AT4G17090 : BETA-AMYLASE 3
Query Information
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AGICode AT4G17090
Description chloroplast beta-amylase
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G17090 chloroplast beta-amylase BETA-AMYLASE 3, BETA-AMYLASE 8,
chloroplast beta-amylase		 1 0.3 -0.31
2 AT1G78290 Protein kinase superfamily protein SNF1-RELATED PROTEIN KINASE 2-8,
SNF1-RELATED PROTEIN KINASE 2.8,
SNF1-RELATED PROTEIN KINASE 2C		 0.84 0.31 -0.29
3 AT2G28900 outer plastid envelope protein 16-1 outer plastid envelope protein
16-1, OUTER PLASTID ENVELOPE
PROTEIN 16-L, outer envelope
protein 16, outer plastid envelope
protein 16-1		 0.8 0.31 -0.33
4 AT4G35310 calmodulin-domain protein kinase 5 ATCPK5, calmodulin-domain protein
kinase 5		 0.79 0.31 -0.33
5 AT5G62930 SGNH hydrolase-type esterase superfamily protein -0.75 0.33 -0.32
6 AT3G05660 receptor like protein 33 receptor like protein 33, receptor
like protein 33		 0.74 0.31 -0.33
7 AT4G15130 phosphorylcholine cytidylyltransferase2 ATCCT2, phosphorylcholine
cytidylyltransferase2		 0.74 0.36 -0.3
8 AT5G55760 sirtuin 1 sirtuin 1 0.73 0.32 -0.32
9 AT3G62010 unknown protein; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; Has 553 Blast hits to 216 proteins in 93
species: Archae - 0; Bacteria - 124; Metazoa - 193; Fungi -
58; Plants - 108; Viruses - 0; Other Eukaryotes - 70
(source: NCBI BLink).		 -0.73 0.32 -0.31
10 AT3G17510 CBL-interacting protein kinase 1 CBL-interacting protein kinase 1,
SNF1-RELATED PROTEIN KINASE 3.16		 -0.72 0.32 -0.3
11 AT5G04280 RNA-binding (RRM/RBD/RNP motifs) family protein with
retrovirus zinc finger-like domain		 AtRZ-1c, RZ-1c 0.72 0.32 -0.33
12 AT2G04940 scramblase-related -0.72 0.31 -0.33
13 AT3G17130 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.71 0.31 -0.33
14 AT4G23280 cysteine-rich RLK (RECEPTOR-like protein kinase) 20 cysteine-rich RLK (RECEPTOR-like
protein kinase) 20		 0.71 0.32 -0.32
15 AT5G62580 ARM repeat superfamily protein -0.71 0.32 -0.32
16 AT5G02490 Heat shock protein 70 (Hsp 70) family protein AtHsp70-2, Hsp70-2 0.71 0.32 -0.31
17 AT1G71710 DNAse I-like superfamily protein 0.71 0.33 -0.32
18 AT3G44450 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G52740.1); Has 63 Blast hits
to 63 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.71 0.31 -0.31
19 AT3G55760 unknown protein; LOCATED IN: chloroplast stroma,
chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED
DURING: 10 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G42430.2); Has 176 Blast
hits to 125 proteins in 40 species: Archae - 0; Bacteria -
3; Metazoa - 19; Fungi - 9; Plants - 81; Viruses - 0; Other
Eukaryotes - 64 (source: NCBI BLink).		 0.7 0.33 -0.32
20 AT1G19860 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.7 0.35 -0.33
21 AT1G08680 ARF GAP-like zinc finger-containing protein ZIGA4 ARF-GAP domain 14, ARF GAP-like
zinc finger-containing protein
ZIGA4		 -0.7 0.32 -0.32
22 AT5G56020 Got1/Sft2-like vescicle transport protein family -0.7 0.32 -0.35
23 AT1G06710 Tetratricopeptide repeat (TPR)-like superfamily protein 0.69 0.31 -0.32
24 AT5G38890 Nucleic acid-binding, OB-fold-like protein 0.69 0.31 -0.3
25 AT4G27450 Aluminium induced protein with YGL and LRDR motifs -0.69 0.32 -0.31
26 AT5G64600 O-fucosyltransferase family protein 0.69 0.31 -0.31
27 AT4G08220 transposable element gene -0.68 0.31 -0.32
28 AT2G44490 Glycosyl hydrolase superfamily protein BETA GLUCOSIDASE 26, PENETRATION 2 0.68 0.33 -0.31
29 AT1G10370 Glutathione S-transferase family protein GLUTATHIONE S-TRANSFERASE TAU 17,
EARLY-RESPONSIVE TO DEHYDRATION 9,
GLUTATHIONE S-TRANSFERASE 30,
GLUTATHIONE S-TRANSFERASE 30B,
GLUTATHIONE S-TRANSFERASE U17		 0.68 0.3 -0.33
30 AT5G07860 HXXXD-type acyl-transferase family protein -0.67 0.3 -0.33
31 AT5G19120 Eukaryotic aspartyl protease family protein -0.67 0.3 -0.32
32 AT5G63110 histone deacetylase 6 HISTONE DEACETYLASE 6, AXE1,
histone deacetylase 6, RPD3B,
RNA-MEDIATED TRANSCRIPTIONAL
SILENCING 1, SIL1		 0.67 0.31 -0.33
33 AT2G43620 Chitinase family protein 0.67 0.32 -0.31
34 AT1G17130 Family of unknown function (DUF572) 0.67 0.32 -0.31
35 AT1G80190 partner of SLD five 1 partner of SLD five 1 0.67 0.34 -0.32
36 AT3G03770 Leucine-rich repeat protein kinase family protein 0.67 0.31 -0.33
37 AT1G07280 Tetratricopeptide repeat (TPR)-like superfamily protein 0.66 0.34 -0.31
38 AT1G73350 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; Has 46 Blast hits to 46 proteins
in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi
- 3; Plants - 36; Viruses - 0; Other Eukaryotes - 4
(source: NCBI BLink).		 0.66 0.31 -0.31
39 AT4G38960 B-box type zinc finger family protein 0.66 0.31 -0.32
40 AT4G30650 Low temperature and salt responsive protein family 0.66 0.32 -0.33
41 AT5G02220 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.66 0.32 -0.33
42 AT5G01410 Aldolase-type TIM barrel family protein ATPDX1, ARABIDOPSIS THALIANA
PYRIDOXINE BIOSYNTHESIS 1.3, PDX1,
PYRIDOXINE BIOSYNTHESIS 1.3,
REDUCED SUGAR RESPONSE 4		 0.66 0.3 -0.32
43 AT3G12280 retinoblastoma-related 1 RETINOBLASTOMA-RELATED PROTEIN 1,
RB, RETINOBLASTOMA 1,
RETINOBLASTOMA-RELATED,
retinoblastoma-related 1		 0.66 0.32 -0.31
44 AT3G15470 Transducin/WD40 repeat-like superfamily protein 0.66 0.31 -0.32
45 AT5G11090 serine-rich protein-related -0.66 0.31 -0.31
46 AT2G37710 receptor lectin kinase receptor lectin kinase 0.66 0.3 -0.31
47 AT3G14890 phosphoesterase 0.65 0.32 -0.28
48 AT1G75220 Major facilitator superfamily protein AtERDL6, ERD6-like 6 -0.65 0.31 -0.33
49 AT4G23570 phosphatase-related SGT1A 0.65 0.32 -0.3
50 AT3G19650 cyclin-related 0.65 0.33 -0.3
51 AT2G19190 FLG22-induced receptor-like kinase 1 FLG22-induced receptor-like kinase
1		 0.65 0.3 -0.32
52 AT1G18660 zinc finger (C3HC4-type RING finger) family protein 0.65 0.31 -0.31
53 AT4G37210 Tetratricopeptide repeat (TPR)-like superfamily protein 0.65 0.3 -0.29
54 AT2G23340 DREB and EAR motif protein 3 DREB and EAR motif protein 3 0.65 0.32 -0.31
55 AT2G29020 Rab5-interacting family protein -0.65 0.31 -0.31
56 AT1G13020 eukaryotic initiation factor 4B2 eukaryotic initiation factor 4B2 0.64 0.32 -0.32
57 AT3G48810 Pentatricopeptide repeat (PPR) superfamily protein 0.63 0.29 -0.32
58 AT4G28610 phosphate starvation response 1 AtPHR1, phosphate starvation
response 1		 0.63 0.31 -0.32
59 AT4G15093 catalytic LigB subunit of aromatic ring-opening dioxygenase
family		 -0.63 0.31 -0.31
60 AT5G19860 Protein of unknown function, DUF538 -0.63 0.31 -0.31
61 AT1G28580 GDSL-like Lipase/Acylhydrolase superfamily protein -0.63 0.35 -0.32
62 AT1G70290 trehalose-6-phosphatase synthase S8 ATTPS8, ATTPSC,
trehalose-6-phosphatase synthase
S8		 -0.63 0.34 -0.32
63 AT3G01360 Family of unknown function (DUF716) -0.62 0.32 -0.3
64 AT1G15890 Disease resistance protein (CC-NBS-LRR class) family 0.62 0.31 -0.32
65 AT1G33055 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: anaerobic respiration; LOCATED IN:
endomembrane system; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 6 growth stages; Has 20 Blast hits to 20
proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.62 0.33 -0.32
66 AT3G50950 HOPZ-ACTIVATED RESISTANCE 1 HOPZ-ACTIVATED RESISTANCE 1 0.62 0.31 -0.31
67 AT2G45170 AUTOPHAGY 8E AUTOPHAGY 8E, AUTOPHAGY 8E -0.62 0.31 -0.3
68 AT1G11360 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.62 0.34 -0.3
69 AT4G13510 ammonium transporter 1;1 ammonium transporter 1;1,
ARABIDOPSIS THALIANA AMMONIUM
TRANSPORT 1, ATAMT1;1		 0.62 0.32 -0.34
70 AT1G51700 DOF zinc finger protein 1 DOF zinc finger protein 1, DOF
zinc finger protein 1		 0.62 0.3 -0.32
71 AT1G61820 beta glucosidase 46 beta glucosidase 46 -0.61 0.33 -0.33
72 AT3G27670 ARM repeat superfamily protein RESURRECTION1 -0.61 0.32 -0.32
73 AT5G03970 F-box associated ubiquitination effector family protein 0.61 0.31 -0.31
74 AT3G52480 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 10 plant structures;
EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis,
petal differentiation and expansion stage; Has 28 Blast
hits to 28 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.31 -0.32
75 AT1G09680 Pentatricopeptide repeat (PPR) superfamily protein 0.61 0.31 -0.34
76 AT4G24240 WRKY DNA-binding protein 7 ATWRKY7, WRKY DNA-binding protein
7		 0.61 0.33 -0.33
77 AT4G10270 Wound-responsive family protein -0.61 0.32 -0.32
78 AT5G15850 CONSTANS-like 1 ATCOL1, CONSTANS-like 1 0.61 0.31 -0.31
79 AT1G30200 F-box family protein -0.61 0.33 -0.31
80 AT3G10040 sequence-specific DNA binding transcription factors -0.61 0.33 -0.32
81 AT3G46970 alpha-glucan phosphorylase 2 Arabidopsis thaliana alpha-glucan
phosphorylase 2, alpha-glucan
phosphorylase 2		 0.61 0.31 -0.32
82 AT5G19240 Glycoprotein membrane precursor GPI-anchored 0.61 0.31 -0.31
83 AT5G15120 Protein of unknown function (DUF1637) -0.6 0.31 -0.33
84 AT3G55450 PBS1-like 1 PBS1-like 1 0.6 0.31 -0.32
85 AT1G71040 Cupredoxin superfamily protein Low Phosphate Root2 0.6 0.31 -0.31
86 AT1G28760 Uncharacterized conserved protein (DUF2215) -0.6 0.32 -0.31
87 AT3G27220 Galactose oxidase/kelch repeat superfamily protein -0.6 0.3 -0.3
88 AT2G37590 DNA binding with one finger 2.4 ATDOF2.4, DNA binding with one
finger 2.4		 -0.6 0.32 -0.33
89 AT1G13330 Arabidopsis Hop2 homolog Arabidopsis Hop2 homolog 0.6 0.33 -0.32
90 AT3G09000 proline-rich family protein -0.6 0.34 -0.3
91 AT5G39890 Protein of unknown function (DUF1637) -0.6 0.32 -0.29
92 AT3G22060 Receptor-like protein kinase-related family protein 0.6 0.32 -0.31
93 AT1G44810 DNA-binding storekeeper protein-related transcriptional
regulator		 -0.6 0.31 -0.31
94 AT5G59950 RNA-binding (RRM/RBD/RNP motifs) family protein 0.6 0.31 -0.32
95 AT1G08960 cation exchanger 11 CATION EXCHANGER 11, Arabidopsis
thaliana cation calcium exchanger
5, cation exchanger 11, cation
calcium exchanger 5		 0.59 0.3 -0.3
96 AT1G51920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: stem, stamen; EXPRESSED
DURING: 4 anthesis; Has 22 Blast hits to 22 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.59 0.31 -0.32
97 AT2G38870 Serine protease inhibitor, potato inhibitor I-type family
protein		 0.59 0.31 -0.32
98 AT5G43440 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.59 0.33 -0.31
99 AT1G66080 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF775 (InterPro:IPR008493); Has 285 Blast
hits to 283 proteins in 133 species: Archae - 0; Bacteria -
0; Metazoa - 120; Fungi - 88; Plants - 50; Viruses - 0;
Other Eukaryotes - 27 (source: NCBI BLink).		 0.59 0.31 -0.31
100 AT3G22220 hAT transposon superfamily -0.58 0.33 -0.32
101 AT1G03280 Transcription factor TFIIE, alpha subunit -0.58 0.31 -0.31
102 AT1G32120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: membrane; EXPRESSED
IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C
globular stage, F mature embryo stage, petal
differentiation and expansion stage, E expanded cotyledon
stage; CONTAINS InterPro DOMAIN/s: Aminotransferase-like,
plant mobile domain (InterPro:IPR019557), Protein of
unknown function DUF716 (InterPro:IPR006904); BEST
Arabidopsis thaliana protein match is:
Aminotransferase-like, plant mobile domain family protein
(TAIR:AT1G51538.1); Has 16736 Blast hits to 9656 proteins
in 576 species: Archae - 4; Bacteria - 1182; Metazoa -
7098; Fungi - 2631; Plants - 1178; Viruses - 174; Other
Eukaryotes - 4469 (source: NCBI BLink).		 -0.58 0.32 -0.31
103 AT3G26330 cytochrome P450, family 71, subfamily B, polypeptide 37 cytochrome P450, family 71,
subfamily B, polypeptide 37		 -0.58 0.32 -0.31
104 AT3G50880 DNA glycosylase superfamily protein -0.57 0.3 -0.34
105 AT2G47310 flowering time control protein-related / FCA gamma-related -0.57 0.33 -0.31
106 AT5G25900 GA requiring 3 ARABIDOPSIS THALIANA ENT-KAURENE
OXIDASE 1, CYTOCHROME P450 701 A3,
GA requiring 3		 -0.57 0.31 -0.33
107 AT1G24340 FAD/NAD(P)-binding oxidoreductase family protein EMBRYO DEFECTIVE 2421, EMBRYO
DEFECTIVE 260		 -0.57 0.32 -0.31
108 AT2G38440 SCAR homolog 2 SCAR HOMOLOG 2, DIS3, IRREGULAR
TRICHOME BRANCH1, SCAR homolog 2,
WAVE4		 -0.57 0.3 -0.31
109 AT1G17980 poly(A) polymerase 1 poly(A) polymerase 1 -0.57 0.33 -0.31
110 AT5G65490 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: SGT1
(InterPro:IPR010770); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 -0.57 0.33 -0.32
111 AT1G32330 heat shock transcription factor A1D heat shock transcription factor
A1D, heat shock transcription
factor A1D		 -0.57 0.32 -0.31
112 AT5G15240 Transmembrane amino acid transporter family protein -0.56 0.31 -0.3
113 AT5G01940 eukaryotic translation initiation factor 2B family protein
/ eIF-2B family protein		 -0.56 0.32 -0.31
114 AT1G09010 glycoside hydrolase family 2 protein -0.56 0.3 -0.32
115 AT4G01450 nodulin MtN21 /EamA-like transporter family protein -0.56 0.32 -0.33
116 AT2G03450 purple acid phosphatase 9 PURPLE ACID PHOSPHATASE 9, purple
acid phosphatase 9		 -0.56 0.3 -0.32
117 AT3G09470 Major facilitator superfamily protein -0.55 0.28 -0.32