AGICode | AT4G17240 |
Description | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; Has 1142 Blast hits to 1055 proteins in 252 species: Archae - 22; Bacteria - 318; Metazoa - 248; Fungi - 96; Plants - 59; Viruses - 3; Other Eukaryotes - 396 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G17240 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; Has 1142 Blast hits to 1055 proteins in 252 species: Archae - 22; Bacteria - 318; Metazoa - 248; Fungi - 96; Plants - 59; Viruses - 3; Other Eukaryotes - 396 (source: NCBI BLink). |
1 | 0.3 | -0.29 | |||
2 | AT5G13730 | sigma factor 4 | sigma factor 4, SIGD | 0.86 | 0.32 | -0.33 | ||
3 | AT2G28950 | expansin A6 | ARABIDOPSIS THALIANA TEXPANSIN 6, expansin A6, ATHEXP ALPHA 1.8, expansin A6 |
0.85 | 0.31 | -0.33 | ||
4 | AT3G32930 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 57 Blast hits to 57 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.85 | 0.31 | -0.32 | |||
5 | AT4G14870 | secE/sec61-gamma protein transport protein | SECE1 | 0.84 | 0.31 | -0.32 | ||
6 | AT5G01920 | Protein kinase superfamily protein | State transition 8 | 0.83 | 0.3 | -0.31 | ||
7 | AT3G53800 | Fes1B | Fes1B | 0.83 | 0.32 | -0.32 | ||
8 | AT1G55360 | Protein of Unknown Function (DUF239) | 0.83 | 0.31 | -0.32 | |||
9 | AT4G30690 | Translation initiation factor 3 protein | 0.82 | 0.32 | -0.32 | |||
10 | AT3G14760 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.82 | 0.31 | -0.31 | |||
11 | AT3G47780 | ABC2 homolog 6 | ATP-binding cassette A7, A. THALIANA ABC2 HOMOLOG 6, ABC2 homolog 6 |
-0.82 | 0.32 | -0.3 | ||
12 | AT1G10410 | Protein of unknown function (DUF1336) | -0.82 | 0.3 | -0.33 | |||
13 | AT1G23400 | RNA-binding CRS1 / YhbY (CRM) domain-containing protein | ARABIDOPSIS THALIANA HOMOLOG OF MAIZE CAF2, CAF2 |
0.82 | 0.3 | -0.33 | ||
14 | AT3G23760 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: transferases, transferring glycosyl groups (TAIR:AT4G14100.1); Has 108 Blast hits to 104 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). |
0.81 | 0.32 | -0.32 | |||
15 | AT1G76100 | plastocyanin 1 | plastocyanin 1 | 0.81 | 0.31 | -0.33 | ||
16 | AT3G29240 | Protein of unknown function (DUF179) | 0.81 | 0.33 | -0.31 | |||
17 | AT5G44520 | NagB/RpiA/CoA transferase-like superfamily protein | 0.81 | 0.31 | -0.33 | |||
18 | AT4G03150 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.81 | 0.28 | -0.31 | |||
19 | AT2G34620 | Mitochondrial transcription termination factor family protein |
0.81 | 0.31 | -0.31 | |||
20 | AT5G02710 | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0153 (InterPro:IPR005358); Has 240 Blast hits to 240 proteins in 73 species: Archae - 10; Bacteria - 110; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). |
0.81 | 0.31 | -0.29 | |||
21 | AT3G62000 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.8 | 0.32 | -0.31 | |||
22 | AT5G16940 | carbon-sulfur lyases | 0.8 | 0.31 | -0.31 | |||
23 | AT2G35780 | serine carboxypeptidase-like 26 | serine carboxypeptidase-like 26 | 0.8 | 0.33 | -0.3 | ||
24 | AT2G42690 | alpha/beta-Hydrolases superfamily protein | 0.8 | 0.32 | -0.32 | |||
25 | AT4G01870 | tolB protein-related | -0.79 | 0.32 | -0.31 | |||
26 | AT2G24150 | heptahelical protein 3 | heptahelical protein 3 | 0.79 | 0.32 | -0.31 | ||
27 | AT3G53230 | ATPase, AAA-type, CDC48 protein | -0.79 | 0.32 | -0.3 | |||
28 | AT1G79720 | Eukaryotic aspartyl protease family protein | 0.79 | 0.31 | -0.32 | |||
29 | AT5G19170 | Protein of Unknown Function (DUF239) | 0.79 | 0.32 | -0.3 | |||
30 | AT3G11750 | Dihydroneopterin aldolase | FOLB1 | 0.78 | 0.33 | -0.33 | ||
31 | AT1G17170 | glutathione S-transferase TAU 24 | glutathione S-transferase TAU 24, Arabidopsis thaliana Glutathione S-transferase (class tau) 24, glutathione S-transferase TAU 24 |
-0.78 | 0.32 | -0.31 | ||
32 | AT1G49730 | Protein kinase superfamily protein | 0.78 | 0.32 | -0.31 | |||
33 | AT4G39900 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.78 | 0.29 | -0.31 | |||
34 | AT1G17850 | Rhodanese/Cell cycle control phosphatase superfamily protein |
0.78 | 0.31 | -0.3 | |||
35 | AT3G22880 | DNA repair (Rad51) family protein | ARABIDOPSIS HOMOLOG OF LILY MESSAGES INDUCED AT MEIOSIS 15, ARABIDOPSIS THALIANA DISRUPTION OF MEIOTIC CONTROL 1, DISRUPTION OF MEIOTIC CONTROL 1 |
0.78 | 0.33 | -0.33 | ||
36 | AT2G31190 | Protein of unknown function, DUF647 | ROOT UV-B SENSITIVE 2, weak auxin response1 |
0.77 | 0.33 | -0.32 | ||
37 | AT1G48480 | receptor-like kinase 1 | receptor-like kinase 1 | 0.77 | 0.32 | -0.3 | ||
38 | AT3G51620 | PAP/OAS1 substrate-binding domain superfamily | -0.77 | 0.3 | -0.32 | |||
39 | AT4G35760 | NAD(P)H dehydrogenase (quinone)s | 0.77 | 0.33 | -0.31 | |||
40 | AT3G52155 | Phosphoglycerate mutase family protein | 0.77 | 0.31 | -0.3 | |||
41 | AT3G11090 | LOB domain-containing protein 21 | LOB domain-containing protein 21 | 0.77 | 0.31 | -0.31 | ||
42 | AT2G22890 | Kua-ubiquitin conjugating enzyme hybrid localisation domain | 0.77 | 0.33 | -0.3 | |||
43 | AT3G55260 | beta-hexosaminidase 1 | ATHEX2, beta-hexosaminidase 1 | 0.76 | 0.32 | -0.33 | ||
44 | AT1G23360 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
MENG | 0.76 | 0.33 | -0.3 | ||
45 | AT4G31805 | WRKY family transcription factor | 0.76 | 0.31 | -0.32 | |||
46 | AT3G47560 | alpha/beta-Hydrolases superfamily protein | 0.76 | 0.31 | -0.31 | |||
47 | AT2G24100 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G30780.1); Has 101 Blast hits to 101 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). |
ALTERED SEED GERMINATION 1 | -0.76 | 0.31 | -0.29 | ||
48 | AT4G34160 | CYCLIN D3;1 | CYCD3, CYCLIN D3;1 | 0.76 | 0.3 | -0.33 | ||
49 | AT5G04530 | 3-ketoacyl-CoA synthase 19 | 3-ketoacyl-CoA synthase 19 | 0.76 | 0.34 | -0.32 | ||
50 | AT5G57440 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
GLYCEROL-3-PHOSPHATASE 2, GS1 | 0.76 | 0.31 | -0.29 | ||
51 | AT3G06140 | RING/U-box superfamily protein | 0.76 | 0.32 | -0.31 | |||
52 | AT4G14580 | CBL-interacting protein kinase 4 | CBL-interacting protein kinase 4, SNF1-RELATED PROTEIN KINASE 3.3 |
-0.75 | 0.33 | -0.33 | ||
53 | AT3G13330 | proteasome activating protein 200 | proteasome activating protein 200 | -0.74 | 0.3 | -0.34 | ||
54 | AT4G12120 | Sec1/munc18-like (SM) proteins superfamily | ATSEC1B, SEC1B | -0.74 | 0.32 | -0.32 | ||
55 | AT5G35980 | yeast YAK1-related gene 1 | yeast YAK1-related gene 1 | -0.72 | 0.3 | -0.31 | ||
56 | AT1G55500 | evolutionarily conserved C-terminal region 4 | evolutionarily conserved C-terminal region 4 |
-0.72 | 0.31 | -0.31 | ||
57 | AT1G08620 | Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein |
PKDM7D | -0.71 | 0.32 | -0.29 | ||
58 | AT1G78340 | glutathione S-transferase TAU 22 | glutathione S-transferase TAU 22, glutathione S-transferase TAU 22 |
-0.71 | 0.32 | -0.3 | ||
59 | AT5G35980 | yeast YAK1-related gene 1 | yeast YAK1-related gene 1 | -0.7 | 0.3 | -0.31 | ||
60 | AT5G20830 | sucrose synthase 1 | ASUS1, atsus1, sucrose synthase 1 | -0.7 | 0.3 | -0.34 | ||
61 | AT1G11390 | Protein kinase superfamily protein | -0.7 | 0.31 | -0.31 | |||
62 | AT1G61140 | SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related |
embryo sac development arrest 16 | -0.7 | 0.29 | -0.32 | ||
63 | AT5G23720 | dual specificity protein phosphatase family protein | PROPYZAMIDE-HYPERSENSITIVE 1 | -0.7 | 0.3 | -0.33 | ||
64 | AT1G06780 | galacturonosyltransferase 6 | galacturonosyltransferase 6 | -0.69 | 0.29 | -0.32 | ||
65 | AT2G41850 | polygalacturonase abscission zone A. thaliana | ARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE 2, polygalacturonase abscission zone A. thaliana |
-0.69 | 0.33 | -0.31 | ||
66 | AT2G30110 | ubiquitin-activating enzyme 1 | ubiquitin-activating enzyme 1, MODIFIER OF SNC1 5, ubiquitin-activating enzyme 1 |
-0.69 | 0.3 | -0.3 | ||
67 | AT1G10170 | NF-X-like 1 | NF-X-like 1, NF-X-like 1 | -0.69 | 0.32 | -0.33 | ||
68 | AT3G59820 | LETM1-like protein | -0.68 | 0.33 | -0.32 | |||
69 | AT4G33430 | BRI1-associated receptor kinase | ATBAK1, SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 3, BRI1-associated receptor kinase, ELONGATED, RECEPTOR KINASES LIKE SERK 10, SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 3 |
-0.68 | 0.34 | -0.32 | ||
70 | AT5G55040 | DNA-binding bromodomain-containing protein | -0.68 | 0.31 | -0.33 | |||
71 | AT1G23230 | CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629); Has 187 Blast hits to 184 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink). |
-0.68 | 0.32 | -0.3 | |||
72 | AT2G28320 | Pleckstrin homology (PH) and lipid-binding START domains-containing protein |
-0.68 | 0.34 | -0.31 | |||
73 | AT5G11100 | Calcium-dependent lipid-binding (CaLB domain) family protein |
ATSYTD, NTMC2T2.2, NTMC2TYPE2.2, synaptotagmin 4, SYTD |
-0.68 | 0.29 | -0.31 | ||
74 | AT5G49480 | Ca2+-binding protein 1 | Ca2+-binding protein 1, Ca2+-binding protein 1 |
-0.68 | 0.32 | -0.33 | ||
75 | AT3G25585 | aminoalcoholphosphotransferase | aminoalcoholphosphotransferase, ATAAPT2 |
-0.67 | 0.34 | -0.31 | ||
76 | AT4G04860 | DERLIN-2.2 | DERLIN-2.2 | -0.66 | 0.31 | -0.32 | ||
77 | AT2G41000 | Chaperone DnaJ-domain superfamily protein | -0.66 | 0.32 | -0.34 | |||
78 | AT5G13530 | protein kinases;ubiquitin-protein ligases | KEEP ON GOING | -0.66 | 0.32 | -0.31 | ||
79 | AT2G39300 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55060.1); Has 46416 Blast hits to 28308 proteins in 1743 species: Archae - 734; Bacteria - 4822; Metazoa - 24446; Fungi - 3539; Plants - 2267; Viruses - 163; Other Eukaryotes - 10445 (source: NCBI BLink). |
-0.66 | 0.35 | -0.32 | |||
80 | AT5G08560 | transducin family protein / WD-40 repeat family protein | -0.66 | 0.31 | -0.29 | |||
81 | AT4G02710 | Kinase interacting (KIP1-like) family protein | -0.66 | 0.32 | -0.29 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
82 | C0198 | Phosphatidylethanolamine-34:0 | - | - | - | -0.79 | 0.48 | -0.45 |