AT4G14410 : basic Helix-Loop-Helix 104
Query Information
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AGICode AT4G14410
Description basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G14410 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 basic Helix-Loop-Helix 104 1 0.31 -0.32
2 AT2G11140 transposable element gene 0.76 0.32 -0.31
3 AT2G25170 chromatin remodeling factor CHD3 (PICKLE) CHD3, CHR6,
CYTOKININ-HYPERSENSITIVE 2,
GYMNOS, PICKLE, SUPPRESSOR OF SLR
2		 -0.74 0.3 -0.31
4 AT3G26560 ATP-dependent RNA helicase, putative -0.73 0.31 -0.33
5 AT4G20780 calmodulin like 42 calmodulin like 42 0.73 0.32 -0.32
6 AT1G60860 ARF-GAP domain 2 ARF-GAP domain 2 -0.72 0.32 -0.29
7 AT2G43600 Chitinase family protein 0.71 0.31 -0.29
8 AT4G00300 fringe-related protein 0.71 0.31 -0.32
9 AT5G46190 RNA-binding KH domain-containing protein -0.71 0.33 -0.34
10 AT5G57500 Galactosyltransferase family protein 0.71 0.3 -0.32
11 AT1G58100 TCP family transcription factor TCP domain protein 8 0.7 0.31 -0.3
12 AT1G02360 Chitinase family protein 0.69 0.3 -0.31
13 AT5G24740 Protein of unknown function (DUF1162) -0.69 0.32 -0.32
14 AT1G26960 homeobox protein 23 homeobox protein 23, homeobox
protein 23		 0.69 0.33 -0.33
15 AT4G30500 Protein of unknown function (DUF788) 0.69 0.32 -0.31
16 AT2G48060 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: shoot, sperm cell;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341
proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa
- 318; Fungi - 0; Plants - 93; Viruses - 0; Other
Eukaryotes - 105 (source: NCBI BLink).		 -0.68 0.31 -0.31
17 AT4G08460 Protein of unknown function (DUF1644) 0.68 0.32 -0.3
18 AT2G41100 Calcium-binding EF hand family protein ARABIDOPSIS THALIANA CALMODULIN
LIKE 4, TOUCH 3		 0.68 0.3 -0.29
19 AT1G23820 spermidine synthase 1 spermidine synthase 1 0.68 0.3 -0.3
20 AT5G58220 transthyretin-like protein allantoin synthase,
transthyretin-like protein		 0.68 0.31 -0.32
21 AT3G25070 RPM1 interacting protein 4 RPM1 interacting protein 4 0.67 0.35 -0.3
22 AT3G14980 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 -0.67 0.32 -0.3
23 AT5G20840 Phosphoinositide phosphatase family protein -0.67 0.3 -0.3
24 AT4G39560 Galactose oxidase/kelch repeat superfamily protein -0.67 0.32 -0.31
25 AT2G41540 6-phosphogluconate dehydrogenase family protein GPDHC1 -0.67 0.3 -0.33
26 AT5G47040 lon protease 2 lon protease 2 -0.67 0.31 -0.32
27 AT3G63270 CONTAINS InterPro DOMAIN/s: Putative harbinger
transposase-derived nuclease (InterPro:IPR006912); BEST
Arabidopsis thaliana protein match is: PIF / Ping-Pong
family of plant transposases (TAIR:AT3G55350.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.67 0.31 -0.33
28 AT1G25275 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 18 Blast hits to 18 proteins
in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.66 0.31 -0.32
29 AT1G63700 Protein kinase superfamily protein EMBRYO DEFECTIVE 71, MAP KINASE
KINASE KINASE 4, YODA		 -0.66 0.32 -0.33
30 AT1G13910 Leucine-rich repeat (LRR) family protein -0.66 0.31 -0.32
31 AT1G22510 RING/U-box protein with domain of unknown function (DUF
1232)		 0.66 0.3 -0.32
32 AT1G22310 methyl-CPG-binding domain 8 ATMBD8, methyl-CPG-binding domain
8		 -0.66 0.32 -0.31
33 AT2G37430 C2H2 and C2HC zinc fingers superfamily protein 0.66 0.31 -0.3
34 AT3G19960 myosin 1 myosin 1 -0.66 0.32 -0.32
35 AT5G57590 adenosylmethionine-8-amino-7-oxononanoate transaminases biotin auxotroph 1 -0.66 0.3 -0.3
36 AT2G43800 Actin-binding FH2 (formin homology 2) family protein -0.66 0.29 -0.32
37 AT4G29660 embryo defective 2752 EMBRYO DEFECTIVE 2752 0.65 0.34 -0.32
38 AT1G07020 unknown protein; Has 39 Blast hits to 39 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 3;
Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.65 0.3 -0.31
39 AT1G02080 transcription regulators -0.65 0.29 -0.33
40 AT1G31810 Formin Homology 14 Formin Homology 14 -0.65 0.34 -0.32
41 AT1G48090 calcium-dependent lipid-binding family protein -0.65 0.3 -0.32
42 AT5G02260 expansin A9 ATEXP9, expansin A9, ATHEXP ALPHA
1.10, EXP9, expansin A9		 0.64 0.33 -0.32
43 AT5G56260 Ribonuclease E inhibitor RraA/Dimethylmenaquinone
methyltransferase		 0.64 0.3 -0.31
44 AT1G21100 O-methyltransferase family protein indole glucosinolate
O-methyltransferase 1		 0.64 0.32 -0.28
45 AT4G34840 Phosphorylase superfamily protein ARABIDOPSIS METHYLTHIOADENOSINE
NUCLEOSIDASE 2, ARABIDOPSIS
METHYLTHIOADENOSINE NUCLEOSIDASE
2, METHYLTHIOADENOSINE
NUCLEOSIDASE 2,
methylthioadenosine nucleosidase 2		 0.64 0.3 -0.33
46 AT5G24070 Peroxidase superfamily protein 0.64 0.32 -0.32
47 AT4G36030 armadillo repeat only 3 armadillo repeat only 3 0.64 0.31 -0.32
48 AT3G54280 DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA binding;helicases		 ATBTAF1, BTAF1, CHA16, CHR16, ROOT
GROWTH DEFECTIVE 3		 -0.64 0.32 -0.31
49 AT3G29970 B12D protein 0.64 0.33 -0.3
50 AT2G28420 Lactoylglutathione lyase / glyoxalase I family protein glyoxylase I 8 -0.64 0.3 -0.3
51 AT1G22640 myb domain protein 3 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 3, myb domain protein 3		 -0.64 0.32 -0.33
52 AT3G09020 alpha 1,4-glycosyltransferase family protein 0.63 0.33 -0.31
53 AT4G12700 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G04280.1); Has 136 Blast hits
to 136 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other
Eukaryotes - 11 (source: NCBI BLink).		 -0.63 0.3 -0.32
54 AT1G03900 non-intrinsic ABC protein 4 ATP-binding cassette I18,
non-intrinsic ABC protein 4,
non-intrinsic ABC protein 4		 0.63 0.31 -0.31
55 AT5G45610 protein dimerizations SENSITIVE TO UV 2 -0.63 0.31 -0.3
56 AT1G28410 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: myosin heavy chain-related (TAIR:AT4G31340.2);
Has 425 Blast hits to 402 proteins in 77 species: Archae -
4; Bacteria - 22; Metazoa - 249; Fungi - 4; Plants - 98;
Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).		 0.63 0.32 -0.29
57 AT1G02700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G02140.1); Has 49 Blast hits to 49
proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa -
10; Fungi - 6; Plants - 29; Viruses - 0; Other Eukaryotes -
4 (source: NCBI BLink).		 -0.62 0.33 -0.33
58 AT4G27270 Quinone reductase family protein 0.62 0.29 -0.3
59 AT2G25780 Protein of unknown function (DUF1677) 0.62 0.31 -0.31
60 AT4G16160 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 ATOEP16-2, ATOEP16-S -0.62 0.32 -0.3
61 AT3G10810 zinc finger (C3HC4-type RING finger) family protein -0.62 0.3 -0.32
62 AT1G18570 myb domain protein 51 myb domain protein 51, BW51A,
BW51B, HIGH INDOLIC GLUCOSINOLATE
1, myb domain protein 51		 0.62 0.31 -0.3
63 AT1G54870 NAD(P)-binding Rossmann-fold superfamily protein -0.62 0.31 -0.32
64 AT1G80930 MIF4G domain-containing protein / MA3 domain-containing
protein		 -0.62 0.31 -0.31
65 AT2G01820 Leucine-rich repeat protein kinase family protein -0.62 0.32 -0.29
66 AT1G79670 Wall-associated kinase family protein RESISTANCE TO FUSARIUM OXYSPORUM
1, WAKL22		 0.61 0.3 -0.31
67 AT5G06520 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein		 0.61 0.3 -0.3
68 AT5G16520 unknown protein; Has 25 Blast hits to 25 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.32 -0.31
69 AT1G63430 Leucine-rich repeat protein kinase family protein -0.61 0.32 -0.32
70 AT5G26250 Major facilitator superfamily protein 0.61 0.31 -0.33
71 AT5G57220 cytochrome P450, family 81, subfamily F, polypeptide 2 cytochrome P450, family 81,
subfamily F, polypeptide 2		 0.61 0.33 -0.32
72 AT3G57330 autoinhibited Ca2+-ATPase 11 autoinhibited Ca2+-ATPase 11 0.61 0.3 -0.31
73 AT2G20290 myosin-like protein XIG MYOSIN XI G, myosin-like protein
XIG		 -0.6 0.3 -0.3
74 AT1G24706 THO2 AtTHO2, EMBRYO DEFECTIVE 2793,
THO2		 -0.6 0.3 -0.34
75 AT2G29340 NAD-dependent epimerase/dehydratase family protein 0.6 0.34 -0.31
76 AT3G10340 phenylalanine ammonia-lyase 4 phenylalanine ammonia-lyase 4 -0.6 0.3 -0.3
77 AT1G55970 histone acetyltransferase of the CBP family 4 HAC04, histone acetyltransferase
of the CBP family 4, HISTONE
ACETYLTRANSFERASE OF THE CBP
FAMILY 6, HISTONE
ACETYLTRANSFERASE OF THE GNAT/MYST
SUPERFAMILY 04, HISTONE
ACETYLTRANSFERASE OF THE GNAT/MYST
SUPERFAMILY 4		 -0.6 0.33 -0.31
78 AT3G19920 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G64230.1); Has 217 Blast hits
to 217 proteins in 16 species: Archae - 0; Bacteria - 2;
Metazoa - 0; Fungi - 0; Plants - 215; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.33 -0.34
79 AT4G39680 SAP domain-containing protein -0.6 0.32 -0.3
80 AT5G16270 sister chromatid cohesion 1 protein 4 ARABIDOPSIS HOMOLOG OF RAD21 3,
sister chromatid cohesion 1
protein 4		 -0.6 0.31 -0.33
81 AT1G32810 RING/FYVE/PHD zinc finger superfamily protein -0.6 0.31 -0.32
82 AT3G28910 myb domain protein 30 ATMYB30, myb domain protein 30 0.6 0.33 -0.32
83 AT1G79430 Homeodomain-like superfamily protein ALTERED PHLOEM DEVELOPMENT, WOODY 0.6 0.33 -0.31
84 AT1G15020 quiescin-sulfhydryl oxidase 1 quiescin-sulfhydryl oxidase 1,
QSO2, quiescin-sulfhydryl oxidase
1		 0.59 0.32 -0.32
85 AT4G17140 pleckstrin homology (PH) domain-containing protein -0.59 0.33 -0.33
86 AT4G04970 glucan synthase-like 1 GLUCAN SYNTHASE LIKE 1, GLUCAN
SYNTHASE LIKE-1, GSL01, glucan
synthase-like 1		 -0.59 0.32 -0.31
87 AT3G45420 Concanavalin A-like lectin protein kinase family protein -0.59 0.32 -0.32
88 AT1G69430 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G26650.1); Has 216 Blast hits
to 215 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 216; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.33 -0.31
89 AT5G25170 PPPDE putative thiol peptidase family protein 0.59 0.3 -0.32
90 AT3G43740 Leucine-rich repeat (LRR) family protein 0.59 0.31 -0.3
91 AT1G63490 transcription factor jumonji (jmjC) domain-containing
protein		 -0.58 0.34 -0.31
92 ATCG00770 ribosomal protein S8 ribosomal protein S8 -0.58 0.31 -0.31
93 AT2G25660 embryo defective 2410 embryo defective 2410 -0.58 0.36 -0.33
94 AT1G20960 U5 small nuclear ribonucleoprotein helicase, putative embryo defective 1507 -0.58 0.33 -0.31
95 AT1G08600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATRX, CHR20 -0.58 0.31 -0.31
96 AT5G07920 diacylglycerol kinase1 DIACYLGLYCEROL KINASE 1,
diacylglycerol kinase1		 -0.58 0.3 -0.33
97 AT4G35780 ACT-like protein tyrosine kinase family protein serine/threonine/tyrosine kinase
17		 -0.57 0.31 -0.33
98 AT1G67140 HEAT repeat-containing protein SWEETIE -0.57 0.31 -0.32
99 AT4G03205 Coproporphyrinogen III oxidase hemf2 -0.57 0.3 -0.32
100 AT2G20460 transposable element gene -0.57 0.32 -0.32
101 AT1G15940 Tudor/PWWP/MBT superfamily protein -0.57 0.32 -0.32
102 AT1G10320 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.57 0.32 -0.33
103 AT2G20170 Protein of Unknown Function (DUF239) -0.57 0.32 -0.29
104 AT1G03060 Beige/BEACH domain ;WD domain, G-beta repeat protein SPIRRIG -0.57 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
105 C0267 Zeatin cis-Zeatin cis-Zeatin cytokinins-O-glucoside biosynthesis,
cytokinins degradation,
cytokinins 7-N-glucoside biosynthesis,
cytokinins 9-N-glucoside biosynthesis,
cis-zeatin biosynthesis 		-0.64 0.45 -0.47 C0267