AT4G15475 : -
Query Information
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AGICode AT4G15475
Description F-box/RNI-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G15475 F-box/RNI-like superfamily protein 1 0.32 -0.29
2 AT4G30800 Nucleic acid-binding, OB-fold-like protein -0.84 0.31 -0.31
3 AT3G27280 prohibitin 4 prohibitin 4, prohibitin 4 -0.81 0.32 -0.3
4 AT2G19670 protein arginine methyltransferase 1A ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 1A,
protein arginine methyltransferase
1A		 -0.8 0.32 -0.3
5 AT4G10450 Ribosomal protein L6 family -0.79 0.32 -0.33
6 AT3G13160 Tetratricopeptide repeat (TPR)-like superfamily protein -0.78 0.32 -0.33
7 AT2G20490 nucleolar RNA-binding Nop10p family protein EMBRYO SAC DEVELOPMENT ARREST 27,
NOP10		 -0.78 0.33 -0.31
8 AT5G22650 histone deacetylase 2B ARABIDOPSIS HISTONE DEACETYLASE 2,
ATHD2B, HISTONE DEACETYLASE 2,
histone deacetylase 2B, HDA4,
HDT02, HDT2		 -0.77 0.3 -0.31
9 AT2G39795 Mitochondrial glycoprotein family protein -0.76 0.3 -0.32
10 AT4G34555 Ribosomal protein S25 family protein -0.76 0.31 -0.3
11 AT1G31817 Ribosomal L18p/L5e family protein NUCLEAR FUSION DEFECTIVE 3 -0.76 0.31 -0.32
12 AT4G25630 fibrillarin 2 ATFIB2, fibrillarin 2 -0.76 0.33 -0.32
13 AT1G23410 Ribosomal protein S27a / Ubiquitin family protein -0.75 0.31 -0.31
14 AT5G08180 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.75 0.3 -0.32
15 AT3G23830 glycine-rich RNA-binding protein 4 AtGRP4, GR-RBP4, glycine-rich
RNA-binding protein 4		 -0.75 0.33 -0.29
16 AT1G54690 gamma histone variant H2AX GAMMA H2AX, gamma histone variant
H2AX, H2AXB, histone H2A 3		 -0.75 0.34 -0.32
17 AT1G32740 SBP (S-ribonuclease binding protein) family protein 0.74 0.31 -0.33
18 AT1G63220 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.74 0.31 -0.29
19 AT3G05060 NOP56-like pre RNA processing ribonucleoprotein -0.74 0.31 -0.33
20 AT1G14980 chaperonin 10 chaperonin 10 -0.74 0.32 -0.3
21 AT1G72730 DEA(D/H)-box RNA helicase family protein -0.74 0.3 -0.32
22 AT2G27840 histone deacetylase-related / HD-related HISTONE DEACETYLASE 13, HDT04,
HDT4		 -0.73 0.31 -0.3
23 AT3G22300 ribosomal protein S10 ribosomal protein S10 -0.73 0.3 -0.31
24 AT5G59240 Ribosomal protein S8e family protein -0.73 0.34 -0.3
25 AT3G49080 Ribosomal protein S5 domain 2-like superfamily protein -0.72 0.32 -0.33
26 AT2G14080 Disease resistance protein (TIR-NBS-LRR class) family 0.72 0.31 -0.32
27 AT2G30050 transducin family protein / WD-40 repeat family protein -0.72 0.31 -0.32
28 AT4G26780 Co-chaperone GrpE family protein AR192, mitochondrial GrpE 2 -0.72 0.3 -0.33
29 AT1G24070 cellulose synthase-like A10 cellulose synthase-like A10,
CELLULOSE SYNTHASE LIKE A10,
cellulose synthase-like A10		 0.72 0.32 -0.31
30 AT2G25210 Ribosomal protein L39 family protein -0.72 0.31 -0.3
31 AT1G64220 translocase of outer membrane 7 kDa subunit 2 translocase of outer membrane 7
kDa subunit 2		 -0.72 0.34 -0.32
32 AT1G28395 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast
hits to 89 proteins in 11 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.71 0.31 -0.32
33 AT5G11630 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G17310.1); Has 90 Blast
hits to 90 proteins in 10 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.71 0.32 -0.32
34 AT2G39390 Ribosomal L29 family protein -0.71 0.31 -0.31
35 AT2G29540 RNApolymerase 14 kDa subunit ATRPAC14, RNApolymerase 14 kDa
subunit, RNApolymerase 14 kDa
subunit		 -0.71 0.3 -0.31
36 AT1G49410 translocase of the outer mitochondrial membrane 6 translocase of the outer
mitochondrial membrane 6		 -0.71 0.34 -0.32
37 AT3G03060 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.71 0.32 -0.32
38 AT1G04070 translocase of outer membrane 22-I ATTOM22-I, translocase of outer
membrane 22-I		 -0.71 0.31 -0.3
39 AT2G47610 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein -0.71 0.32 -0.3
40 AT1G56110 homolog of nucleolar protein NOP56 homolog of nucleolar protein NOP56 -0.7 0.32 -0.31
41 AT1G48840 Plant protein of unknown function (DUF639) 0.7 0.31 -0.31
42 AT1G11545 xyloglucan endotransglucosylase/hydrolase 8 xyloglucan
endotransglucosylase/hydrolase 8		 -0.7 0.31 -0.33
43 AT3G18200 nodulin MtN21 /EamA-like transporter family protein -0.7 0.31 -0.34
44 AT5G23300 pyrimidine d pyrimidine d -0.7 0.32 -0.33
45 AT5G62440 Protein of unknown function (DUF3223) -0.7 0.3 -0.34
46 AT1G23100 GroES-like family protein -0.69 0.32 -0.32
47 AT5G64650 Ribosomal protein L17 family protein -0.69 0.28 -0.3
48 AT3G02850 STELAR K+ outward rectifier STELAR K+ outward rectifier -0.69 0.31 -0.3
49 AT2G31410 unknown protein; Has 1719 Blast hits to 1091 proteins in
184 species: Archae - 5; Bacteria - 24; Metazoa - 559;
Fungi - 169; Plants - 192; Viruses - 1; Other Eukaryotes -
769 (source: NCBI BLink).		 -0.69 0.32 -0.31
50 AT1G15740 Leucine-rich repeat family protein 0.69 0.3 -0.32
51 AT4G01560 Ribosomal RNA processing Brix domain protein maternal effect embryo arrest 49 -0.69 0.31 -0.33
52 AT1G20220 Alba DNA/RNA-binding protein -0.69 0.31 -0.31
53 AT2G33210 heat shock protein 60-2 heat shock protein 60-2 -0.69 0.31 -0.31
54 AT4G39300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.69 0.3 -0.3
55 AT3G61710 AUTOPHAGY 6 ATATG6, AtBECLIN1, AUTOPHAGY 6,
BECLIN1		 0.69 0.31 -0.3
56 AT5G02050 Mitochondrial glycoprotein family protein -0.69 0.3 -0.34
57 AT5G50810 translocase inner membrane subunit 8 translocase inner membrane subunit
8		 -0.69 0.3 -0.31
58 AT5G48870 Small nuclear ribonucleoprotein family protein SUPERSENSITIVE TO ABA AND DROUGHT
1		 -0.69 0.3 -0.32
59 AT1G72650 TRF-like 6 TRF-like 6 0.69 0.31 -0.31
60 AT3G59650 mitochondrial ribosomal protein L51/S25/CI-B8 family
protein		 -0.69 0.31 -0.33
61 AT3G03920 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein -0.69 0.33 -0.32
62 AT2G17630 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 -0.69 0.31 -0.3
63 AT1G29400 MEI2-like protein 5 MEI2-like protein 5, MEI2-like
protein 5		 0.68 0.32 -0.32
64 AT4G31790 Tetrapyrrole (Corrin/Porphyrin) Methylases -0.68 0.32 -0.31
65 AT5G56500 TCP-1/cpn60 chaperonin family protein chaperonin-60beta3 -0.68 0.32 -0.32
66 AT1G23200 Plant invertase/pectin methylesterase inhibitor superfamily 0.68 0.3 -0.32
67 AT3G63000 NPL4-like protein 1 NPL4-like protein 1 0.68 0.29 -0.33
68 AT3G10090 Nucleic acid-binding, OB-fold-like protein -0.68 0.34 -0.3
69 AT3G50350 Protein of unknown function (DUF1685) -0.68 0.3 -0.34
70 AT1G26740 Ribosomal L32p protein family -0.68 0.31 -0.3
71 AT5G67630 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.68 0.34 -0.31
72 AT3G51800 metallopeptidase M24 family protein A. THALIANA ERBB-3 BINDING PROTEIN
1, ATG2, ERBB-3 BINDING PROTEIN 1		 -0.68 0.32 -0.31
73 AT4G36420 Ribosomal protein L12 family protein -0.67 0.3 -0.33
74 AT4G30220 small nuclear ribonucleoprotein F small nuclear ribonucleoprotein F -0.67 0.29 -0.32
75 AT5G61030 glycine-rich RNA-binding protein 3 glycine-rich RNA-binding protein 3 -0.67 0.32 -0.3
76 AT1G02360 Chitinase family protein -0.67 0.33 -0.31
77 AT1G01240 unknown protein; INVOLVED IN: N-terminal protein
myristoylation; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 11 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G46550.1); Has 95 Blast hits to 78 proteins in 16
species: Archae - 0; Bacteria - 2; Metazoa - 11; Fungi - 0;
Plants - 80; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.67 0.32 -0.33
78 AT5G54020 Cysteine/Histidine-rich C1 domain family protein -0.67 0.31 -0.33
79 AT4G30930 Ribosomal protein L21 NUCLEAR FUSION DEFECTIVE 1 -0.67 0.33 -0.32
80 AT5G03300 adenosine kinase 2 adenosine kinase 2 -0.67 0.3 -0.32
81 AT5G57360 Galactose oxidase/kelch repeat superfamily protein ADAGIO 1, FKF1-LIKE PROTEIN 2, LOV
KELCH PROTEIN 1, ZEITLUPE		 0.67 0.31 -0.31
82 AT1G22270 Trm112p-like protein -0.67 0.35 -0.34
83 AT3G12860 NOP56-like pre RNA processing ribonucleoprotein -0.67 0.3 -0.33
84 AT1G52930 Ribosomal RNA processing Brix domain protein -0.66 0.29 -0.29
85 AT3G49100 Signal recognition particle, SRP9/SRP14 subunit -0.66 0.31 -0.31
86 AT2G20940 Protein of unknown function (DUF1279) -0.66 0.35 -0.31
87 AT4G16265 RNA polymerases M/15 Kd subunit NRPB9B, NRPD9B, NRPE9B -0.66 0.31 -0.33
88 AT5G50920 CLPC homologue 1 ATHSP93-V, CLPC, CLPC homologue 1,
DE-REGULATED CAO ACCUMULATION 1,
HEAT SHOCK PROTEIN 93-V		 0.66 0.3 -0.32
89 AT4G29890 choline monooxygenase, putative (CMO-like) 0.66 0.31 -0.32
90 AT3G04230 Ribosomal protein S5 domain 2-like superfamily protein -0.66 0.31 -0.3
91 AT5G45160 Root hair defective 3 GTP-binding protein (RHD3) 0.66 0.29 -0.33
92 AT1G08580 unknown protein; Has 39 Blast hits to 39 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 35; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.66 0.31 -0.31
93 AT4G13850 glycine-rich RNA-binding protein 2 GLYCINE-RICH RNA-BINDING PROTEIN
2, glycine-rich RNA-binding
protein 2, glycine rich protein 2		 -0.66 0.32 -0.32
94 AT5G26570 catalytics;carbohydrate kinases;phosphoglucan, water
dikinases		 ATGWD3, OK1, PHOSPHOGLUCAN WATER
DIKINASE		 0.66 0.31 -0.31
95 AT4G27590 Heavy metal transport/detoxification superfamily protein -0.66 0.32 -0.32
96 AT5G60730 Anion-transporting ATPase -0.66 0.32 -0.3
97 AT2G28420 Lactoylglutathione lyase / glyoxalase I family protein glyoxylase I 8 0.65 0.3 -0.31
98 AT5G02670 BEST Arabidopsis thaliana protein match is: poly(A)
polymerase 3 (TAIR:AT3G06560.1); Has 14 Blast hits to 8
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.64 0.31 -0.34
99 AT5G10940 transducin family protein / WD-40 repeat family protein ALTERED SEED GERMINATION 2 0.64 0.31 -0.31
100 AT3G08840 D-alanine--D-alanine ligase family 0.63 0.32 -0.31
101 AT1G17145 RING/U-box superfamily protein 0.63 0.31 -0.3
102 AT3G08850 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1B, RAPTOR1, RAPTOR1B 0.63 0.32 -0.32
103 AT3G13340 Transducin/WD40 repeat-like superfamily protein 0.63 0.3 -0.32
104 AT5G57350 H(+)-ATPase 3 H(+)-ATPase 3, ARABIDOPSIS
THALIANA ARABIDOPSIS H(+)-ATPASE,
H(+)-ATPase 3		 0.63 0.31 -0.32
105 AT1G02020 nitroreductase family protein 0.62 0.3 -0.32
106 AT3G03620 MATE efflux family protein 0.62 0.31 -0.32
107 AT5G13690 alpha-N-acetylglucosaminidase family / NAGLU family CYCLOPS 1,
N-ACETYL-GLUCOSAMINIDASE		 0.62 0.32 -0.3
108 AT3G57300 INO80 ortholog INO80 ORTHOLOG, INO80 ortholog 0.62 0.32 -0.32
109 AT4G00550 digalactosyl diacylglycerol deficient 2 digalactosyl diacylglycerol
deficient 2		 0.62 0.33 -0.33
110 AT2G46550 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G01240.3); Has 72 Blast hits
to 68 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.29 -0.31
111 AT5G66320 GATA transcription factor 5 GATA transcription factor 5 0.62 0.34 -0.33
112 AT4G33210 F-box family protein SLOW MOTION 0.61 0.32 -0.31
113 AT2G28490 RmlC-like cupins superfamily protein 0.61 0.32 -0.31
114 AT3G08020 PHD finger family protein 0.6 0.33 -0.3
115 AT2G48110 reduced epidermal fluorescence 4 MED33B, REDUCED EPIDERMAL
FLUORESCENCE 4		 0.6 0.32 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
116 C0217 Putative glucosinole - - - -0.81 0.44 -0.42
117 C0003 α-Tocopherol - alpha-Tocopherol vitamin E biosynthesis 0.7 0.45 -0.43 C0003