AT4G14210 : PIGMENT DEFECTIVE 226
Query Information
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AGICode AT4G14210
Description phytoene desaturase 3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G14210 phytoene desaturase 3 PIGMENT DEFECTIVE 226, PHYTOENE
DESATURASE, phytoene desaturase 3		 1 0.32 -0.34
2 AT1G01790 K+ efflux antiporter 1 K+ EFFLUX ANTIPORTER 1, K+ efflux
antiporter 1		 0.85 0.34 -0.32
3 AT3G27925 DegP protease 1 DegP protease 1, DegP protease 1 0.83 0.33 -0.32
4 AT5G45170 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.83 0.32 -0.31
5 AT5G19220 ADP glucose pyrophosphorylase large subunit 1 ADP GLUCOSE PYROPHOSPHORYLASE 2,
ADP glucose pyrophosphorylase
large subunit 1		 0.82 0.35 -0.34
6 AT1G18060 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 74 Blast hits to 74
proteins in 29 species: Archae - 0; Bacteria - 19; Metazoa
- 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes
- 6 (source: NCBI BLink).		 0.8 0.33 -0.3
7 AT2G30170 Protein phosphatase 2C family protein 0.8 0.33 -0.32
8 AT2G38330 MATE efflux family protein 0.79 0.31 -0.32
9 AT1G79790 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 Arabidopsis thaliana chloroplast
FMN hydrolase 1, flavin
mononucleotide hydrolase 1		 0.79 0.3 -0.31
10 AT5G62790 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1-deoxy-D-xylulose 5-phosphate
reductoisomerase,
PIGMENT-DEFECTIVE EMBRYO 129		 0.78 0.32 -0.31
11 AT4G26860 Predicted pyridoxal phosphate-dependent enzyme, YBL036C
type		 0.78 0.32 -0.32
12 AT3G10350 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.78 0.3 -0.32
13 AT5G58140 phototropin 2 NON PHOTOTROPIC HYPOCOTYL 1-LIKE,
phototropin 2		 0.78 0.32 -0.33
14 AT1G56500 haloacid dehalogenase-like hydrolase family protein 0.78 0.33 -0.31
15 AT1G67840 chloroplast sensor kinase chloroplast sensor kinase 0.78 0.31 -0.31
16 AT1G77490 thylakoidal ascorbate peroxidase thylakoidal ascorbate peroxidase 0.77 0.32 -0.34
17 AT1G12750 RHOMBOID-like protein 6 RHOMBOID-like protein 6,
RHOMBOID-like protein 6		 0.77 0.28 -0.31
18 AT2G03390 uvrB/uvrC motif-containing protein 0.77 0.32 -0.31
19 AT5G04440 Protein of unknown function (DUF1997) 0.77 0.29 -0.3
20 AT4G23940 FtsH extracellular protease family 0.76 0.3 -0.33
21 AT5G16540 zinc finger nuclease 3 zinc finger nuclease 3 0.76 0.32 -0.3
22 AT5G03880 Thioredoxin family protein 0.76 0.3 -0.31
23 AT2G38460 iron regulated 1 ARABIDOPSIS THALIANA
IRON-REGULATED PROTEIN 1,
FERROPORTIN 1, iron regulated 1		 0.76 0.31 -0.29
24 AT5G57960 GTP-binding protein, HflX 0.76 0.33 -0.32
25 AT1G51110 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.76 0.32 -0.33
26 AT2G24270 aldehyde dehydrogenase 11A3 aldehyde dehydrogenase 11A3 0.75 0.32 -0.31
27 AT2G04700 ferredoxin thioredoxin reductase catalytic beta chain
family protein		 0.75 0.3 -0.32
28 ATCG00570 photosystem II reaction center protein F photosystem II reaction center
protein F		 0.75 0.32 -0.32
29 AT1G65260 plastid transcriptionally active 4 plastid transcriptionally active
4, VESICLE-INDUCING PROTEIN IN
PLASTIDS 1		 0.74 0.33 -0.3
30 AT2G39690 Protein of unknown function, DUF547 0.74 0.31 -0.32
31 AT1G04620 coenzyme F420 hydrogenase family / dehydrogenase, beta
subunit family		 7-hydroxymethyl chlorophyll a
(HMChl) reductase		 0.74 0.32 -0.31
32 AT1G07010 Calcineurin-like metallo-phosphoesterase superfamily
protein		 AtSLP1, Shewenella-like protein
phosphatase 1		 0.74 0.32 -0.32
33 AT1G35340 ATP-dependent protease La (LON) domain protein 0.74 0.32 -0.3
34 AT3G02830 zinc finger protein 1 zinc finger protein 1 0.74 0.31 -0.31
35 AT5G44380 FAD-binding Berberine family protein -0.73 0.34 -0.33
36 AT1G29700 Metallo-hydrolase/oxidoreductase superfamily protein 0.73 0.31 -0.31
37 AT4G33500 Protein phosphatase 2C family protein 0.73 0.31 -0.32
38 AT3G13480 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G55475.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.73 0.32 -0.33
39 AT1G05230 homeodomain GLABROUS 2 homeodomain GLABROUS 2 0.73 0.3 -0.33
40 AT4G28680 L-tyrosine decarboxylase L-tyrosine decarboxylase,
L-TYROSINE DECARBOXYLASE 1		 0.72 0.33 -0.31
41 AT5G61670 Encodes a close homolog of the Cauliflower OR (Orange)
protein. The function of OR is to induce the
differentiation of proplastids or other noncolored plastids
into chromoplasts for carotenoid accumulation. Both
proteins contain a Cysteine-rich zinc finger domain that is
highly specific to DnaJ-like molecular chaperons.		 0.72 0.3 -0.3
42 AT3G23310 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 0.72 0.33 -0.31
43 AT1G76570 Chlorophyll A-B binding family protein 0.72 0.3 -0.32
44 AT4G24460 CRT (chloroquine-resistance transporter)-like transporter 2 CRT (chloroquine-resistance
transporter)-like transporter 2		 0.72 0.33 -0.3
45 AT1G21065 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Uncharacterised protein family UPF0047
(InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins
in 1137 species: Archae - 215; Bacteria - 2154; Metazoa -
42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes
- 1191 (source: NCBI BLink).		 0.72 0.32 -0.34
46 AT2G22190 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 trehalose-6-phosphate phosphatase
E		 0.72 0.32 -0.32
47 AT5G12130 integral membrane TerC family protein TELLURITE RESISTANCE C, PIGMENT
DEFECTIVE 149		 0.72 0.33 -0.31
48 AT2G01140 Aldolase superfamily protein PIGMENT DEFECTIVE 345 -0.72 0.3 -0.3
49 AT2G31040 ATP synthase protein I -related 0.72 0.3 -0.31
50 AT2G17340 Uncharacterised conserved protein (UCP030210) 0.71 0.3 -0.32
51 AT1G68830 STT7 homolog STN7 STT7 homolog STN7 0.71 0.32 -0.33
52 AT1G53230 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor
3		 TEOSINTE BRANCHED 1, cycloidea and
PCF transcription factor 3		 0.71 0.32 -0.3
53 AT5G03910 ABC2 homolog 12 ATP-binding cassette B29,
ARABIDOPSIS THALIANA ABC
TRANSPORTER HOMOLOG 12, ABC2
homolog 12		 0.71 0.33 -0.32
54 AT1G07260 UDP-glucosyl transferase 71C3 UDP-glucosyl transferase 71C3 -0.7 0.32 -0.29
55 AT5G60760 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.69 0.33 -0.32
56 AT3G15300 VQ motif-containing protein -0.69 0.32 -0.32
57 AT1G01640 BTB/POZ domain-containing protein -0.68 0.3 -0.33
58 AT5G01830 ARM repeat superfamily protein -0.68 0.29 -0.32
59 AT2G18390 ADP-ribosylation factor family protein ARF-LIKE 2, ATARLC1, HALLIMASCH,
TITAN 5		 -0.67 0.3 -0.3
60 AT4G37870 phosphoenolpyruvate carboxykinase 1 phosphoenolpyruvate carboxykinase
1, PHOSPHOENOLPYRUVATE
CARBOXYKINASE		 -0.67 0.28 -0.31
61 AT5G37740 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.67 0.32 -0.31
62 AT5G01870 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.66 0.31 -0.31
63 AT1G17060 cytochrome p450 72c1 CHIBI 2, cytochrome p450 72c1,
SHRINK 1, SUPPRESSOR OF PHYB-4 7		 -0.66 0.3 -0.29
64 AT5G14690 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G01516.1); Has 86 Blast hits
to 86 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 2; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.31 -0.31
65 AT2G24260 LJRHL1-like 1 LJRHL1-like 1 -0.66 0.32 -0.3
66 AT3G26770 NAD(P)-binding Rossmann-fold superfamily protein -0.66 0.33 -0.3
67 AT4G33560 Wound-responsive family protein -0.65 0.31 -0.32
68 AT2G37750 unknown protein; Has 21 Blast hits to 21 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.34 -0.31
69 AT5G14000 NAC domain containing protein 84 NAC domain containing protein 84,
NAC domain containing protein 84		 -0.65 0.32 -0.31
70 AT2G42570 TRICHOME BIREFRINGENCE-LIKE 39 TRICHOME BIREFRINGENCE-LIKE 39 -0.64 0.31 -0.31
71 AT1G19530 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation, anaerobic
respiration; LOCATED IN: cellular_component unknown;
EXPRESSED IN: leaf apex, inflorescence meristem, hypocotyl,
root, flower; EXPRESSED DURING: petal differentiation and
expansion stage; Has 47 Blast hits to 47 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.64 0.32 -0.32
72 AT2G46950 cytochrome P450, family 709, subfamily B, polypeptide 2 cytochrome P450, family 709,
subfamily B, polypeptide 2		 -0.64 0.33 -0.31
73 AT5G43780 Pseudouridine synthase/archaeosine transglycosylase-like
family protein		 APS4 -0.63 0.32 -0.31
74 AT3G24450 Heavy metal transport/detoxification superfamily protein -0.63 0.32 -0.37
75 AT1G20900 Predicted AT-hook DNA-binding family protein AT-hook motif nuclear-localized
protein 27, ESCAROLA, ORESARA 7		 -0.63 0.31 -0.31
76 AT2G25980 Mannose-binding lectin superfamily protein -0.63 0.3 -0.32
77 AT1G67030 zinc finger protein 6 zinc finger protein 6 -0.62 0.33 -0.32
78 AT5G16510 Alpha-1,4-glucan-protein synthase family protein reversibly glycosylated
polypeptide 5, reversibly
glycosylated protein 5		 -0.62 0.3 -0.29
79 AT1G61040 plus-3 domain-containing protein vernalization independence 5 -0.62 0.31 -0.32
80 AT5G59305 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 8 plant structures;
EXPRESSED DURING: F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage, D bilateral stage; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.62 0.32 -0.29
81 AT2G35270 Predicted AT-hook DNA-binding family protein GIANT KILLER -0.62 0.32 -0.28
82 AT5G03860 malate synthase malate synthase -0.62 0.32 -0.29
83 AT5G12330 Lateral root primordium (LRP) protein-related LATERAL ROOT PRIMORDIUM 1 -0.62 0.31 -0.33
84 AT4G40070 RING/U-box superfamily protein -0.61 0.34 -0.29
85 AT3G12500 basic chitinase basic chitinase, B-CHI, CHI-B,
basic chitinase,
PATHOGENESIS-RELATED 3,
PATHOGENESIS-RELATED 3		 -0.6 0.31 -0.31
86 AT5G66985 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.6 0.31 -0.3
87 AT2G47270 sequence-specific DNA binding transcription
factors;transcription regulators		 UPBEAT1 -0.6 0.32 -0.34
88 AT5G44920 Toll-Interleukin-Resistance (TIR) domain family protein -0.6 0.31 -0.33
89 AT1G08320 bZIP transcription factor family protein bZIP21, TGACG (TGA) motif-binding
protein 9		 -0.6 0.3 -0.32
90 AT2G37410 translocase inner membrane subunit 17-2 translocase inner membrane subunit
17-2, TRANSLOCASE OF THE INNER
MEMBRANE 17, translocase inner
membrane subunit 17-2		 -0.59 0.33 -0.31
91 AT1G76500 Predicted AT-hook DNA-binding family protein AT-hook motif nuclear-localized
protein 29, SUPPRESSOR OF PHYB-4#3		 -0.59 0.32 -0.32
92 AT4G32220 transposable element gene -0.59 0.32 -0.32
93 AT5G47750 D6 protein kinase like 2 D6 protein kinase like 2, PK5 -0.59 0.32 -0.32
94 AT5G67550 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower; EXPRESSED
DURING: 4 anthesis; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G71110.1); Has 161 Blast hits
to 154 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 161; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.29 -0.31
95 AT2G41070 Basic-leucine zipper (bZIP) transcription factor family
protein		 ATBZIP12, DPBF4, ENHANCED EM LEVEL -0.59 0.33 -0.29
96 AT5G03670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G36420.1); Has 700 Blast hits
to 624 proteins in 104 species: Archae - 0; Bacteria - 18;
Metazoa - 333; Fungi - 60; Plants - 73; Viruses - 24; Other
Eukaryotes - 192 (source: NCBI BLink).		 -0.58 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
97 C0192 Oxalic acid - Oxalate ascorbate degradation 0.77 0.43 -0.44 C0192
98 C0059 Arginine amide - - - 0.73 0.44 -0.43