AT4G17245 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G17245
Description RING/U-box superfamily protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G17245 RING/U-box superfamily protein 1 0.33 -0.3
2 AT2G17880 Chaperone DnaJ-domain superfamily protein 0.76 0.33 -0.31
3 AT5G24400 NagB/RpiA/CoA transferase-like superfamily protein EMBRYO DEFECTIVE 2024,
6-PHOSPHOGLUCONOLACTONASE 3		 0.71 0.29 -0.3
4 AT1G54310 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.71 0.32 -0.32
5 AT2G25800 Protein of unknown function (DUF810) 0.69 0.32 -0.33
6 AT1G49850 RING/U-box superfamily protein 0.68 0.33 -0.34
7 AT3G25170 ralf-like 26 ralf-like 26 -0.67 0.34 -0.31
8 AT2G06150 transposable element gene -0.67 0.32 -0.33
9 AT2G42870 phy rapidly regulated 1 HELIX-LOOP-HELIX 1, PHY RAPIDLY
REGULATED 1		 0.67 0.35 -0.31
10 AT5G45380 solute:sodium symporters;urea transmembrane transporters ATDUR3, DEGRADATION OF UREA 3 -0.67 0.33 -0.31
11 AT4G10910 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.66 0.33 -0.33
12 AT1G12230 Aldolase superfamily protein 0.66 0.31 -0.35
13 AT1G22570 Major facilitator superfamily protein 0.65 0.32 -0.32
14 AT5G14240 Thioredoxin superfamily protein 0.65 0.32 -0.31
15 AT2G19300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 4 Blast hits to 4 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.65 0.34 -0.31
16 AT4G04660 pseudogene, hypothetical protein, similar to zinc finger
protein (Arabidopsis thaliana) GI:976277		 0.65 0.33 -0.31
17 AT5G04190 phytochrome kinase substrate 4 phytochrome kinase substrate 4 0.64 0.33 -0.29
18 AT4G28720 Flavin-binding monooxygenase family protein YUCCA 8 0.64 0.3 -0.31
19 AT4G03860 transposable element gene 0.63 0.31 -0.31
20 AT1G09410 pentatricopeptide (PPR) repeat-containing protein 0.63 0.31 -0.33
21 AT2G32710 Cyclin-dependent kinase inhibitor family protein CYCLIN-DEPENDENT KINASE INHIBITOR
2, INTERACTORS OF CDC2 KINASE 7,
KRP4, KIP-RELATED PROTEIN 4		 0.63 0.3 -0.31
22 AT5G46300 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.62 0.31 -0.33
23 AT3G60600 vesicle associated protein (AT)VAP, vesicle associated
protein, VAP27,
VAMP/SYNAPTOBREVIN-ASSOCIATED
PROTEIN 27-1		 0.62 0.3 -0.28
24 AT5G65960 GTP binding 0.61 0.34 -0.3
25 AT2G18450 succinate dehydrogenase 1-2 succinate dehydrogenase 1-2 0.61 0.32 -0.33
26 AT3G44270 transposable element gene 0.61 0.32 -0.3
27 AT1G79660 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G16170.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.61 0.33 -0.3
28 AT2G21460 transposable element gene 0.61 0.32 -0.32
29 AT4G05330 ARF-GAP domain 13 ARF-GAP domain 13 0.61 0.29 -0.3
30 AT2G38490 CBL-interacting protein kinase 22 CBL-interacting protein kinase 22,
SNF1-RELATED PROTEIN KINASE 3.19		 -0.61 0.3 -0.33
31 AT3G60530 GATA transcription factor 4 GATA transcription factor 4 0.61 0.31 -0.31
32 AT3G14860 NHL domain-containing protein 0.61 0.33 -0.32
33 AT5G43670 Sec23/Sec24 protein transport family protein 0.6 0.32 -0.29
34 AT1G38340 transposable element gene -0.6 0.31 -0.32
35 AT4G25170 Uncharacterised conserved protein (UCP012943) 0.6 0.3 -0.31
36 AT3G11200 alfin-like 2 alfin-like 2 0.6 0.31 -0.29
37 AT4G04300 transposable element gene 0.6 0.33 -0.33
38 AT5G18090 AP2/B3-like transcriptional factor family protein 0.6 0.29 -0.33
39 AT4G09610 GAST1 protein homolog 2 GAST1 protein homolog 2 0.6 0.31 -0.31
40 AT3G15370 expansin 12 ATEXP12, expansin 12, ATHEXP ALPHA
1.24, EXPANSIN 12, expansin 12		 0.6 0.33 -0.31
41 AT3G57630 exostosin family protein -0.6 0.31 -0.3
42 AT1G70250 receptor serine/threonine kinase, putative -0.59 0.31 -0.3
43 AT1G33460 transposable element gene 0.59 0.35 -0.32
44 AT1G31240 Bromodomain transcription factor 0.59 0.33 -0.29
45 AT1G14890 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.59 0.32 -0.32
46 AT3G30730 unknown protein; Has 59 Blast hits to 59 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.59 0.31 -0.32
47 AT4G04500 cysteine-rich RLK (RECEPTOR-like protein kinase) 37 cysteine-rich RLK (RECEPTOR-like
protein kinase) 37		 -0.59 0.3 -0.33
48 AT4G23496 SPIRAL1-like5 SPIRAL1-like5 -0.59 0.31 -0.32
49 AT4G27880 Protein with RING/U-box and TRAF-like domains 0.59 0.3 -0.3
50 AT1G56150 SAUR-like auxin-responsive protein family 0.59 0.32 -0.31
51 AT2G23400 Undecaprenyl pyrophosphate synthetase family protein -0.58 0.32 -0.33
52 AT4G24500 hydroxyproline-rich glycoprotein family protein 0.58 0.31 -0.3
53 AT4G29260 HAD superfamily, subfamily IIIB acid phosphatase 0.58 0.32 -0.31
54 AT3G10770 Single-stranded nucleic acid binding R3H protein 0.58 0.33 -0.3
55 AT1G09575 Protein of unknown function (DUF607) 0.58 0.3 -0.33
56 AT1G57906 unknown protein; BEST Arabidopsis thaliana protein match
is: F-box family protein with a domain of unknown function
(DUF295) (TAIR:AT2G17690.1); Has 57 Blast hits to 57
proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.58 0.31 -0.33
57 AT3G12920 SBP (S-ribonuclease binding protein) family protein BOI-related gene 3 0.58 0.35 -0.32
58 AT2G47670 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.57 0.32 -0.31
59 AT4G31950 cytochrome P450, family 82, subfamily C, polypeptide 3 cytochrome P450, family 82,
subfamily C, polypeptide 3		 -0.57 0.3 -0.31
60 AT2G19630 F-box and associated interaction domains-containing protein -0.57 0.31 -0.31
61 AT4G11840 phospholipase D gamma 3 phospholipase D gamma 3 -0.57 0.31 -0.32
62 AT3G11760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G04860.1); Has 84 Blast hits to 73 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.57 0.32 -0.32
63 AT3G22640 cupin family protein PAP85 0.57 0.35 -0.34
64 AT5G44250 Protein of unknown function DUF829, transmembrane 53 0.57 0.27 -0.3
65 AT3G53030 ser/arg-rich protein kinase 4 ser/arg-rich protein kinase 4 0.57 0.31 -0.31
66 AT2G30380 Plant protein of unknown function (DUF641) -0.57 0.3 -0.33
67 AT1G21050 Protein of unknown function, DUF617 0.57 0.3 -0.33
68 AT5G60900 receptor-like protein kinase 1 receptor-like protein kinase 1 -0.56 0.33 -0.29
69 AT5G11400 Protein kinase superfamily protein -0.55 0.32 -0.3
70 AT5G20390 Glycosyl hydrolase superfamily protein -0.55 0.33 -0.32
71 AT3G28540 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.55 0.33 -0.29
72 AT4G15755 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.54 0.31 -0.31
73 AT1G15790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15780.1); Has 170 Blast hits
to 94 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.54 0.33 -0.31
74 AT3G22930 calmodulin-like 11 calmodulin-like 11 -0.53 0.31 -0.3
75 AT2G17960 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.53 0.31 -0.3
76 AT5G07510 glycine-rich protein 14 ARABIDOPSIS THALIANA GLYCINE-RICH
PROTEIN 4, ARABIDOPSIS THALIANA
GLYCINE-RICH PROTEIN 14,
GLYCINE-RICH PROTEIN 4,
glycine-rich protein 14		 -0.52 0.32 -0.3
77 AT5G46470 disease resistance protein (TIR-NBS-LRR class) family RESISTANT TO P. SYRINGAE 6 -0.52 0.31 -0.34
78 AT4G23960 F-box family protein -0.52 0.32 -0.31
79 AT1G22275 Myosin heavy chain-related protein ZYP1, ZYP1b -0.52 0.33 -0.29
80 AT5G10420 MATE efflux family protein -0.52 0.32 -0.34
81 AT1G49000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: stem; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT3G18560.1); Has
105 Blast hits to 105 proteins in 13 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.52 0.31 -0.3
82 AT2G34120 Cytochrome C oxidase polypeptide VIB family protein -0.5 0.31 -0.32
83 AT3G57960 Emsy N Terminus (ENT) domain-containing protein -0.5 0.29 -0.3
84 AT2G24160 pseudogene, leucine rich repeat protein family, contains
leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; contains some similarity to Cf-4
(Lycopersicon hirsutum) gi|2808683|emb|CAA05268; blastp
match of 37% identity and 8.4e-98 P-value to
GP|2808683|emb|CAA05268.1||AJ002235 Cf-4 {Lycopersicon
hirsutum}		 -0.49 0.31 -0.31
85 AT3G28830 Protein of unknown function (DUF1216) -0.49 0.32 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
86 C0126 Isorhamnetin-dirhamnoside - - - 0.73 0.43 -0.45
87 C0138 Linarin - - - 0.72 0.44 -0.43