AT4G15510 : -
Query Information
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AGICode AT4G15510
Description Photosystem II reaction center PsbP family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G15510 Photosystem II reaction center PsbP family protein 1 0.33 -0.31
2 AT1G07320 ribosomal protein L4 EMBRYO DEFECTIVE 2784, ribosomal
protein L4		 0.95 0.3 -0.32
3 AT4G09650 ATP synthase delta-subunit gene ATP synthase delta-subunit gene,
PIGMENT DEFECTIVE 332		 0.94 0.31 -0.3
4 AT1G03680 thioredoxin M-type 1 thioredoxin M-type 1, ARABIDOPSIS
THIOREDOXIN M-TYPE 1, thioredoxin
M-type 1, THIOREDOXIN M-TYPE 1		 0.94 0.31 -0.34
5 AT2G29180 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 34
Blast hits to 33 proteins in 16 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 0.93 0.33 -0.3
6 AT5G07020 proline-rich family protein 0.93 0.33 -0.31
7 AT1G48350 Ribosomal L18p/L5e family protein EMBRYO DEFECTIVE 3105 0.93 0.32 -0.31
8 AT3G15360 thioredoxin M-type 4 ATHM4, ARABIDOPSIS THIOREDOXIN
M-TYPE 4, thioredoxin M-type 4		 0.93 0.31 -0.29
9 AT1G03475 Coproporphyrinogen III oxidase ATCPO-I, HEMF1, LESION INITIATION
2		 0.93 0.31 -0.35
10 AT3G13120 Ribosomal protein S10p/S20e family protein 0.93 0.31 -0.34
11 AT1G55370 NDH-dependent cyclic electron flow 5 NDH-dependent cyclic electron flow
5		 0.92 0.32 -0.33
12 AT3G04790 Ribose 5-phosphate isomerase, type A protein EMBRYO DEFECTIVE 3119 0.92 0.31 -0.32
13 AT1G01080 RNA-binding (RRM/RBD/RNP motifs) family protein 0.92 0.34 -0.3
14 AT1G75690 DnaJ/Hsp40 cysteine-rich domain superfamily protein LOW QUANTUM YIELD OF PHOTOSYSTEM
II 1		 0.92 0.32 -0.32
15 AT4G32260 ATPase, F0 complex, subunit B/B', bacterial/chloroplast PIGMENT DEFECTIVE 334 0.92 0.3 -0.29
16 AT1G32550 2Fe-2S ferredoxin-like superfamily protein ferredoxin C 1 0.92 0.31 -0.32
17 AT1G68590 Ribosomal protein PSRP-3/Ycf65 0.92 0.32 -0.31
18 AT5G14320 Ribosomal protein S13/S18 family EMBRYO DEFECTIVE 3137 0.92 0.32 -0.33
19 AT3G53900 uracil phosphoribosyltransferase PYRIMIDINE R, uracil
phosphoribosyltransferase		 0.92 0.32 -0.31
20 AT2G37660 NAD(P)-binding Rossmann-fold superfamily protein 0.92 0.33 -0.31
21 AT4G24930 thylakoid lumenal 17.9 kDa protein, chloroplast 0.92 0.32 -0.29
22 AT5G52960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3143 (InterPro:IPR021489);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.91 0.32 -0.29
23 AT5G18660 NAD(P)-binding Rossmann-fold superfamily protein PALE-GREEN AND CHLOROPHYLL B
REDUCED 2		 0.91 0.31 -0.33
24 AT5G58250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF2488
(InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 EMBRYO DEFECTIVE 3143 0.91 0.34 -0.32
25 AT3G28460 methyltransferases 0.91 0.31 -0.3
26 AT5G66530 Galactose mutarotase-like superfamily protein 0.91 0.32 -0.31
27 AT1G15820 light harvesting complex photosystem II subunit 6 CP24, light harvesting complex
photosystem II subunit 6		 0.91 0.31 -0.3
28 AT1G67700 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 49
Blast hits to 49 proteins in 20 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses
- 0; Other Eukaryotes - 5 (source: NCBI BLink).		 0.91 0.31 -0.32
29 AT1G32470 Single hybrid motif superfamily protein 0.91 0.31 -0.29
30 AT5G20935 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF3148 (InterPro:IPR021495); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.91 0.31 -0.31
31 AT5G53490 Tetratricopeptide repeat (TPR)-like superfamily protein 0.91 0.32 -0.3
32 AT3G08920 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.91 0.31 -0.32
33 AT1G55480 protein containing PDZ domain, a K-box domain, and a TPR
region		 protein containing PDZ domain, a
K-box domain, and a TPR region		 0.91 0.31 -0.32
34 AT1G05190 Ribosomal protein L6 family embryo defective 2394 0.91 0.32 -0.3
35 AT4G04640 ATPase, F1 complex, gamma subunit protein ATPC1 0.91 0.31 -0.35
36 AT1G67740 photosystem II BY photosystem II BY, YCF32 0.91 0.31 -0.32
37 AT4G03280 photosynthetic electron transfer C photosynthetic electron transfer
C, PROTON GRADIENT REGULATION 1		 0.9 0.33 -0.3
38 AT2G40490 Uroporphyrinogen decarboxylase HEME2 0.9 0.29 -0.3
39 AT5G45930 magnesium chelatase i2 CHL I2, CHLI-2, magnesium
chelatase i2		 0.9 0.31 -0.33
40 AT3G54210 Ribosomal protein L17 family protein 0.9 0.33 -0.31
41 AT3G55040 glutathione transferase lambda 2 glutathione transferase lambda 2 0.9 0.31 -0.3
42 AT5G14660 peptide deformylase 1B ATDEF2, DEF2, peptide deformylase
1B		 0.9 0.32 -0.31
43 AT1G78630 Ribosomal protein L13 family protein embryo defective 1473 0.9 0.31 -0.32
44 AT2G30200 catalytics;transferases;[acyl-carrier-protein]
S-malonyltransferases;binding		 EMBRYO DEFECTIVE 3147 0.9 0.31 -0.33
45 AT5G01530 light harvesting complex photosystem II light harvesting complex
photosystem II		 0.9 0.3 -0.32
46 AT2G33450 Ribosomal L28 family 0.9 0.31 -0.36
47 AT1G75350 Ribosomal protein L31 embryo defective 2184 0.9 0.32 -0.32
48 AT3G54050 high cyclic electron flow 1 high cyclic electron flow 1 0.9 0.32 -0.32
49 AT1G14270 CAAX amino terminal protease family protein 0.9 0.32 -0.34
50 AT2G28930 protein kinase 1B protein kinase 1B, protein kinase
1B		 0.9 0.3 -0.31
51 AT4G18480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHLORINA 42, CHLORINA 42, CHL11,
CHLI-1, CHLI1		 0.9 0.32 -0.29
52 AT2G26930 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5'-phospho)-2-C-methyl-D-erithrito
l kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, 4-(cytidine
5′-diphospho)-2-C-methyl-d-e
rythritol kinase, ISPE, PIGMENT
DEFECTIVE 277		 0.9 0.32 -0.32
53 AT2G42220 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.9 0.33 -0.3
54 AT3G25920 ribosomal protein L15 ribosomal protein L15 0.9 0.33 -0.3
55 AT4G39620 Tetratricopeptide repeat (TPR)-like superfamily protein A. THALIANA PENTATRICOPEPTIDE
REPEAT 5, EMBRYO DEFECTIVE 2453		 0.9 0.31 -0.31
56 AT5G54270 light-harvesting chlorophyll B-binding protein 3 light-harvesting chlorophyll
B-binding protein 3, LHCB3*1		 0.9 0.34 -0.32
57 AT1G08540 RNApolymerase sigma subunit 2 ABC1, SIGMA FACTOR 1, SIGMA FACTOR
2, RNA POLYMERASE SIGMA SUBUNIT 1,
RNApolymerase sigma subunit 2,
SIGA, SIGMA FACTOR B		 0.9 0.31 -0.31
58 AT1G15730 Cobalamin biosynthesis CobW-like protein 0.89 0.32 -0.32
59 AT1G76450 Photosystem II reaction center PsbP family protein 0.89 0.31 -0.33
60 AT3G21055 photosystem II subunit T photosystem II subunit T 0.89 0.29 -0.3
61 AT5G27290 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G54680.3); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.89 0.33 -0.32
62 AT1G62780 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 14 growth stages; Has 94
Blast hits to 94 proteins in 35 species: Archae - 6;
Bacteria - 10; Metazoa - 21; Fungi - 2; Plants - 48;
Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).		 0.89 0.32 -0.32
63 AT2G35500 shikimate kinase like 2 shikimate kinase-like 2 0.89 0.33 -0.33
64 AT5G11480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.89 0.32 -0.32
65 AT1G16880 uridylyltransferase-related ACT domain repeats 11 0.89 0.32 -0.33
66 AT5G06290 2-cysteine peroxiredoxin B 2-cysteine peroxiredoxin B, 2-CYS
PEROXIREDOXIN B		 0.89 0.33 -0.31
67 AT5G14910 Heavy metal transport/detoxification superfamily protein 0.89 0.32 -0.32
68 AT1G33040 nascent polypeptide-associated complex subunit alpha-like
protein 5		 nascent polypeptide-associated
complex subunit alpha-like protein
5		 0.89 0.31 -0.29
69 AT1G64770 NDH-dependent cyclic electron flow 1 NDH-dependent cyclic electron flow
1, NAD(P)H DEHYDROGENASE SUBUNIT
45, Photosynthetic NDH subcomplex
B 2		 0.89 0.32 -0.32
70 AT1G01970 Tetratricopeptide repeat (TPR)-like superfamily protein 0.89 0.29 -0.31
71 AT1G32060 phosphoribulokinase phosphoribulokinase 0.89 0.3 -0.34
72 AT1G20020 ferredoxin-NADP(+)-oxidoreductase 2 LEAF FNR 2,
ferredoxin-NADP(+)-oxidoreductase
2		 0.89 0.32 -0.31
73 AT2G03420 unknown protein; Has 38 Blast hits to 38 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.89 0.29 -0.32
74 AT4G02770 photosystem I subunit D-1 photosystem I subunit D-1 0.89 0.34 -0.31
75 AT5G42070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
21 plant structures; EXPRESSED DURING: 13 growth stages;
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.89 0.3 -0.33
76 AT3G14110 Tetratricopeptide repeat (TPR)-like superfamily protein FLUORESCENT IN BLUE LIGHT 0.89 0.33 -0.32
77 AT1G50900 Ankyrin repeat family protein Grana Deficient Chloroplast 1,
LHCP translocation defect		 0.89 0.3 -0.33
78 AT5G51545 low psii accumulation2 low psii accumulation2 0.89 0.32 -0.3
79 AT3G23700 Nucleic acid-binding proteins superfamily 0.89 0.3 -0.33
80 AT5G38520 alpha/beta-Hydrolases superfamily protein 0.89 0.31 -0.31
81 AT3G48730 glutamate-1-semialdehyde 2,1-aminomutase 2 glutamate-1-semialdehyde
2,1-aminomutase 2		 0.89 0.31 -0.31
82 AT3G55800 sedoheptulose-bisphosphatase sedoheptulose-bisphosphatase 0.89 0.29 -0.3
83 AT1G44920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3054 (InterPro:IPR021414);
Has 246 Blast hits to 246 proteins in 119 species: Archae -
14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45;
Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).		 0.88 0.32 -0.3
84 AT3G19480 D-3-phosphoglycerate dehydrogenase 0.88 0.33 -0.32
85 AT3G15190 chloroplast 30S ribosomal protein S20, putative 0.88 0.33 -0.32
86 AT3G12780 phosphoglycerate kinase 1 phosphoglycerate kinase 1 0.88 0.32 -0.32
87 AT3G14930 Uroporphyrinogen decarboxylase HEME1 0.88 0.34 -0.31
88 AT5G02120 one helix protein one helix protein, PIGMENT
DEFECTIVE 335		 0.88 0.31 -0.34
89 AT3G25530 glyoxylate reductase 1 ATGHBDH, GHBDH, glyoxylate
reductase 1, GLYOXYLATE REDUCTASE
1		 0.88 0.3 -0.31
90 AT3G62910 Peptide chain release factor 1 ALBINO AND PALE GREEN 0.88 0.31 -0.31
91 AT4G37510 Ribonuclease III family protein 0.88 0.33 -0.31
92 AT4G34190 stress enhanced protein 1 stress enhanced protein 1 0.88 0.29 -0.33
93 AT4G28660 photosystem II reaction center PSB28 protein photosystem II reaction center
PSB28 protein		 0.88 0.33 -0.32
94 AT4G30620 Uncharacterised BCR, YbaB family COG0718 0.88 0.35 -0.32
95 AT5G55230 microtubule-associated proteins 65-1 microtubule-associated proteins
65-1, MAP65-1,
microtubule-associated proteins
65-1		 0.88 0.34 -0.29
96 AT5G38290 Peptidyl-tRNA hydrolase family protein 0.88 0.32 -0.32
97 AT1G73655 FKBP-like peptidyl-prolyl cis-trans isomerase family
protein		 0.88 0.31 -0.31
98 AT3G02730 thioredoxin F-type 1 ATF1, thioredoxin F-type 1 0.88 0.32 -0.3
99 AT1G20340 Cupredoxin superfamily protein DNA-DAMAGE-REPAIR/TOLERATION
PROTEIN 112, PLASTOCYANIN 2		 0.88 0.31 -0.31
100 AT1G03630 protochlorophyllide oxidoreductase C protochlorophyllide oxidoreductase
C, PORC		 0.88 0.31 -0.32
101 AT5G57030 Lycopene beta/epsilon cyclase protein LUTEIN DEFICIENT 2 0.88 0.32 -0.34
102 AT5G44790 copper-exporting ATPase / responsive-to-antagonist 1 /
copper-transporting ATPase (RAN1)		 HMA7, RESPONSIVE-TO-ANTAGONIST 1 -0.84 0.32 -0.28
103 AT1G20490 AMP-dependent synthetase and ligase family protein -0.83 0.33 -0.33
104 AT1G64060 respiratory burst oxidase protein F respiratory burst oxidase protein
F, ARABIDOPSIS THALIANA
RESPIRATORY BURST OXIDASE HOMOLOG
F, respiratory burst oxidase
protein F, RBOHAP108, RESPIRATORY
BURST OXIDASE PROTEIN F		 -0.82 0.31 -0.3
105 AT5G24430 Calcium-dependent protein kinase (CDPK) family protein -0.81 0.3 -0.33
106 AT5G24290 Vacuolar iron transporter (VIT) family protein -0.8 0.31 -0.33
107 AT5G66170 sulfurtransferase 18 sulfurtransferase 18 -0.8 0.31 -0.32
108 AT1G75450 cytokinin oxidase 5 ARABIDOPSIS THALIANA CYTOKININ
OXIDASE 5, CYTOKININ OXIDASE 6,
cytokinin oxidase 5		 -0.79 0.32 -0.3
109 AT5G13820 telomeric DNA binding protein 1 ATBP-1, ATBP1, ATTBP1, H-PROTEIN
PROMOTE, telomeric DNA binding
protein 1		 -0.79 0.31 -0.32
110 AT1G76470 NAD(P)-binding Rossmann-fold superfamily protein -0.78 0.37 -0.33
111 AT4G39270 Leucine-rich repeat protein kinase family protein -0.78 0.31 -0.33
112 AT5G15730 Protein kinase superfamily protein AtCRLK2,
calcium/calmodulin-regulated
receptor-like kinase 2		 -0.78 0.36 -0.31
113 AT5G02170 Transmembrane amino acid transporter family protein -0.78 0.31 -0.32
114 AT3G16340 pleiotropic drug resistance 1 ATP-binding cassette G29,
PLEIOTROPIC DRUG RESISTANCE 1,
pleiotropic drug resistance 1		 -0.77 0.33 -0.32
115 AT1G70300 K+ uptake permease 6 K+ uptake permease 6 -0.77 0.31 -0.31
116 AT1G79710 Major facilitator superfamily protein -0.77 0.31 -0.31
117 AT1G03080 kinase interacting (KIP1-like) family protein -0.77 0.33 -0.31
118 AT2G34500 cytochrome P450, family 710, subfamily A, polypeptide 1 cytochrome P450, family 710,
subfamily A, polypeptide 1		 -0.77 0.32 -0.3
119 AT1G63440 heavy metal atpase 5 heavy metal atpase 5 -0.76 0.34 -0.32
120 AT1G18260 HCP-like superfamily protein EMS-mutagenized bri1 suppressor 5,
HRD3A		 -0.76 0.31 -0.29
121 AT5G16680 RING/FYVE/PHD zinc finger superfamily protein -0.76 0.33 -0.31
122 AT2G29065 GRAS family transcription factor -0.76 0.31 -0.32
123 AT5G43100 Eukaryotic aspartyl protease family protein -0.75 0.33 -0.32
124 AT1G26730 EXS (ERD1/XPR1/SYG1) family protein -0.75 0.31 -0.3
125 AT2G02970 GDA1/CD39 nucleoside phosphatase family protein -0.75 0.35 -0.31
126 AT5G57150 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.75 0.32 -0.3
127 AT2G14120 dynamin related protein dynamin related protein -0.75 0.32 -0.32
128 AT1G69450 Early-responsive to dehydration stress protein (ERD4) -0.74 0.33 -0.31
129 AT3G05360 receptor like protein 30 receptor like protein 30, receptor
like protein 30		 -0.74 0.3 -0.33
130 AT1G07510 FTSH protease 10 FTSH protease 10 -0.73 0.33 -0.33
131 AT4G14010 ralf-like 32 ralf-like 32 -0.73 0.31 -0.29
132 AT3G51440 Calcium-dependent phosphotriesterase superfamily protein -0.73 0.33 -0.32
133 AT5G65750 2-oxoglutarate dehydrogenase, E1 component -0.73 0.32 -0.32
134 AT5G58730 pfkB-like carbohydrate kinase family protein -0.73 0.32 -0.33
135 AT2G41850 polygalacturonase abscission zone A. thaliana ARABIDOPSIS DEHISCENCE ZONE
POLYGALACTURONASE 2,
polygalacturonase abscission zone
A. thaliana		 -0.73 0.3 -0.33
136 AT2G22330 cytochrome P450, family 79, subfamily B, polypeptide 3 cytochrome P450, family 79,
subfamily B, polypeptide 3		 -0.73 0.31 -0.32
137 AT4G24520 P450 reductase 1 ARABIDOPSIS CYTOCHROME REDUCTASE,
P450 reductase 1		 -0.73 0.3 -0.31
138 AT5G63905 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 20 plant
structures; EXPRESSED DURING: 12 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.73 0.31 -0.33
139 AT5G12290 dgd1 suppressor 1 DGD1 SUPPRESSOR 1 -0.72 0.35 -0.3
140 AT2G17520 Endoribonuclease/protein kinase IRE1-like ARABIDOPSIS THALIANA INOSITOL
REQUIRING 1-2, INOSITOL REQUIRING
1-2, IRE1A		 -0.72 0.31 -0.33
141 AT1G30270 CBL-interacting protein kinase 23 ATCIPK23, CBL-interacting protein
kinase 23, LOW-K+-SENSITIVE 1,
SOS2-like protein kinase 17,
SNF1-RELATED PROTEIN KINASE 3.23		 -0.72 0.3 -0.3