AT4G17610 : -
Query Information
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AGICode AT4G17610
Description tRNA/rRNA methyltransferase (SpoU) family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G17610 tRNA/rRNA methyltransferase (SpoU) family protein 1 0.31 -0.29
2 AT3G44050 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.72 0.28 -0.3
3 AT2G48160 Tudor/PWWP/MBT domain-containing protein 0.71 0.3 -0.32
4 AT1G33410 SUPPRESSOR OF AUXIN RESISTANCE1 ARABIDOPSIS NUCLEOPORIN 160,
NUCLEOPORIN 160, SUPPRESSOR OF
AUXIN RESISTANCE1		 0.7 0.31 -0.32
5 AT3G14120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
transport; LOCATED IN: nuclear pore; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Nuclear pore protein 84/107
(InterPro:IPR007252); Has 5399 Blast hits to 5001 proteins
in 612 species: Archae - 19; Bacteria - 730; Metazoa -
2186; Fungi - 823; Plants - 382; Viruses - 37; Other
Eukaryotes - 1222 (source: NCBI BLink).		 0.68 0.31 -0.32
6 AT1G19290 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.32 -0.34
7 AT1G43320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 6 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.67 0.31 -0.31
8 AT1G63030 Integrase-type DNA-binding superfamily protein DWARF AND DELAYED FLOWERING 2 -0.67 0.35 -0.33
9 AT4G35480 RING-H2 finger A3B RING-H2 finger A3B -0.66 0.31 -0.3
10 AT4G15440 hydroperoxide lyase 1 CYP74B2, hydroperoxide lyase 1 -0.66 0.34 -0.3
11 AT1G11840 glyoxalase I homolog glyoxalase I homolog, glyoxalase I
homolog		 -0.66 0.33 -0.31
12 AT1G31260 zinc transporter 10 precursor zinc transporter 10 precursor -0.65 0.32 -0.32
13 AT5G50390 Pentatricopeptide repeat (PPR-like) superfamily protein EMBRYO DEFECTIVE 3141 0.65 0.32 -0.33
14 AT3G49000 RNA polymerase III subunit RPC82 family protein 0.65 0.31 -0.31
15 AT5G10190 Major facilitator superfamily protein -0.65 0.3 -0.31
16 AT2G31130 unknown protein; Has 116 Blast hits to 113 proteins in 44
species: Archae - 0; Bacteria - 3; Metazoa - 21; Fungi - 2;
Plants - 40; Viruses - 0; Other Eukaryotes - 50 (source:
NCBI BLink).		 -0.65 0.33 -0.3
17 AT4G23600 Tyrosine transaminase family protein CORONATINE INDUCED 1, JASMONIC
ACID RESPONSIVE 2		 -0.65 0.33 -0.33
18 AT1G19300 Nucleotide-diphospho-sugar transferases superfamily protein ATGATL1,
GALACTURONOSYLTRANSFERASE-LIKE 1,
GAOLAOZHUANGREN 1, PARVUS		 -0.64 0.3 -0.3
19 AT2G21510 DNAJ heat shock N-terminal domain-containing protein -0.64 0.29 -0.3
20 AT1G72940 Toll-Interleukin-Resistance (TIR) domain-containing protein -0.64 0.32 -0.32
21 AT5G37070 Protein of unknown function, DUF538 -0.64 0.32 -0.33
22 AT3G45140 lipoxygenase 2 ARABIODOPSIS THALIANA LIPOXYGENASE
2, lipoxygenase 2		 -0.64 0.31 -0.31
23 AT4G21140 BEST Arabidopsis thaliana protein match is: copper ion
binding (TAIR:AT4G05400.2); Has 41 Blast hits to 41
proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.64 0.31 -0.32
24 AT2G38000 chaperone protein dnaJ-related -0.64 0.33 -0.3
25 AT4G28400 Protein phosphatase 2C family protein -0.64 0.3 -0.3
26 AT5G17510 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G03460.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.64 0.33 -0.31
27 AT1G01550 Protein of unknown function (DUF793) BYPASS 1 -0.64 0.33 -0.31
28 AT3G15210 ethylene responsive element binding factor 4 ETHYLENE RESPONSIVE ELEMENT
BINDING FACTOR 4, ETHYLENE
RESPONSIVE ELEMENT BINDING FACTOR
4, ethylene responsive element
binding factor 4, RELATED TO AP2 5		 -0.63 0.3 -0.32
29 AT1G77720 putative protein kinase 1 putative protein kinase 1 0.63 0.31 -0.33
30 AT1G11050 Protein kinase superfamily protein -0.63 0.34 -0.31
31 AT1G66090 Disease resistance protein (TIR-NBS class) -0.62 0.33 -0.29
32 AT1G20510 OPC-8:0 CoA ligase1 OPC-8:0 CoA ligase1 -0.62 0.32 -0.31
33 AT5G17990 tryptophan biosynthesis 1 PHOSPHORIBOSYLANTHRANILATE
TRANSFERASE 1, tryptophan
biosynthesis 1		 -0.62 0.3 -0.32
34 AT2G21120 Protein of unknown function (DUF803) -0.62 0.32 -0.32
35 AT3G18215 Protein of unknown function, DUF599 0.62 0.33 -0.31
36 AT2G40810 homolog of yeast autophagy 18C homolog of yeast autophagy 18C,
homolog of yeast autophagy 18C		 -0.62 0.3 -0.31
37 AT1G64790 ILITYHIA ILITYHIA 0.62 0.33 -0.31
38 AT1G54440 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain		 0.61 0.34 -0.31
39 AT3G43600 aldehyde oxidase 2 aldehyde oxidase 2, aldehyde
oxidase 3, Aldehyde oxidase gamma,
Arabidopsis thaliana aldehyde
oxidase 2, Arabidopsis thaliana
aldehyde oxidase 3		 0.61 0.31 -0.31
40 AT1G74480 RWP-RK domain-containing protein AtRKD2, RWP-RK domain containing 2 -0.61 0.33 -0.33
41 AT4G36220 ferulic acid 5-hydroxylase 1 CYP84A1, ferulic acid
5-hydroxylase 1		 -0.61 0.33 -0.33
42 AT1G69630 F-box/RNI-like superfamily protein -0.61 0.31 -0.31
43 AT2G20630 PP2C induced by AVRRPM1 PP2C induced by AVRRPM1 -0.61 0.32 -0.33
44 AT1G33910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.61 0.35 -0.33
45 AT5G67300 myb domain protein r1 ARABIDOPSIS THALIANA MYB DOMAIN
PROTEIN 44, ATMYBR1, MYB44, myb
domain protein r1		 -0.61 0.33 -0.31
46 AT4G12720 MutT/nudix family protein Arabidopsis thaliana Nudix
hydrolase homolog 7, GROWTH FACTOR
GENE 1, NUDT7		 -0.6 0.32 -0.33
47 AT4G37740 growth-regulating factor 2 growth-regulating factor 2,
growth-regulating factor 2		 0.6 0.32 -0.29
48 AT5G42650 allene oxide synthase allene oxide synthase, CYTOCHROME
P450 74A, DELAYED DEHISCENCE 2		 -0.6 0.31 -0.3
49 AT2G16520 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; BEST Arabidopsis thaliana protein match is: zinc
finger (C3HC4-type RING finger) family protein
(TAIR:AT3G45560.1); Has 72 Blast hits to 69 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.31 -0.32
50 AT1G71010 FORMS APLOID AND BINUCLEATE CELLS 1C FORMS APLOID AND BINUCLEATE CELLS
1C		 0.6 0.33 -0.31
51 AT1G63350 Disease resistance protein (CC-NBS-LRR class) family -0.6 0.3 -0.32
52 AT4G11270 Transducin/WD40 repeat-like superfamily protein 0.6 0.3 -0.31
53 AT2G15550 transposable element gene 0.59 0.32 -0.31
54 AT1G35210 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF740 (InterPro:IPR008004);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G22470.1); Has 83 Blast hits to 83 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 81; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.59 0.32 -0.33
55 AT2G28170 Cation/hydrogen exchanger family protein ATCHX7, CATION/H+ EXCHANGER 7 0.59 0.3 -0.36
56 AT1G69840 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 -0.59 0.33 -0.32
57 AT1G80070 Pre-mRNA-processing-splicing factor EMBRYO DEFECTIVE 14, EMBRYO
DEFECTIVE 177, EMBRYO DEFECTIVE
33, ABNORMAL SUSPENSOR 2		 0.59 0.33 -0.32
58 AT3G42090 transposable element gene 0.58 0.29 -0.32
59 AT3G58600 Adaptin ear-binding coat-associated protein 1 NECAP-1 -0.58 0.33 -0.29
60 AT1G34190 NAC domain containing protein 17 NAC domain containing protein 17,
NAC domain containing protein 17		 -0.58 0.34 -0.3
61 AT3G23550 MATE efflux family protein -0.58 0.31 -0.32
62 AT1G19670 chlorophyllase 1 chlorophyllase 1,
CORONATINE-INDUCED PROTEIN 1,
chlorophyllase 1,
CORONATINE-INDUCED PROTEIN 1		 -0.58 0.3 -0.31
63 AT5G66210 calcium-dependent protein kinase 28 calcium-dependent protein kinase
28		 -0.58 0.32 -0.32
64 AT1G23890 NHL domain-containing protein 0.58 0.34 -0.33
65 AT2G01310 BEST Arabidopsis thaliana protein match is:
cyclin-dependent protein kinase 3;2 (TAIR:AT1G47210.1); Has
37 Blast hits to 37 proteins in 6 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.32 -0.31
66 AT3G62480 transposable element gene -0.58 0.33 -0.35
67 AT1G50590 RmlC-like cupins superfamily protein -0.58 0.31 -0.31
68 AT1G67120 ATPases;nucleotide binding;ATP
binding;nucleoside-triphosphatases;transcription factor
binding		 0.58 0.29 -0.32
69 AT1G22050 membrane-anchored ubiquitin-fold protein 6 precursor membrane-anchored ubiquitin-fold
protein 6 precursor		 -0.58 0.32 -0.32
70 AT1G31810 Formin Homology 14 Formin Homology 14 0.58 0.32 -0.31
71 AT1G17580 myosin 1 ARABIDOPSIS MYOSIN 1, myosin 1,
MYOSIN XI 1		 0.58 0.3 -0.32
72 AT1G72920 Toll-Interleukin-Resistance (TIR) domain family protein -0.57 0.31 -0.28
73 AT2G46400 WRKY DNA-binding protein 46 WRKY DNA-BINDING PROTEIN 46, WRKY
DNA-binding protein 46		 -0.57 0.32 -0.31
74 AT2G36980 Tetratricopeptide repeat (TPR)-like superfamily protein 0.57 0.32 -0.32
75 AT4G14170 Pentatricopeptide repeat (PPR) superfamily protein 0.57 0.3 -0.31
76 AT1G57630 Toll-Interleukin-Resistance (TIR) domain family protein -0.57 0.34 -0.31
77 AT3G58390 Eukaryotic release factor 1 (eRF1) family protein -0.57 0.31 -0.31
78 AT1G50380 Prolyl oligopeptidase family protein 0.57 0.3 -0.33
79 AT3G13370 unknown protein; Has 84 Blast hits to 50 proteins in 21
species: Archae - 0; Bacteria - 2; Metazoa - 51; Fungi - 6;
Plants - 20; Viruses - 0; Other Eukaryotes - 5 (source:
NCBI BLink).		 0.57 0.3 -0.32
80 AT3G61920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot, hypocotyl,
root, egg cell; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G64700.1); Has 77 Blast hits to 77
proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.56 0.31 -0.3
81 AT1G55640 prenylated RAB acceptor 1.G1 prenylated RAB acceptor 1.G1 0.56 0.3 -0.31
82 AT5G12030 heat shock protein 17.6A heat shock protein 17.6A, HEAT
SHOCK PROTEIN 17.6, heat shock
protein 17.6A		 -0.56 0.33 -0.31
83 AT5G05560 E3 ubiquitin ligase, putative EMBRYO DEFECTIVE 2771 0.56 0.33 -0.3
84 AT5G63980 Inositol monophosphatase family protein ALTERED EXPRESSION OF APX2 8,
ATSAL1, FIERY1, HIGH EXPRESSION OF
OSMOTICALLY RESPONSIVE GENES 2,
ROTUNDA 1, SAL1, suppressors of
PIN1 overexpression 1		 -0.56 0.3 -0.32
85 AT3G14460 LRR and NB-ARC domains-containing disease resistance
protein		 -0.56 0.31 -0.29
86 AT5G26920 Cam-binding protein 60-like G Cam-binding protein 60-like G -0.56 0.31 -0.31
87 AT4G30440 UDP-D-glucuronate 4-epimerase 1 UDP-D-glucuronate 4-epimerase 1 -0.56 0.31 -0.33
88 AT1G06150 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 EMBRYO DEFECTIVE 1444 0.56 0.35 -0.31
89 AT2G22500 uncoupling protein 5 PLANT UNCOUPLING MITOCHONDRIAL
PROTEIN 5, DICARBOXYLATE CARRIER
1, uncoupling protein 5		 -0.56 0.3 -0.32
90 AT1G72410 COP1-interacting protein-related 0.55 0.32 -0.31
91 AT4G29100 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.55 0.34 -0.29
92 AT1G69980 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 15 growth
stages; Has 30 Blast hits to 30 proteins in 12 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.31 -0.33
93 AT3G45640 mitogen-activated protein kinase 3 ATMAPK3, mitogen-activated protein
kinase 3, mitogen-activated
protein kinase 3		 -0.55 0.33 -0.33
94 AT1G41870 transposable element gene 0.55 0.31 -0.3
95 AT1G25540 phytochrome and flowering time regulatory protein (PFT1) mediator 25, PHYTOCHROME AND
FLOWERING TIME 1		 0.55 0.33 -0.32
96 AT2G05180 cytochrome P450, family 705, subfamily A, polypeptide 6 cytochrome P450, family 705,
subfamily A, polypeptide 6		 0.55 0.33 -0.32
97 AT1G05960 ARM repeat superfamily protein 0.55 0.29 -0.29