AT4G14020 : -
Query Information
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AGICode AT4G14020
Description Rapid alkalinization factor (RALF) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G14020 Rapid alkalinization factor (RALF) family protein 1 0.31 -0.32
2 AT4G19840 phloem protein 2-A1 phloem protein 2-A1, phloem
protein 2-A1, phloem protein 2-A1		 0.81 0.32 -0.32
3 AT2G35840 Sucrose-6F-phosphate phosphohydrolase family protein 0.79 0.33 -0.33
4 AT4G17840 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast,
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Abortive infection protein (InterPro:IPR003675); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G35260.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.78 0.31 -0.35
5 AT4G24450 phosphoglucan, water dikinase ATGWD2, GWD3, phosphoglucan, water
dikinase		 0.76 0.32 -0.34
6 AT5G45350 proline-rich family protein 0.76 0.31 -0.31
7 AT3G01200 PPDK regulatory protein 2 PPDK regulatory protein 2, PPDK
regulatory protein 2		 0.76 0.33 -0.32
8 AT1G33270 Acyl transferase/acyl hydrolase/lysophospholipase
superfamily protein		 0.76 0.31 -0.32
9 AT1G28140 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF2301, transmembrane
(InterPro:IPR019275); Has 140 Blast hits to 140 proteins in
72 species: Archae - 0; Bacteria - 86; Metazoa - 10; Fungi
- 0; Plants - 41; Viruses - 0; Other Eukaryotes - 3
(source: NCBI BLink).		 0.76 0.32 -0.32
10 AT1G64370 unknown protein; Has 773 Blast hits to 375 proteins in 118
species: Archae - 0; Bacteria - 97; Metazoa - 421; Fungi -
108; Plants - 31; Viruses - 0; Other Eukaryotes - 116
(source: NCBI BLink).		 0.76 0.29 -0.3
11 AT1G29090 Cysteine proteinases superfamily protein -0.75 0.32 -0.31
12 AT5G63080 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.74 0.33 -0.33
13 AT5G08380 alpha-galactosidase 1 alpha-galactosidase 1,
alpha-galactosidase 1		 0.74 0.3 -0.35
14 AT3G23400 Plastid-lipid associated protein PAP / fibrillin family
protein		 fibrillin 4 0.74 0.33 -0.3
15 AT1G73040 Mannose-binding lectin superfamily protein 0.74 0.31 -0.31
16 AT5G02790 Glutathione S-transferase family protein Glutathione transferase L3 0.74 0.31 -0.34
17 AT1G73740 UDP-Glycosyltransferase superfamily protein 0.73 0.33 -0.32
18 AT4G17370 Oxidoreductase family protein 0.73 0.32 -0.33
19 AT4G36210 Protein of unknown function (DUF726) 0.73 0.32 -0.31
20 AT3G60810 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1499 (InterPro:IPR010865); Has 444
Blast hits to 444 proteins in 143 species: Archae - 0;
Bacteria - 268; Metazoa - 0; Fungi - 0; Plants - 51;
Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink).		 0.72 0.3 -0.32
21 AT3G25740 methionine aminopeptidase 1C methionine aminopeptidase 1C,
METHIONINE AMINOPEPTIDASE 1C		 0.72 0.29 -0.31
22 AT3G63520 carotenoid cleavage dioxygenase 1 CAROTENOID CLEAVAGE DIOXYGENASE 1,
ATNCED1, carotenoid cleavage
dioxygenase 1, NCED1		 0.72 0.3 -0.33
23 AT5G22440 Ribosomal protein L1p/L10e family -0.72 0.32 -0.32
24 AT1G77550 tubulin-tyrosine ligases;tubulin-tyrosine ligases -0.72 0.32 -0.34
25 AT1G79760 downstream target of AGL15-4 downstream target of AGL15-4 -0.72 0.31 -0.33
26 AT1G08360 Ribosomal protein L1p/L10e family -0.72 0.31 -0.3
27 AT1G12200 Flavin-binding monooxygenase family protein flavin monooxygenase 0.72 0.31 -0.33
28 AT2G25010 Aminotransferase-like, plant mobile domain family protein 0.72 0.34 -0.31
29 AT1G53280 Class I glutamine amidotransferase-like superfamily protein DJ-1 homolog B, DJ-1 homolog B 0.72 0.3 -0.31
30 AT5G03840 PEBP (phosphatidylethanolamine-binding protein) family
protein		 TERMINAL FLOWER 1, TERMINAL FLOWER
1		 -0.72 0.34 -0.32
31 AT3G48100 response regulator 5 response regulator 5, ARABIDOPSIS
THALIANA RESPONSE REGULATOR 2,
INDUCED BY CYTOKININ 6, response
regulator 5		 -0.72 0.31 -0.29
32 AT1G49760 poly(A) binding protein 8 poly(A) binding protein 8, POLY(A)
BINDING PROTEIN 8		 -0.71 0.32 -0.32
33 AT4G38460 geranylgeranyl reductase geranylgeranyl reductase 0.71 0.29 -0.34
34 AT4G29070 Phospholipase A2 family protein 0.71 0.32 -0.3
35 AT1G63660 GMP synthase (glutamine-hydrolyzing), putative / glutamine
amidotransferase, putative		 -0.71 0.32 -0.32
36 AT5G04080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 16 plant structures; EXPRESSED
DURING: 9 growth stages; Has 115 Blast hits to 115 proteins
in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 5; Plants - 110; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.71 0.3 -0.31
37 AT5G20900 jasmonate-zim-domain protein 12 jasmonate-zim-domain protein 12,
TIFY3B		 0.71 0.31 -0.32
38 AT5G17530 phosphoglucosamine mutase family protein 0.71 0.32 -0.3
39 AT5G10020 Leucine-rich receptor-like protein kinase family protein -0.71 0.32 -0.3
40 AT5G03080 Phosphatidic acid phosphatase (PAP2) family protein 0.71 0.32 -0.3
41 AT5G55480 SHV3-like 1 Glycerophosphodiester
phosphodiesterase (GDPD) like 4,
glycerophosphodiesterase-like 1,
SHV3-like 1		 -0.71 0.34 -0.32
42 AT3G45770 Polyketide synthase, enoylreductase family protein 0.7 0.34 -0.3
43 AT3G15840 post-illumination chlorophyll fluorescence increase post-illumination chlorophyll
fluorescence increase		 0.7 0.32 -0.3
44 AT2G37240 Thioredoxin superfamily protein 0.7 0.32 -0.31
45 AT5G49560 Putative methyltransferase family protein -0.7 0.31 -0.32
46 AT3G21360 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.7 0.31 -0.31
47 AT1G10030 homolog of yeast ergosterol28 homolog of yeast ergosterol28 -0.7 0.32 -0.32
48 AT3G22200 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 GAMMA-AMINOBUTYRATE TRANSAMINASE,
HEXENAL RESPONSE1, POLLEN-PISTIL
INCOMPATIBILITY 2		 0.7 0.31 -0.31
49 AT2G13820 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 AtXYP2, xylogen protein 2 -0.7 0.33 -0.29
50 AT4G20440 small nuclear ribonucleoprotein associated protein B small nuclear ribonucleoprotein
associated protein B		 -0.7 0.32 -0.32
51 AT4G22740 glycine-rich protein 0.7 0.31 -0.31
52 AT3G52880 monodehydroascorbate reductase 1 monodehydroascorbate reductase 1,
monodehydroascorbate reductase 1		 0.7 0.32 -0.3
53 AT5G50160 ferric reduction oxidase 8 FERRIC REDUCTION OXIDASE 8, ferric
reduction oxidase 8		 0.69 0.33 -0.31
54 AT3G15650 alpha/beta-Hydrolases superfamily protein 0.69 0.31 -0.31
55 AT2G35490 Plastid-lipid associated protein PAP / fibrillin family
protein		 0.69 0.3 -0.3
56 AT1G78120 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 12 -0.69 0.3 -0.31
57 AT2G24820 translocon at the inner envelope membrane of chloroplasts
55-II		 translocon at the inner envelope
membrane of chloroplasts 55,
translocon at the inner envelope
membrane of chloroplasts 55,
translocon at the inner envelope
membrane of chloroplasts 55-II		 0.69 0.3 -0.29
58 AT4G37000 accelerated cell death 2 (ACD2) ACCELERATED CELL DEATH 2,
ARABIDOPSIS THALIANA RED
CHLOROPHYLL CATABOLITE REDUCTASE		 0.69 0.3 -0.29
59 AT5G24380 YELLOW STRIPE like 2 YELLOW STRIPE LIKE 2, YELLOW
STRIPE like 2		 0.68 0.3 -0.35
60 AT5G40670 PQ-loop repeat family protein / transmembrane family
protein		 0.68 0.3 -0.32
61 AT5G57020 myristoyl-CoA:protein N-myristoyltransferase ARABIDOPSIS THALIANA
MYRISTOYL-COA:PROTEIN
N-MYRISTOYLTRANSFERASE,
myristoyl-CoA:protein
N-myristoyltransferase		 -0.68 0.27 -0.31
62 AT4G03200 catalytics 0.68 0.3 -0.31
63 AT1G07770 ribosomal protein S15A ribosomal protein S15A -0.68 0.3 -0.33
64 AT4G19960 K+ uptake permease 9 ATKUP9, HAK9, KT9, K+ uptake
permease 9		 0.68 0.35 -0.3
65 AT2G31660 ARM repeat superfamily protein enhanced miRNA activity 1, SUPER
SENSITIVE TO ABA AND DROUGHT2,
UNARMED 9		 -0.68 0.31 -0.31
66 AT1G64530 Plant regulator RWP-RK family protein -0.68 0.31 -0.31
67 AT5G20600 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: rRNA
processing; LOCATED IN: preribosome, small subunit
precursor; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Nucleolar, Nop52 (InterPro:IPR010301); Has 543 Blast hits
to 530 proteins in 201 species: Archae - 0; Bacteria - 10;
Metazoa - 211; Fungi - 164; Plants - 46; Viruses - 0; Other
Eukaryotes - 112 (source: NCBI BLink).		 -0.68 0.32 -0.31
68 AT2G45990 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 312
Blast hits to 312 proteins in 90 species: Archae - 0;
Bacteria - 131; Metazoa - 0; Fungi - 0; Plants - 67;
Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).		 0.68 0.32 -0.32
69 AT1G80410 tetratricopeptide repeat (TPR)-containing protein EMBRYO DEFECTIVE 2753, OMISHA -0.67 0.31 -0.34
70 AT4G27640 ARM repeat superfamily protein -0.67 0.32 -0.33
71 AT1G43130 like COV 2 like COV 2 0.67 0.3 -0.32
72 AT2G34700 Pollen Ole e 1 allergen and extensin family protein -0.67 0.33 -0.32
73 AT1G52590 Putative thiol-disulphide oxidoreductase DCC 0.67 0.33 -0.34
74 AT4G18610 Protein of unknown function (DUF640) LIGHT SENSITIVE HYPOCOTYLS 9 -0.67 0.33 -0.33
75 AT4G25650 ACD1-like ACD1-like,
PROTOCHLOROPHYLLIDE-DEPENDENT
TRANSLOCON COMPONENT, 52 KDA,
TRANSLOCON AT THE INNER ENVELOPE
MEMBRANE OF CHLOROPLASTS, 55 KDA -
IV		 0.66 0.32 -0.33
76 AT4G10250 HSP20-like chaperones superfamily protein ATHSP22.0 0.66 0.31 -0.3
77 AT4G14880 O-acetylserine (thiol) lyase (OAS-TL) isoform A1 ATCYS-3A, CYTACS1, O-acetylserine
(thiol) lyase (OAS-TL) isoform A1,
ONSET OF LEAF DEATH 3		 0.66 0.31 -0.31
78 AT5G37670 HSP20-like chaperones superfamily protein 0.66 0.32 -0.29
79 AT3G01260 Galactose mutarotase-like superfamily protein -0.66 0.31 -0.31
80 AT1G23130 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.66 0.32 -0.32
81 AT2G01830 CHASE domain containing histidine kinase protein ARABIDOPSIS HISTIDINE KINASE 4,
ATCRE1, CYTOKININ RESPONSE 1,
WOODEN LEG, WOODEN LEG 1		 -0.66 0.31 -0.3
82 AT1G11840 glyoxalase I homolog glyoxalase I homolog, glyoxalase I
homolog		 0.66 0.32 -0.29
83 AT2G39040 Peroxidase superfamily protein -0.66 0.32 -0.31
84 AT1G22985 Integrase-type DNA-binding superfamily protein cytokinin response factor 7 0.66 0.31 -0.33
85 AT2G14890 arabinogalactan protein 9 arabinogalactan protein 9 -0.65 0.32 -0.32
86 AT1G30840 purine permease 4 purine permease 4, purine permease
4		 -0.65 0.31 -0.32
87 AT5G17340 Putative membrane lipoprotein -0.65 0.34 -0.3
88 AT4G26720 protein phosphatase X 1 PROTEIN PHOSPHATASE X-1, protein
phosphatase X 1		 -0.65 0.32 -0.31
89 AT1G22880 cellulase 5 ARABIDOPSIS THALIANA CELLULASE 5,
ARABIDOPSIS THALIANA GLYCOSYL
HYDROLASE 9B4, cellulase 5		 -0.65 0.29 -0.3
90 AT3G62360 Carbohydrate-binding-like fold -0.64 0.33 -0.32
91 AT3G01630 Major facilitator superfamily protein -0.64 0.29 -0.31
92 AT3G26610 Pectin lyase-like superfamily protein -0.64 0.3 -0.32
93 AT5G45780 Leucine-rich repeat protein kinase family protein -0.63 0.3 -0.32
94 AT1G76010 Alba DNA/RNA-binding protein -0.63 0.31 -0.32
95 AT3G56900 Transducin/WD40 repeat-like superfamily protein -0.62 0.28 -0.3
96 AT1G08610 Pentatricopeptide repeat (PPR) superfamily protein -0.62 0.33 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
97 C0050 8-Methylthio-n-octylglucosinolate - 8-Methylthiooctyl glucosinolate glucosinolate biosynthesis from hexahomomethionine -0.82 0.44 -0.47 C0050
98 C0217 Putative glucosinole - - - -0.8 0.44 -0.4
99 C0125 isorhamnetin-3-O-glucoside - - - -0.75 0.44 -0.46
100 C0031 3-Methylthio-n-propylglucosinolate - 3-Methylthiopropylglucosinolate glucosinolate biosynthesis from homomethionine -0.75 0.44 -0.46 C0031
101 C0045 7-Methylthio-n-heptylglucosinolate - 7-Methylthioheptyl glucosinolate glucosinolate biosynthesis from pentahomomethionine -0.71 0.32 -0.33 C0045