AT4G13940 : S-ADENOSYL-L-HOMOCYSTEIN HYDROLASE 1
Query Information
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AGICode AT4G13940
Description S-adenosyl-L-homocysteine hydrolase
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G13940 S-adenosyl-L-homocysteine hydrolase S-ADENOSYL-L-HOMOCYSTEIN HYDROLASE
1, EMBRYO DEFECTIVE 1395,
HOMOLOGY-DEPENDENT GENE SILENCING
1, MATERNAL EFFECT EMBRYO ARREST
58, S-ADENOSYL-L-HOMOCYSTEIN
HYDROLASE 1		 1 0.29 -0.32
2 AT5G57280 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 root initiation defective 2 0.84 0.3 -0.31
3 AT2G17670 Tetratricopeptide repeat (TPR)-like superfamily protein 0.84 0.32 -0.33
4 AT5G03740 histone deacetylase 2C histone deacetylase 2C, HISTONE
DEACETYLASE 3		 0.83 0.33 -0.33
5 AT5G61770 PETER PAN-like protein PETER PAN-like protein 0.82 0.36 -0.31
6 AT5G02500 heat shock cognate protein 70-1 ARABIDOPSIS THALIANA HEAT SHOCK
COGNATE PROTEIN 70-1, AtHsp70-1,
HEAT SHOCK COGNATE PROTEIN 70,
heat shock cognate protein 70-1,
HEAT SHOCK PROTEIN 70-1		 0.81 0.31 -0.31
7 AT3G04130 Tetratricopeptide repeat (TPR)-like superfamily protein 0.81 0.3 -0.31
8 AT5G57870 MIF4G domain-containing protein / MA3 domain-containing
protein		 eukaryotic translation Initiation
Factor isoform 4G1		 0.8 0.31 -0.32
9 AT2G34570 PIN domain-like family protein maternal effect embryo arrest 21 0.8 0.31 -0.31
10 AT5G35530 Ribosomal protein S3 family protein 0.8 0.32 -0.33
11 AT3G11710 lysyl-tRNA synthetase 1 lysyl-tRNA synthetase 1 0.79 0.3 -0.32
12 AT1G10590 Nucleic acid-binding, OB-fold-like protein 0.79 0.33 -0.29
13 AT3G18165 modifier of snc1,4 Modifier of snc1,4 0.79 0.32 -0.3
14 AT3G24830 Ribosomal protein L13 family protein 0.79 0.31 -0.31
15 AT5G44320 Eukaryotic translation initiation factor 3 subunit 7
(eIF-3)		 0.79 0.32 -0.34
16 AT4G02230 Ribosomal protein L19e family protein 0.79 0.32 -0.31
17 AT5G06360 Ribosomal protein S8e family protein 0.78 0.33 -0.31
18 AT1G66070 Translation initiation factor eIF3 subunit 0.78 0.32 -0.3
19 AT3G15640 Rubredoxin-like superfamily protein 0.78 0.3 -0.33
20 AT5G26710 Glutamyl/glutaminyl-tRNA synthetase, class Ic 0.78 0.3 -0.33
21 AT3G25940 TFIIB zinc-binding protein 0.77 0.32 -0.31
22 AT5G23050 acyl-activating enzyme 17 acyl-activating enzyme 17 -0.77 0.32 -0.3
23 AT4G24440 transcription initiation factor IIA gamma chain /
TFIIA-gamma (TFIIA-S)		 0.77 0.31 -0.31
24 AT3G62940 Cysteine proteinases superfamily protein 0.77 0.32 -0.3
25 AT5G39900 Small GTP-binding protein 0.76 0.3 -0.33
26 AT2G16500 arginine decarboxylase 1 arginine decarboxylase 1, ARGDC,
ARGDC1, SPE1		 0.76 0.33 -0.34
27 AT3G61140 26S proteasome, regulatory subunit Rpn7;Proteasome
component (PCI) domain		 ARABIDOPSIS THALIANA FUSCA 6,
SHAGGY-LIKE KINASE 31,
CONSTITUTIVE PHOTOMORPHOGENIC 11,
COP9 SIGNALOSOME SUBUNIT 1, EMBRYO
DEFECTIVE 78, FUSCA 6, SHAGGY-LIKE
KINASE 31		 0.76 0.32 -0.33
28 AT5G05450 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.75 0.33 -0.31
29 AT2G32070 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.75 0.32 -0.34
30 AT3G02220 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2039 (InterPro:IPR019351); Has 215
Blast hits to 215 proteins in 94 species: Archae - 2;
Bacteria - 2; Metazoa - 125; Fungi - 4; Plants - 38;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.74 0.3 -0.31
31 AT1G56070 Ribosomal protein S5/Elongation factor G/III/V family
protein		 LOW EXPRESSION OF OSMOTICALLY
RESPONSIVE GENES 1		 0.74 0.32 -0.31
32 AT1G26850 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.73 0.3 -0.31
33 AT3G22320 Eukaryotic rpb5 RNA polymerase subunit family protein ATRPABC24.3, NRPB5, NRPD5, RNA
POLYMERASE II FIFTH LARGEST
SUBUNIT, A		 0.73 0.32 -0.32
34 AT4G24940 SUMO-activating enzyme 1A AT-SAE1-1, SUMO-ACTIVATING ENZYME
1A, SUMO-activating enzyme 1A		 0.73 0.32 -0.34
35 AT1G30500 nuclear factor Y, subunit A7 nuclear factor Y, subunit A7 -0.73 0.32 -0.28
36 AT4G32400 Mitochondrial substrate carrier family protein ARABIDOPSIS THALIANA BRITTLE 1,
EMBRYO DEFECTIVE 104, EMBRYO
DEFECTIVE 42, SODIUM
HYPERSENSITIVE 1		 0.73 0.32 -0.31
37 AT5G58660 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.73 0.31 -0.31
38 AT1G04510 MOS4-associated complex 3A MOS4-associated complex 3A 0.73 0.31 -0.31
39 AT3G52070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 23 Blast hits to 23 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.71 0.3 -0.33
40 AT5G01770 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1A, RAPTOR1A, RAPTOR2 -0.7 0.33 -0.29
41 AT5G37670 HSP20-like chaperones superfamily protein -0.7 0.33 -0.3
42 AT1G79380 Ca(2)-dependent phospholipid-binding protein (Copine)
family		 -0.68 0.32 -0.31
43 AT3G10940 dual specificity protein phosphatase (DsPTP1) family
protein		 LIKE SEX4 2 -0.67 0.32 -0.32
44 AT3G10420 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 SEEDLING PLASTID DEVELOPMENT 1 -0.67 0.31 -0.31
45 AT5G16490 ROP-interactive CRIB motif-containing protein 4 ROP-interactive CRIB
motif-containing protein 4		 -0.66 0.32 -0.3
46 AT5G63200 tetratricopeptide repeat (TPR)-containing protein -0.66 0.34 -0.32
47 AT1G71480 Nuclear transport factor 2 (NTF2) family protein -0.65 0.32 -0.3
48 AT3G20420 RNAse THREE-like protein 2 RNASEIII-LIKE 2, RNAse THREE-like
protein 2		 -0.64 0.31 -0.31
49 AT1G68710 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.62 0.31 -0.33
50 AT3G24760 Galactose oxidase/kelch repeat superfamily protein -0.61 0.34 -0.32
51 AT1G54230 Winged helix-turn-helix transcription repressor DNA-binding -0.61 0.33 -0.33
52 AT4G08160 glycosyl hydrolase family 10 protein / carbohydrate-binding
domain-containing protein		 -0.6 0.31 -0.3
53 AT1G76040 calcium-dependent protein kinase 29 calcium-dependent protein kinase
29		 -0.6 0.32 -0.32
54 AT1G15320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower; EXPRESSED
DURING: petal differentiation and expansion stage; Has 62
Blast hits to 62 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.3 -0.33
55 AT5G66880 sucrose nonfermenting 1(SNF1)-related protein kinase 2.3 SUCROSE NONFERMENTING 1
(SNF1)-RELATED PROTEIN KINASE 2-3,
sucrose nonfermenting
1(SNF1)-related protein kinase
2.3, SRK2I		 -0.58 0.33 -0.32
56 AT1G78790 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF2008
(InterPro:IPR018552); Has 27 Blast hits to 27 proteins in
13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.58 0.3 -0.32
57 AT4G27435 Protein of unknown function (DUF1218) -0.58 0.29 -0.32
58 AT5G40910 Disease resistance protein (TIR-NBS-LRR class) family -0.58 0.34 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
59 C0158 MST_1480.5 - - - -0.72 0.43 -0.44
60 C0072 Cyanidin 3-O-[2''-O-(xylosyl) glucoside] 5-O-glucoside - - - -0.7 0.45 -0.45
61 C0254 Threonine D,L-Threonine L-Threonine isoleucine biosynthesis I (from threonine),
glycine biosynthesis,
threonine biosynthesis from homoserine,
tRNA charging 		-0.61 0.31 -0.31 C0254
62 C0235 Sinapoyl malate Sinapoyl-(S)-malate Sinapoyl-(S)-malate sinapate ester biosynthesis -0.59 0.31 -0.33 C0235