AT4G17530 : RAB GTPase homolog 1C
Query Information
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AGICode AT4G17530
Description RAB GTPase homolog 1C
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G17530 RAB GTPase homolog 1C RAB GTPase homolog 1C, ATRABD2C,
RAB1C, RAB GTPase homolog 1C		 1 0.32 -0.31
2 AT1G29850 double-stranded DNA-binding family protein 0.84 0.32 -0.32
3 AT1G10940 Protein kinase superfamily protein ARABIDOPSIS SERINE/THREONINE
KINASE 1, SUCROSE NONFERMENTING
1-RELATED PROTEIN KINASE 2-4,
SNF1-related protein kinase 2.4,
SRK2A		 0.83 0.3 -0.35
4 AT5G17450 Heavy metal transport/detoxification superfamily protein heavy metal associated
isoprenylated plant protein 21		 0.8 0.31 -0.31
5 AT1G22750 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF1475 (InterPro:IPR009943);
Has 185 Blast hits to 155 proteins in 21 species: Archae -
0; Bacteria - 8; Metazoa - 3; Fungi - 0; Plants - 64;
Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink).		 0.79 0.31 -0.32
6 AT5G47200 RAB GTPase homolog 1A RAB GTPase homolog 1A, ARABIDOPSIS
RAB GTPASE HOMOLOG D2B, RAB GTPase
homolog 1A		 0.79 0.29 -0.3
7 AT5G48800 Phototropic-responsive NPH3 family protein -0.79 0.33 -0.31
8 AT2G34630 geranyl diphosphate synthase 1 GERANYLPYROPHOSPHATE SYNTHASE,
geranyl diphosphate synthase 1		 0.79 0.31 -0.33
9 AT4G35860 GTP-binding 2 GTP-binding 2, ATRAB2C, ATRABB1B,
GTP-binding 2		 0.78 0.31 -0.3
10 AT3G60820 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 PBF1 0.78 0.33 -0.31
11 AT2G26800 Aldolase superfamily protein 0.77 0.31 -0.31
12 AT1G06420 unknown protein; Has 1017 Blast hits to 654 proteins in 124
species: Archae - 0; Bacteria - 39; Metazoa - 232; Fungi -
69; Plants - 40; Viruses - 0; Other Eukaryotes - 637
(source: NCBI BLink).		 -0.77 0.32 -0.32
13 AT5G19855 Chaperonin-like RbcX protein AtRbcX2, homologue of
cyanobacterial RbcX 2		 0.76 0.33 -0.31
14 AT2G31570 glutathione peroxidase 2 glutathione peroxidase 2,
glutathione peroxidase 2		 0.76 0.31 -0.28
15 AT1G73670 MAP kinase 15 MAP kinase 15, MAP kinase 15 0.75 0.33 -0.3
16 AT5G09230 sirtuin 2 SIRTUIN 2, sirtuin 2 0.75 0.33 -0.31
17 AT4G17170 RAB GTPase homolog B1C AT-RAB2, ARABIDOPSIS RAB GTPASE
HOMOLOG B1B, ATRAB2A, ATRABB1C,
RAB GTPASE HOMOLOG B1B, RAB2A, RAB
GTPase homolog B1C		 0.75 0.32 -0.3
18 AT5G43745 Protein of unknown function (DUF1012) 0.75 0.31 -0.33
19 AT4G08170 Inositol 1,3,4-trisphosphate 5/6-kinase family protein 0.74 0.33 -0.31
20 AT3G16150 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 asparaginase B1 0.74 0.31 -0.35
21 AT2G16365 F-box family protein 0.74 0.31 -0.29
22 AT5G10490 MSCS-like 2 MSCS-like 2 0.73 0.32 -0.33
23 AT5G07820 Plant calmodulin-binding protein-related -0.73 0.34 -0.31
24 AT1G22300 general regulatory factor 10 14-3-3 PROTEIN G-BOX FACTOR14
EPSILON, GF14 EPSILON, general
regulatory factor 10		 0.73 0.29 -0.32
25 AT2G19460 Protein of unknown function (DUF3511) 0.73 0.34 -0.31
26 AT4G31870 glutathione peroxidase 7 GLUTATHIONE PEROXIDASE 7,
glutathione peroxidase 7		 0.73 0.31 -0.31
27 AT5G03520 RAB GTPase homolog 8C ARABIDOPSIS RAB HOMOLOG E1D, RAB
GTPase homolog 8C, ATRABE1D, RAB
HOMOLOG E1D, RAB GTPase homolog 8C		 0.72 0.33 -0.32
28 AT2G47730 glutathione S-transferase phi 8 GLUTATHIONE S-TRANSFERASE (CLASS
PHI) 5, Arabidopsis thaliana
glutathione S-transferase phi 8,
GST6, glutathione S-transferase
phi 8		 0.72 0.33 -0.31
29 AT1G56450 20S proteasome beta subunit G1 20S proteasome beta subunit G1 0.72 0.33 -0.31
30 AT5G42390 Insulinase (Peptidase family M16) family protein stromal processing peptidase 0.72 0.33 -0.3
31 AT5G59480 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.72 0.3 -0.32
32 AT1G43890 RAB GTPASE HOMOLOG B18 ARABIDOPSIS RAB GTPASE HOMOLOG C1,
ARABIDOPSIS RAB GTPASE HOMOLOG
B18, ARABIDOPSIS RAB GTPASE
HOMOLOG C1, RAB GTPASE HOMOLOG
B18, RAB GTPASE HOMOLOG 18-1, RAB
GTPASE HOMOLOG C1		 0.72 0.31 -0.31
33 AT2G27600 AAA-type ATPase family protein ATSKD1, SUPPRESSOR OF K+ TRANSPORT
GROWTH DEFECT1, VACUOLAR PROTEIN
SORTING 4		 0.72 0.32 -0.28
34 AT1G22020 serine hydroxymethyltransferase 6 serine hydroxymethyltransferase 6 0.72 0.33 -0.28
35 AT3G15090 GroES-like zinc-binding alcohol dehydrogenase family
protein		 0.72 0.32 -0.31
36 AT4G26690 PLC-like phosphodiesterase family protein Glycerophosphodiester
phosphodiesterase (GDPD) like 3,
GLYCEROPHOSPHODIESTERASE-LIKE 2,
MUTANT ROOT HAIR 5, SHAVEN 3		 0.71 0.3 -0.3
37 AT5G52570 beta-carotene hydroxylase 2 B2, BETA CAROTENOID HYDROXYLASE 2,
beta-carotene hydroxylase 2, CHY2		 0.71 0.31 -0.32
38 AT5G08260 serine carboxypeptidase-like 35 serine carboxypeptidase-like 35 -0.71 0.31 -0.3
39 AT1G77890 DNA-directed RNA polymerase II protein 0.7 0.28 -0.32
40 AT1G09130 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 0.7 0.33 -0.31
41 AT1G69570 Dof-type zinc finger DNA-binding family protein 0.7 0.33 -0.3
42 AT1G14000 VH1-interacting kinase VH1-interacting kinase 0.69 0.33 -0.31
43 AT1G52540 Protein kinase superfamily protein 0.69 0.31 -0.32
44 AT1G28200 FH interacting protein 1 FH interacting protein 1 0.69 0.33 -0.33
45 AT1G79600 Protein kinase superfamily protein 0.69 0.33 -0.29
46 AT5G06940 Leucine-rich repeat receptor-like protein kinase family
protein		 -0.69 0.33 -0.32
47 AT2G41710 Integrase-type DNA-binding superfamily protein -0.69 0.32 -0.33
48 AT2G01670 nudix hydrolase homolog 17 nudix hydrolase homolog 17, nudix
hydrolase homolog 17		 -0.69 0.32 -0.32
49 AT1G53160 squamosa promoter binding protein-like 4 squamosa promoter binding
protein-like 4		 -0.68 0.32 -0.29
50 AT3G23930 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: hypocotyl; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G13540.1); Has 10639 Blast hits to 7432 proteins
in 646 species: Archae - 82; Bacteria - 826; Metazoa -
5047; Fungi - 759; Plants - 314; Viruses - 86; Other
Eukaryotes - 3525 (source: NCBI BLink).		 -0.68 0.32 -0.33
51 AT1G07340 sugar transporter 2 sugar transporter 2, sugar
transporter 2		 -0.68 0.32 -0.3
52 AT1G80870 Protein kinase superfamily protein -0.68 0.32 -0.31
53 AT2G35170 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 -0.67 0.32 -0.31
54 AT4G18910 NOD26-like intrinsic protein 1;2 NOD26-LIKE INTRINSIC PROTEIN 2,
NOD26-like intrinsic protein 1;2,
NOD26-LIKE INTRINSIC PROTEIN 2		 -0.67 0.33 -0.34
55 AT5G66490 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 9 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G50900.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.66 0.34 -0.34
56 AT5G01700 Protein phosphatase 2C family protein -0.66 0.31 -0.33
57 AT3G20810 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 Jumonji C domain-containing
protein 30, jumonji domain
containing 5		 -0.65 0.31 -0.3
58 AT1G68220 Protein of unknown function (DUF1218) -0.65 0.32 -0.31
59 AT5G40460 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits
to 87 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.31 -0.34
60 AT5G25130 cytochrome P450, family 71, subfamily B, polypeptide 12 cytochrome P450, family 71,
subfamily B, polypeptide 12		 -0.64 0.32 -0.31
61 AT4G03570 Cystatin/monellin superfamily protein -0.63 0.32 -0.3
62 AT5G40920 pseudogene, disease resistance protein (TIR-NBS-LRR class),
putative, domain signature TIR-NBS-LRR exists, suggestive
of a disease resistance protein.		 -0.63 0.32 -0.32
63 AT2G37790 NAD(P)-linked oxidoreductase superfamily protein Aldo-keto reductase family 4
member C10		 -0.63 0.31 -0.33
64 AT2G44980 SNF2 domain-containing protein / helicase domain-containing
protein		 ALTERED SEED GERMINATION 3 -0.63 0.31 -0.31
65 AT3G05190 D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily protein		 -0.62 0.32 -0.29
66 AT4G39570 Galactose oxidase/kelch repeat superfamily protein -0.62 0.33 -0.32
67 AT2G38970 Zinc finger (C3HC4-type RING finger) family protein -0.62 0.31 -0.3
68 AT3G19540 Protein of unknown function (DUF620) -0.61 0.32 -0.32
69 AT1G49030 PLAC8 family protein -0.61 0.32 -0.33
70 AT5G62770 Protein of unknown function (DUF1645) -0.61 0.32 -0.33
71 AT1G29790 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.6 0.31 -0.32
72 AT5G25210 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G32030.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.6 0.31 -0.3
73 AT4G17080 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 -0.59 0.33 -0.34
74 AT1G60630 Leucine-rich repeat protein kinase family protein -0.59 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
75 C0180 MST_2539.9 - - - -0.76 0.46 -0.42
76 C0176 MST_2406.9 - - - -0.72 0.49 -0.47