.63 0.31 -0.33
98 AT1G25320 Leucine-rich repeat protein kinase family protein -0.63 0.32 -0.31
99 AT1G33790 jacalin lectin family protein -0.62 0.3 -0.32
100 AT2G27590 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.62 0.31 -0.33
101 AT4G08150 KNOTTED-like from Arabidopsis thaliana BREVIPEDICELLUS, BREVIPEDICELLUS
1, KNOTTED-like from Arabidopsis
thaliana		 -0.62 0.33 -0.28
102 AT2G21300 ATP binding microtubule motor family protein -0.62 0.28 -0.33
103 AT3G53040 late embryogenesis abundant protein, putative / LEA
protein, putative		 -0.62 0.31 -0.32
104 AT4G37580 Acyl-CoA N-acyltransferases (NAT) superfamily protein CONSTITUTIVE PHOTOMORPHOGENIC 3,
HOOKLESS 1, UNUSUAL SUGAR RESPONSE
2		 -0.62 0.3 -0.32
105 AT2G47250 RNA helicase family protein -0.62 0.32 -0.31
106 AT5G56240 BEST Arabidopsis thaliana protein match is: hapless 8
(TAIR:AT5G56250.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 -0.61 0.32 -0.31
107 AT3G21090 ABC-2 type transporter family protein ATP-binding cassette G15 -0.61 0.31 -0.3
108 AT2G40650 PRP38 family protein -0.61 0.31 -0.31
109 AT2G17410 ARID/BRIGHT DNA-binding domain-containing protein -0.61 0.3 -0.3
110 AT2G22590 UDP-Glycosyltransferase superfamily protein -0.6 0.3 -0.31
111 AT5G50720 HVA22 homologue E ARABIDOPSIS THALIANA HVA22
HOMOLOGUE E, HVA22 homologue E		 -0.6 0.31 -0.33
112 AT1G75640 Leucine-rich receptor-like protein kinase family protein -0.6 0.33 -0.31
113 AT1G15940 Tudor/PWWP/MBT superfamily protein -0.6 0.3 -0.31
114 AT3G19120 PIF / Ping-Pong family of plant transposases -0.59 0.32 -0.32
115 AT5G17440 LUC7 related protein -0.59 0.32 -0.33
116 AT3G14280 unknown protein; Has 51 Blast hits to 51 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.59 0.31 -0.31
117 AT4G00990 Transcription factor jumonji (jmjC) domain-containing
protein		 -0.59 0.31 -0.32
118 AT2G37030 SAUR-like auxin-responsive protein family -0.59 0.33 -0.31
119 AT2G32280 Protein of unknown function (DUF1218) -0.59 0.32 -0.31
120 AT3G02210 COBRA-like protein 1 precursor COBRA-like protein 1 precursor -0.58 0.31 -0.31
121 AT2G36350 Protein kinase superfamily protein -0.58 0.3 -0.32
122 AT3G14560 unknown protein; Has 6 Blast hits to 6 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.58 0.3 -0.29
123 AT2G41260 glycine-rich protein / late embryogenesis abundant protein
(M17)		 ATM17, M17 -0.58 0.32 -0.31
124 AT4G16442 Uncharacterised protein family (UPF0497) -0.58 0.32 -0.32
125 AT1G48560 unknown protein; Has 75 Blast hits to 71 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0;
Plants - 69; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.58 0.31 -0.29
126 AT3G22440 FRIGIDA-like protein -0.58 0.3 -0.31
127 AT1G55760 BTB/POZ domain-containing protein -0.58 0.33 -0.32
128 AT2G33830 Dormancy/auxin associated family protein -0.57 0.32 -0.3
129 AT3G05130 BEST Arabidopsis thaliana protein match is: Prefoldin
chaperone subunit family protein (TAIR:AT5G27330.1); Has
171032 Blast hits to 82560 proteins in 3364 species: Archae
- 2835; Bacteria - 33550; Metazoa - 71995; Fungi - 13365;
Plants - 9598; Viruses - 592; Other Eukaryotes - 39097
(source: NCBI BLink).		 -0.57 0.3 -0.31
130 AT5G54510 Auxin-responsive GH3 family protein DWARF IN LIGHT 1, GH3.6 -0.57 0.3 -0.32
131 AT1G50660 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G20350.1); Has 21445 Blast hits to 15134 proteins
in 1325 species: Archae - 461; Bacteria - 2309; Metazoa -
11052; Fungi - 1737; Plants - 1035; Viruses - 42; Other
Eukaryotes - 4809 (source: NCBI BLink).		 -0.57 0.3 -0.32
132 AT2G02850 plantacyanin plantacyanin -0.56 0.3 -0.32
133 AT2G39810 ubiquitin-protein ligases HIGH EXPRESSION OF OSMOTICALLY
RESPONSIVE GENES 1		 -0.56 0.34 -0.29
134 AT5G02520 CONTAINS InterPro DOMAIN/s: SANT associated
(InterPro:IPR015216); BEST Arabidopsis thaliana protein
match is: kinase interacting family protein
(TAIR:AT1G58210.1); Has 842 Blast hits to 736 proteins in
154 species: Archae - 2; Bacteria - 99; Metazoa - 236;
Fungi - 52; Plants - 90; Viruses - 0; Other Eukaryotes -
363 (source: NCBI BLink).		 -0.56 0.33 -0.3