AT4G17190 : farnesyl diphosphate synthase 2
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G17190
Description farnesyl diphosphate synthase 2
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G17190 farnesyl diphosphate synthase 2 farnesyl diphosphate synthase 2 1 0.32 -0.31
2 AT5G50000 Protein kinase superfamily protein 0.85 0.32 -0.31
3 AT5G15350 early nodulin-like protein 17 AtENODL17, early nodulin-like
protein 17		 0.77 0.32 -0.32
4 AT2G04780 FASCICLIN-like arabinoogalactan 7 FASCICLIN-like arabinoogalactan 7 0.77 0.32 -0.31
5 AT3G55350 PIF / Ping-Pong family of plant transposases 0.76 0.31 -0.32
6 AT2G19760 profilin 1 PROFILIN 1, profilin 1 0.76 0.32 -0.32
7 AT4G14600 Target SNARE coiled-coil domain protein 0.75 0.33 -0.31
8 AT3G09980 Family of unknown function (DUF662) 0.75 0.33 -0.29
9 AT4G15790 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; Has 411 Blast hits to
380 proteins in 121 species: Archae - 4; Bacteria - 107;
Metazoa - 85; Fungi - 29; Plants - 59; Viruses - 0; Other
Eukaryotes - 127 (source: NCBI BLink).		 0.75 0.32 -0.3
10 AT1G22330 RNA-binding (RRM/RBD/RNP motifs) family protein 0.75 0.32 -0.34
11 AT1G69480 EXS (ERD1/XPR1/SYG1) family protein -0.74 0.32 -0.3
12 AT3G48750 cell division control 2 cell division control 2, CDC2A,
CDC2AAT, CDK2, CDKA1, CDKA;1		 0.74 0.31 -0.31
13 AT3G05150 Major facilitator superfamily protein 0.74 0.35 -0.32
14 AT1G10630 ADP-ribosylation factor A1F ADP-ribosylation factor A1F,
ADP-ribosylation factor A1F		 0.74 0.33 -0.31
15 AT5G23860 tubulin beta 8 tubulin beta 8 0.74 0.31 -0.3
16 AT1G52910 Protein of unknown function (DUF1218) 0.73 0.33 -0.32
17 AT3G25040 endoplasmic reticulum retention defective 2B endoplasmic reticulum retention
defective 2B		 0.73 0.32 -0.34
18 AT2G33990 IQ-domain 9 IQ-domain 9 0.73 0.33 -0.32
19 AT1G21480 Exostosin family protein 0.73 0.31 -0.34
20 AT1G11610 cytochrome P450, family 71, subfamily A, polypeptide 18 cytochrome P450, family 71,
subfamily A, polypeptide 18		 -0.73 0.32 -0.32
21 AT5G15530 biotin carboxyl carrier protein 2 biotin carboxyl carrier protein 2,
CAC1-B		 0.73 0.29 -0.3
22 AT5G50375 cyclopropyl isomerase cyclopropyl isomerase 0.72 0.29 -0.3
23 AT4G20870 fatty acid hydroxylase 2 ARABIDOPSIS FATTY ACID HYDROXYLASE
2, fatty acid hydroxylase 2		 0.72 0.31 -0.33
24 AT1G22330 RNA-binding (RRM/RBD/RNP motifs) family protein 0.72 0.31 -0.33
25 AT3G27870 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.72 0.3 -0.3
26 AT2G46225 ABI-1-like 1 ABI-1-like 1 0.72 0.3 -0.33
27 AT2G23110 Late embryogenesis abundant protein, group 6 -0.72 0.34 -0.34
28 AT2G35880 TPX2 (targeting protein for Xklp2) protein family 0.71 0.32 -0.31
29 AT1G36510 Nucleic acid-binding proteins superfamily -0.71 0.31 -0.3
30 AT4G17460 Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein HAT1 0.71 0.34 -0.31
31 AT2G44740 cyclin p4;1 cyclin p4;1 0.71 0.32 -0.3
32 AT5G16480 Phosphotyrosine protein phosphatases superfamily protein AtPFA-DSP5, plant and fungi
atypical dual-specificity
phosphatase 5		 0.7 0.31 -0.34
33 AT5G13380 Auxin-responsive GH3 family protein -0.7 0.31 -0.32
34 AT5G56280 COP9 signalosome subunit 6A COP9 signalosome subunit 6A 0.7 0.29 -0.33
35 ATCG00080 photosystem II reaction center protein I photosystem II reaction center
protein I		 -0.7 0.32 -0.29
36 AT3G58120 Basic-leucine zipper (bZIP) transcription factor family
protein		 ATBZIP61, BZIP61 0.7 0.31 -0.31
37 AT5G24580 Heavy metal transport/detoxification superfamily protein 0.7 0.3 -0.32
38 AT2G46780 RNA-binding (RRM/RBD/RNP motifs) family protein 0.69 0.3 -0.33
39 AT5G39320 UDP-glucose 6-dehydrogenase family protein 0.69 0.32 -0.31
40 AT3G07274 unknown pseudogene -0.69 0.32 -0.33
41 AT3G08910 DNAJ heat shock family protein 0.69 0.31 -0.34
42 AT5G10430 arabinogalactan protein 4 arabinogalactan protein 4, ATAGP4 0.69 0.31 -0.3
43 AT5G01460 LMBR1-like membrane protein 0.69 0.3 -0.3
44 AT1G08780 ABI3-interacting protein 3 ABI3-interacting protein 3,
PREFOLDIN 4		 0.69 0.32 -0.32
45 AT5G42560 Abscisic acid-responsive (TB2/DP1, HVA22) family protein 0.69 0.31 -0.32
46 AT1G48230 nodulin MtN21 /EamA-like transporter family protein 0.69 0.32 -0.32
47 AT2G21600 endoplasmatic reticulum retrieval protein 1B endoplasmatic reticulum retrieval
protein 1B, endoplasmatic
reticulum retrieval protein 1B		 0.69 0.29 -0.32
48 AT5G15900 TRICHOME BIREFRINGENCE-LIKE 19 TRICHOME BIREFRINGENCE-LIKE 19 0.68 0.31 -0.31
49 AT2G43600 Chitinase family protein 0.68 0.3 -0.33
50 AT4G34215 Domain of unknown function (DUF303) 0.68 0.31 -0.34
51 AT2G45570 cytochrome P450, family 76, subfamily C, polypeptide 2 cytochrome P450, family 76,
subfamily C, polypeptide 2		 -0.68 0.33 -0.32
52 AT2G38320 TRICHOME BIREFRINGENCE-LIKE 34 TRICHOME BIREFRINGENCE-LIKE 34 0.68 0.32 -0.3
53 AT4G38680 glycine rich protein 2 ARABIDOPSIS THALIANA COLD SHOCK
PROTEIN 2, COLD SHOCK DOMAIN
PROTEIN 2, COLD SHOCK PROTEIN 2,
glycine rich protein 2		 0.68 0.31 -0.31
54 AT5G05080 ubiquitin-conjugating enzyme 22 ATUBC22, ubiquitin-conjugating
enzyme 22		 0.68 0.33 -0.33
55 AT5G54530 Protein of unknown function, DUF538 0.68 0.31 -0.34
56 AT5G47770 farnesyl diphosphate synthase 1 farnesyl diphosphate synthase 1 0.68 0.31 -0.32
57 AT1G09230 RNA-binding (RRM/RBD/RNP motifs) family protein -0.68 0.32 -0.32
58 AT5G49800 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.68 0.31 -0.3
59 AT1G22790 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G34010.1); Has 67 Blast
hits to 67 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.68 0.31 -0.32
60 AT3G47080 Tetratricopeptide repeat (TPR)-like superfamily protein -0.68 0.29 -0.32
61 AT3G46030 Histone superfamily protein HTB11 0.68 0.31 -0.31
62 AT5G15600 SPIRAL1-like4 SPIRAL1-like4 0.68 0.32 -0.3
63 AT2G40610 expansin A8 ATEXP8, expansin A8, ATHEXP ALPHA
1.11, EXP8, expansin A8		 0.68 0.31 -0.34
64 AT5G26210 alfin-like 4 alfin-like 4 0.67 0.31 -0.31
65 AT4G30480 Tetratricopeptide repeat (TPR)-like superfamily protein AtTPR1, tetratricopeptide repeat 1 0.67 0.31 -0.29
66 AT1G16030 heat shock protein 70B heat shock protein 70B -0.67 0.31 -0.31
67 AT3G52900 Family of unknown function (DUF662) 0.67 0.32 -0.31
68 AT1G14940 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.67 0.31 -0.3
69 AT1G58250 Golgi-body localisation protein domain ;RNA pol II promoter
Fmp27 protein domain		 SABRE -0.67 0.32 -0.33
70 AT1G61170 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 19 plant
structures; EXPRESSED DURING: 12 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G11125.1); Has 54 Blast hits to 54 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0;
Plants - 34; Viruses - 1; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.67 0.31 -0.29
71 AT3G53650 Histone superfamily protein 0.66 0.32 -0.3
72 AT5G41330 BTB/POZ domain with WD40/YVTN repeat-like protein -0.66 0.31 -0.32
73 AT4G22300 carboxylesterases SUPPRESSOR OF AVRBST-ELICITED
RESISTANCE 1		 0.66 0.3 -0.32
74 AT5G24130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: petal, leaf whorl, flower;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.66 0.32 -0.32
75 AT1G04120 multidrug resistance-associated protein 5 ATP-binding cassette C5,
Arabidopsis thaliana ATP-binding
cassette C5, multidrug
resistance-associated protein 5,
MULTIDRUG RESISTANCE PROTEIN 5,
multidrug resistance-associated
protein 5		 -0.66 0.32 -0.31
76 AT2G19660 Cysteine/Histidine-rich C1 domain family protein 0.66 0.33 -0.32
77 AT2G47320 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.66 0.33 -0.34
78 AT5G47520 RAB GTPase homolog A5A RAB GTPase homolog A5A, RAB GTPase
homolog A5A		 0.66 0.32 -0.32
79 AT4G10310 high-affinity K+ transporter 1 ATHKT1, high-affinity K+
transporter 1		 0.66 0.31 -0.3
80 AT1G20400 Protein of unknown function (DUF1204) 0.66 0.3 -0.3
81 AT4G35335 Nucleotide-sugar transporter family protein 0.66 0.32 -0.31
82 AT1G72830 nuclear factor Y, subunit A3 ATHAP2C, HAP2C, nuclear factor Y,
subunit A3		 -0.66 0.32 -0.32
83 AT4G38000 DNA binding with one finger 4.7 DNA binding with one finger 4.7 -0.66 0.32 -0.31
84 AT2G38905 Low temperature and salt responsive protein family -0.66 0.32 -0.3
85 AT2G29560 cytosolic enolase cytosolic enolase 0.66 0.3 -0.31
86 AT5G59290 UDP-glucuronic acid decarboxylase 3 ATUXS3, UDP-glucuronic acid
decarboxylase 3		 0.66 0.32 -0.32
87 AT1G06760 winged-helix DNA-binding transcription factor family
protein		 0.66 0.32 -0.33
88 AT4G18593 dual specificity protein phosphatase-related 0.65 0.32 -0.33
89 AT5G28630 glycine-rich protein 0.65 0.31 -0.31
90 AT1G63280 Serine protease inhibitor (SERPIN) family protein -0.65 0.32 -0.32
91 AT1G79950 RAD3-like DNA-binding helicase protein -0.65 0.32 -0.32
92 AT3G14850 TRICHOME BIREFRINGENCE-LIKE 41 TRICHOME BIREFRINGENCE-LIKE 41 0.65 0.33 -0.32
93 AT2G25730 unknown protein; Has 157 Blast hits to 144 proteins in 62
species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi -
0; Plants - 35; Viruses - 0; Other Eukaryotes - 21 (source:
NCBI BLink).		 -0.65 0.31 -0.32
94 AT2G04340 unknown protein; Has 24 Blast hits to 24 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.65 0.32 -0.32
95 AT3G12960 unknown protein; Has 44 Blast hits to 44 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.31 -0.31
96 AT1G03457 RNA-binding (RRM/RBD/RNP motifs) family protein 0.65 0.29 -0.34
97 AT5G55310 DNA topoisomerase 1 beta TOPOISOMERASE 1, DNA topoisomerase
1 beta		 -0.65 0.3 -0.3
98 AT5G56790 Protein kinase superfamily protein -0.65 0.3 -0.32
99 AT2G21820 unknown protein; Has 45 Blast hits to 45 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.3 -0.31
100 AT1G01830 ARM repeat superfamily protein -0.64 0.32 -0.29
101 AT5G65240 Leucine-rich repeat protein kinase family protein -0.64 0.32 -0.3
102 AT2G26600 Glycosyl hydrolase superfamily protein -0.64 0.32 -0.32
103 AT5G65710 HAESA-like 2 HAESA-like 2 -0.64 0.29 -0.33
104 AT5G58160 actin binding -0.64 0.31 -0.33
105 AT3G25260 Major facilitator superfamily protein -0.64 0.31 -0.3
106 AT1G21160 eukaryotic translation initiation factor 2 (eIF-2) family
protein		 -0.64 0.31 -0.31
107 AT3G03240 alpha/beta-Hydrolases superfamily protein -0.64 0.33 -0.31
108 AT1G43570 transposable element gene -0.64 0.32 -0.33
109 AT2G29770 Galactose oxidase/kelch repeat superfamily protein -0.64 0.33 -0.32
110 AT2G39710 Eukaryotic aspartyl protease family protein -0.64 0.32 -0.33
111 AT2G35940 BEL1-like homeodomain 1 BEL1-like homeodomain 1, embryo
sac development arrest 29		 -0.63 0.3 -0.31
112 AT1G53790 F-box and associated interaction domains-containing protein -0.63 0.32 -0.31
113 AT5G55240 ARABIDOPSIS THALIANA PEROXYGENASE 2 ARABIDOPSIS THALIANA PEROXYGENASE
2		 -0.62 0.31 -0.33
114 AT5G05220 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.62 0.31 -0.3
115 AT3G59770 sacI homology domain-containing protein / WW
domain-containing protein		 ARABIDOPSIS THALIANA SUPPRESSOR OF
ACTIN 9, SUPPRESSOR OF ACTIN 9		 -0.62 0.3 -0.29
116 ATMG00060 NADH dehydrogenase subunit 5C NADH DEHYDROGENASE SUBUNIT 5, NADH
DEHYDROGENASE SUBUNIT 5.3, NADH
dehydrogenase subunit 5C		 -0.62 0.33 -0.32
117 AT3G24790 Protein kinase superfamily protein -0.62 0.32 -0.33
118 AT1G32810 RING/FYVE/PHD zinc finger superfamily protein -0.62 0.3 -0.32
119 AT5G44150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 13 growth stages; Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.61 0.32 -0.36
120 AT3G12810 SNF2 domain-containing protein / helicase domain-containing
protein		 chr13, PHOTOPERIOD-INDEPENDENT
EARLY FLOWERING 1, SRCAP		 -0.61 0.31 -0.31
121 AT4G33210 F-box family protein SLOW MOTION -0.61 0.32 -0.32
122 AT1G23200 Plant invertase/pectin methylesterase inhibitor superfamily -0.61 0.32 -0.32
123 AT2G29190 pumilio 2 pumilio 2, pumilio 2 -0.61 0.32 -0.32
124 AT4G36460 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.32 -0.3
125 AT5G11730 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.61 0.32 -0.32
126 AT5G42400 SET domain protein 25 ARABIDOPSIS TRITHORAX-RELATED7,
SET domain protein 25		 -0.61 0.29 -0.31
127 AT1G05790 lipase class 3 family protein -0.61 0.32 -0.32
128 AT3G46220 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2042 (InterPro:IPR018611); Has 559
Blast hits to 533 proteins in 154 species: Archae - 3;
Bacteria - 32; Metazoa - 305; Fungi - 42; Plants - 50;
Viruses - 3; Other Eukaryotes - 124 (source: NCBI BLink).		 -0.61 0.32 -0.32
129 AT1G68510 LOB domain-containing protein 42 LOB domain-containing protein 42 -0.61 0.3 -0.32
130 AT2G21490 dehydrin LEA dehydrin LEA -0.61 0.31 -0.31
131 AT4G22770 AT hook motif DNA-binding family protein -0.6 0.33 -0.3
132 AT1G24010 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.6 0.32 -0.33
133 AT5G01450 RING/U-box superfamily protein -0.6 0.34 -0.31
134 AT5G02630 Lung seven transmembrane receptor family protein -0.6 0.33 -0.32
135 AT5G24010 Protein kinase superfamily protein -0.6 0.33 -0.28
136 AT2G25140 casein lytic proteinase B4 CASEIN LYTIC PROTEINASE B-M,
casein lytic proteinase B4, HEAT
SHOCK PROTEIN 98.7		 -0.6 0.31 -0.31
137 AT3G26160 cytochrome P450, family 71, subfamily B, polypeptide 17 cytochrome P450, family 71,
subfamily B, polypeptide 17		 -0.6 0.33 -0.32
138 AT1G36160 acetyl-CoA carboxylase 1 acetyl-CoA carboxylase 1, AT-ACC1,
EMBRYO DEFECTIVE 22, GURKE,
GLOSSYHEAD 1, PASTICCINO 3		 -0.59 0.33 -0.3
139 AT1G24706 THO2 AtTHO2, EMBRYO DEFECTIVE 2793,
THO2		 -0.59 0.34 -0.32
140 AT2G41900 CCCH-type zinc finger protein with ARM repeat domain OXIDATIVE STRESS 2 -0.59 0.31 -0.34
141 AT3G42700 transposable element gene -0.59 0.32 -0.33
142 AT5G07050 nodulin MtN21 /EamA-like transporter family protein -0.59 0.31 -0.33
143 AT3G55320 P-glycoprotein 20 ATP-binding cassette B20,
P-glycoprotein 20		 -0.59 0.32 -0.33
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
144 C0017 sn-Glycero-3-phosphocholine sn-Glycero-3-phosphocholine L-1-Glycero-3-phosphocholine - -0.8 0.45 -0.42 C0017