AT4G17040 : CLP protease R subunit 4
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G17040
Description CLP protease R subunit 4
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G17040 CLP protease R subunit 4 CLP protease R subunit 4, happy on
norflurazon 5		 1 0.34 -0.3
2 AT2G17340 Uncharacterised conserved protein (UCP030210) 0.79 0.31 -0.31
3 AT4G33520 P-type ATP-ase 1 Arabidopsis thaliana heavy metal
ATPase 6, HEAVY METAL ATPASE 6,
P-type ATP-ase 1		 0.78 0.3 -0.32
4 AT5G45170 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.78 0.33 -0.32
5 AT3G06483 pyruvate dehydrogenase kinase ATPDHK, pyruvate dehydrogenase
kinase		 0.77 0.32 -0.31
6 AT5G06130 chaperone protein dnaJ-related 0.77 0.31 -0.31
7 AT1G11750 CLP protease proteolytic subunit 6 CLP protease proteolytic subunit
6, NUCLEAR-ENCODED CLPP 1, NCLPP6		 0.76 0.31 -0.31
8 AT3G10350 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.76 0.32 -0.31
9 AT5G19540 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 0.75 0.32 -0.31
10 AT5G12130 integral membrane TerC family protein TELLURITE RESISTANCE C, PIGMENT
DEFECTIVE 149		 0.75 0.29 -0.3
11 AT1G65260 plastid transcriptionally active 4 plastid transcriptionally active
4, VESICLE-INDUCING PROTEIN IN
PLASTIDS 1		 0.74 0.35 -0.31
12 AT3G11945 homogentisate prenyltransferase homogentisate prenyltransferase,
homogentisate prenyltransferase,
PHYTOENE DESATURATION 2		 0.74 0.33 -0.3
13 AT5G38660 acclimation of photosynthesis to environment ACCLIMATION OF PHOTOSYNTHESIS TO
ENVIRONMENT		 0.74 0.3 -0.32
14 AT2G30170 Protein phosphatase 2C family protein 0.74 0.3 -0.32
15 AT5G04440 Protein of unknown function (DUF1997) 0.74 0.31 -0.32
16 AT1G54520 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF1517 (InterPro:IPR010903);
Has 276 Blast hits to 275 proteins in 83 species: Archae -
0; Bacteria - 108; Metazoa - 6; Fungi - 0; Plants - 113;
Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).		 0.73 0.35 -0.31
17 AT2G03390 uvrB/uvrC motif-containing protein 0.73 0.33 -0.32
18 AT2G14260 proline iminopeptidase proline iminopeptidase 0.72 0.32 -0.32
19 AT2G03390 uvrB/uvrC motif-containing protein 0.72 0.31 -0.33
20 AT1G19320 Pathogenesis-related thaumatin superfamily protein 0.72 0.31 -0.29
21 AT5G47870 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
cobalt ion binding (TAIR:AT1G71310.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 radiation sensitive 51-2, RAD52-2B 0.72 0.31 -0.33
22 AT5G03880 Thioredoxin family protein 0.71 0.3 -0.3
23 AT4G33350 Tic22-like family protein translocon at the inner envelope
membrane of chloroplasts 22-IV,
translocon at the inner envelope
membrane of chloroplasts 22-IV		 0.71 0.33 -0.3
24 AT4G03520 Thioredoxin superfamily protein ATHM2 0.71 0.32 -0.32
25 AT3G10970 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.71 0.31 -0.33
26 AT3G02900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G16660.1); Has 80 Blast
hits to 80 proteins in 21 species: Archae - 0; Bacteria -
4; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.69 0.32 -0.32
27 AT4G33510 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase 3-deoxy-d-arabino-heptulosonate
7-phosphate synthase		 0.69 0.32 -0.31
28 AT2G26540 uroporphyrinogen-III synthase family protein DOMAIN OF UNKNOWN FUNCTION 724 3,
ARABIDOPSIS THALIANA
UROPORPHYRINOGEN III SYNTHASE,
DOMAIN OF UNKNOWN FUNCTION 724 3,
HEMD, UROPORPHYRINOGEN III
SYNTHASE		 0.69 0.31 -0.3
29 AT5G61570 Protein kinase superfamily protein 0.69 0.32 -0.32
30 AT1G09795 ATP phosphoribosyl transferase 2 ATP phosphoribosyl transferase 2,
ATP phosphoribosyl transferase 2,
HISN1B		 0.69 0.33 -0.32
31 AT1G25290 RHOMBOID-like protein 10 RHOMBOID-like protein 10,
RHOMBOID-like protein 10		 0.68 0.31 -0.32
32 AT2G04360 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink).		 0.68 0.31 -0.34
33 AT5G45390 CLP protease P4 CLP protease P4, NUCLEAR-ENCODED
CLP PROTEASE P4		 0.68 0.32 -0.31
34 AT1G27385 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF493 (InterPro:IPR007454);
Has 76 Blast hits to 76 proteins in 23 species: Archae - 0;
Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 69; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 0.68 0.31 -0.33
35 AT5G63060 Sec14p-like phosphatidylinositol transfer family protein 0.68 0.33 -0.3
36 AT5G14970 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G14910.1); Has 579 Blast hits
to 397 proteins in 95 species: Archae - 0; Bacteria - 294;
Metazoa - 0; Fungi - 0; Plants - 86; Viruses - 0; Other
Eukaryotes - 199 (source: NCBI BLink).		 0.68 0.32 -0.3
37 AT5G06580 FAD-linked oxidases family protein 0.68 0.3 -0.31
38 AT1G33330 Class I peptide chain release factor 0.67 0.31 -0.31
39 AT3G09150 phytochromobilin:ferredoxin oxidoreductase, chloroplast /
phytochromobilin synthase (HY2)		 ARABIDOPSIS ELONGATED HYPOCOTYL 2,
GENOMES UNCOUPLED 3, ELONGATED
HYPOCOTYL 2		 0.67 0.31 -0.31
40 AT1G79990 structural molecules 0.67 0.33 -0.31
41 AT1G21065 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Uncharacterised protein family UPF0047
(InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins
in 1137 species: Archae - 215; Bacteria - 2154; Metazoa -
42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes
- 1191 (source: NCBI BLink).		 0.67 0.32 -0.31
42 AT5G10810 enhancer of rudimentary protein, putative ARABIDOPSIS THALIANA ENHANCER OF
RUDIMENTARY HOMOLOGUE, ENHANCER OF
RUDIMENTARY HOMOLOGUE		 0.67 0.31 -0.31
43 AT5G17530 phosphoglucosamine mutase family protein 0.66 0.33 -0.3
44 AT1G52510 alpha/beta-Hydrolases superfamily protein 0.66 0.31 -0.33
45 AT1G64320 myosin heavy chain-related -0.66 0.31 -0.3
46 AT4G33460 ABC transporter family protein ATP-binding cassette I10, ATNAP13,
embryo defective 2751		 0.65 0.31 -0.32
47 AT3G54660 glutathione reductase ATGR2, EMB2360, glutathione
reductase		 0.65 0.32 -0.31
48 AT4G09580 SNARE associated Golgi protein family 0.65 0.33 -0.32
49 AT3G54860 Sec1/munc18-like (SM) proteins superfamily ATVPS33, VACUOLAR PROTEIN SORTING
33		 0.65 0.31 -0.31
50 AT2G42590 general regulatory factor 9 GF14 MU, general regulatory factor
9		 0.65 0.32 -0.32
51 AT2G41070 Basic-leucine zipper (bZIP) transcription factor family
protein		 ATBZIP12, DPBF4, ENHANCED EM LEVEL -0.65 0.32 -0.32
52 AT3G57230 AGAMOUS-like 16 AGAMOUS-like 16 0.64 0.33 -0.28
53 AT2G43750 O-acetylserine (thiol) lyase B ARABIDOPSIS CYSTEINE SYNTHASE 1,
ARABIDOPSIS THALIANA CYSTEIN
SYNTHASE-B, CHLOROPLAST
O-ACETYLSERINE SULFHYDRYLASE 1,
O-acetylserine (thiol) lyase B		 0.64 0.3 -0.32
54 AT3G08570 Phototropic-responsive NPH3 family protein -0.64 0.33 -0.33
55 AT3G44410 pseudogene, disease resistence protein, putative, similar
to disease resistance protein RPP1-WsB (Arabidopsis
thaliana) gi|3860165|gb|AAC72978		 0.63 0.3 -0.31
56 AT5G20060 alpha/beta-Hydrolases superfamily protein 0.63 0.33 -0.31
57 AT5G03420 5'-AMP-activated protein kinase-related 0.63 0.33 -0.33
58 AT3G47250 Plant protein of unknown function (DUF247) 0.63 0.3 -0.34
59 AT5G10460 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.63 0.3 -0.31
60 AT3G45410 Concanavalin A-like lectin protein kinase family protein -0.61 0.32 -0.3
61 AT2G47460 myb domain protein 12 MYB DOMAIN PROTEIN 12, myb domain
protein 12, PRODUCTION OF FLAVONOL
GLYCOSIDES 1		 -0.61 0.31 -0.31
62 AT4G14980 Cysteine/Histidine-rich C1 domain family protein -0.6 0.32 -0.32
63 AT3G07130 purple acid phosphatase 15 PURPLE ACID PHOSPHATASE 15, purple
acid phosphatase 15		 -0.6 0.33 -0.31
64 AT3G50990 Peroxidase superfamily protein -0.6 0.32 -0.31
65 AT4G20800 FAD-binding Berberine family protein -0.59 0.31 -0.32
66 AT5G47750 D6 protein kinase like 2 D6 protein kinase like 2, PK5 -0.59 0.33 -0.32
67 ATMG00670 hypothetical protein ORF275 -0.59 0.32 -0.3
68 AT4G37890 Zinc finger (C3HC4-type RING finger) family protein embryo sac development arrest 40 -0.59 0.34 -0.33
69 AT2G47680 zinc finger (CCCH type) helicase family protein -0.58 0.32 -0.33
70 AT3G24450 Heavy metal transport/detoxification superfamily protein -0.58 0.31 -0.34
71 AT4G08150 KNOTTED-like from Arabidopsis thaliana BREVIPEDICELLUS, BREVIPEDICELLUS
1, KNOTTED-like from Arabidopsis
thaliana		 -0.58 0.33 -0.32
72 AT4G09940 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.58 0.34 -0.3
73 AT5G40840 Rad21/Rec8-like family protein Sister chromatid cohesion 1 (SCC1)
protein homolog 2, SYN2		 -0.57 0.33 -0.3
74 AT2G21550 Bifunctional dihydrofolate reductase/thymidylate synthase -0.57 0.32 -0.34
75 AT1G34110 Leucine-rich receptor-like protein kinase family protein -0.57 0.31 -0.32
76 AT1G50660 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G20350.1); Has 21445 Blast hits to 15134 proteins
in 1325 species: Archae - 461; Bacteria - 2309; Metazoa -
11052; Fungi - 1737; Plants - 1035; Viruses - 42; Other
Eukaryotes - 4809 (source: NCBI BLink).		 -0.57 0.32 -0.32
77 AT3G15720 Pectin lyase-like superfamily protein -0.55 0.32 -0.33
78 AT3G55550 Concanavalin A-like lectin protein kinase family protein -0.55 0.33 -0.33
79 AT2G03190 SKP1-like 16 SKP1-like 16, SKP1-like 16 -0.53 0.32 -0.31
80 AT4G09290 transposable element gene -0.52 0.34 -0.34
81 AT5G44610 microtubule-associated protein 18 microtubule-associated protein 18,
PLASMA MEMBRANE ASSOCIATED
CA2+-BINDING PROTEIN-2		 -0.52 0.32 -0.29
82 AT1G64830 Eukaryotic aspartyl protease family protein -0.52 0.34 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
83 C0230 Rutin - - polyphenol biosynthesis -0.71 0.44 -0.45