AGICode | AT4G17310 |
Description | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47455.7); Has 164 Blast hits to 164 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G17310 | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47455.7); Has 164 Blast hits to 164 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
1 | 0.32 | -0.33 | |||
2 | AT1G43860 | sequence-specific DNA binding transcription factors | 0.79 | 0.32 | -0.32 | |||
3 | AT1G31280 | Argonaute family protein | argonaute 2 | 0.78 | 0.34 | -0.32 | ||
4 | AT3G26890 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41110.1); Has 393 Blast hits to 383 proteins in 134 species: Archae - 0; Bacteria - 61; Metazoa - 171; Fungi - 74; Plants - 80; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). |
-0.78 | 0.31 | -0.32 | |||
5 | AT2G47970 | Nuclear pore localisation protein NPL4 | 0.77 | 0.31 | -0.33 | |||
6 | AT5G22060 | DNAJ homologue 2 | ARABIDOPSIS THALIANA DNAJ HOMOLOGUE 2, DNAJ homologue 2 |
0.77 | 0.32 | -0.31 | ||
7 | AT4G01320 | Peptidase family M48 family protein | ATSTE24, STE24 | 0.76 | 0.32 | -0.3 | ||
8 | AT5G58020 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF602 (InterPro:IPR006735); Has 385 Blast hits to 385 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 117; Plants - 50; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink). |
0.76 | 0.34 | -0.29 | |||
9 | AT1G09920 | TRAF-type zinc finger-related | 0.75 | 0.31 | -0.34 | |||
10 | AT4G11220 | VIRB2-interacting protein 2 | VIRB2-interacting protein 2, Reticulan like protein B2 |
0.74 | 0.32 | -0.32 | ||
11 | AT3G07540 | Actin-binding FH2 (formin homology 2) family protein | -0.74 | 0.32 | -0.32 | |||
12 | AT5G03340 | ATPase, AAA-type, CDC48 protein | 0.73 | 0.31 | -0.32 | |||
13 | AT3G01150 | polypyrimidine tract-binding protein 1 | POLYPYRIMIDINE TRACT-BINDING PROTEIN 1, polypyrimidine tract-binding protein 1 |
0.73 | 0.32 | -0.31 | ||
14 | AT5G19000 | BTB-POZ and MATH domain 1 | BTB-POZ AND MATH DOMAIN 1, BTB-POZ and MATH domain 1 |
0.73 | 0.3 | -0.32 | ||
15 | AT3G09350 | Fes1A | Fes1A | 0.73 | 0.33 | -0.31 | ||
16 | AT4G25280 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.72 | 0.35 | -0.31 | |||
17 | AT4G28600 | no pollen germination related 2 | no pollen germination related 2 | 0.72 | 0.3 | -0.31 | ||
18 | AT5G52200 | phosphoprotein phosphatase inhibitors | AtI-2, inhibitor-2 | 0.72 | 0.29 | -0.31 | ||
19 | AT1G64740 | alpha-1 tubulin | alpha-1 tubulin | 0.72 | 0.31 | -0.29 | ||
20 | AT5G42780 | homeobox protein 27 | homeobox protein 27, homeobox protein 27, ZINC FINGER HOMEODOMAIN 13 |
-0.72 | 0.32 | -0.33 | ||
21 | AT4G24550 | Clathrin adaptor complexes medium subunit family protein | 0.71 | 0.34 | -0.32 | |||
22 | AT4G23040 | Ubiquitin-like superfamily protein | 0.71 | 0.31 | -0.32 | |||
23 | AT1G33230 | TMPIT-like protein | 0.71 | 0.32 | -0.32 | |||
24 | AT4G34120 | Cystathionine beta-synthase (CBS) family protein | CBS domain containing protein 2, CYSTATHIONE [BETA]-SYNTHASE DOMAIN-CONTAINING PROTEIN 1, LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 1 |
0.71 | 0.3 | -0.33 | ||
25 | AT5G10780 | CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP017207, transmembrane protein 85 (InterPro:IPR016687), Protein of unknown function DUF1077 (InterPro:IPR009445); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.7 | 0.31 | -0.32 | |||
26 | AT2G20580 | 26S proteasome regulatory subunit S2 1A | 26S PROTEASOME REGULATORY SUBUNIT S2 1A, 26S proteasome regulatory subunit S2 1A |
0.69 | 0.32 | -0.3 | ||
27 | AT3G13520 | arabinogalactan protein 12 | arabinogalactan protein 12, ATAGP12 |
0.69 | 0.33 | -0.31 | ||
28 | AT4G25880 | pumilio 6 | pumilio 6, pumilio 6 | -0.69 | 0.31 | -0.33 | ||
29 | AT4G04210 | plant UBX domain containing protein 4 | plant UBX domain containing protein 4 |
0.69 | 0.32 | -0.33 | ||
30 | AT5G66200 | armadillo repeat only 2 | armadillo repeat only 2 | 0.69 | 0.34 | -0.31 | ||
31 | AT1G11900 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.69 | 0.3 | -0.31 | |||
32 | AT4G12790 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.69 | 0.32 | -0.32 | |||
33 | AT5G25130 | cytochrome P450, family 71, subfamily B, polypeptide 12 | cytochrome P450, family 71, subfamily B, polypeptide 12 |
-0.69 | 0.35 | -0.32 | ||
34 | AT5G54310 | ARF-GAP domain 5 | ARF-GAP domain 5, NEVERSHED | 0.68 | 0.32 | -0.3 | ||
35 | AT4G29040 | regulatory particle AAA-ATPase 2A | regulatory particle AAA-ATPase 2A | 0.68 | 0.32 | -0.31 | ||
36 | AT2G34250 | SecY protein transport family protein | 0.68 | 0.32 | -0.33 | |||
37 | AT3G46290 | hercules receptor kinase 1 | hercules receptor kinase 1 | 0.68 | 0.31 | -0.3 | ||
38 | AT3G43510 | transposable element gene | 0.68 | 0.3 | -0.33 | |||
39 | AT5G20180 | Ribosomal protein L36 | 0.68 | 0.32 | -0.33 | |||
40 | AT1G69640 | sphingoid base hydroxylase 1 | sphingoid base hydroxylase 1 | 0.68 | 0.3 | -0.31 | ||
41 | AT3G17360 | phragmoplast orienting kinesin 1 | phragmoplast orienting kinesin 1 | -0.67 | 0.31 | -0.34 | ||
42 | AT1G25520 | Uncharacterized protein family (UPF0016) | 0.67 | 0.33 | -0.33 | |||
43 | AT5G67420 | LOB domain-containing protein 37 | ASYMMETRIC LEAVES2-LIKE 39, LOB domain-containing protein 37 |
-0.67 | 0.3 | -0.33 | ||
44 | AT2G17970 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.67 | 0.33 | -0.3 | |||
45 | AT1G04260 | CAMV movement protein interacting protein 7 | CAMV movement protein interacting protein 7, CAMV MOVEMENT PROTEIN INTERACTING PROTEIN 7, PRENYLATED RAB ACCEPTOR 1.D |
0.67 | 0.33 | -0.31 | ||
46 | AT5G59480 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
0.67 | 0.31 | -0.32 | |||
47 | AT3G10740 | alpha-L-arabinofuranosidase 1 | ALPHA-L-ARABINOFURANOSIDASE, ALPHA-L-ARABINOFURANOSIDASE 1, alpha-L-arabinofuranosidase 1, ARABIDOPSIS THALIANA ALPHA-L-ARABINOFURANOSIDASE 1 |
-0.67 | 0.31 | -0.34 | ||
48 | AT3G14200 | Chaperone DnaJ-domain superfamily protein | 0.66 | 0.31 | -0.31 | |||
49 | AT3G51050 | FG-GAP repeat-containing protein | 0.66 | 0.32 | -0.29 | |||
50 | AT4G14690 | Chlorophyll A-B binding family protein | EARLY LIGHT-INDUCIBLE PROTEIN 2 | 0.66 | 0.3 | -0.32 | ||
51 | AT5G35320 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.66 | 0.34 | -0.3 | |||
52 | AT2G07490 | transposable element gene | -0.66 | 0.31 | -0.31 | |||
53 | AT5G23170 | Protein kinase superfamily protein | -0.66 | 0.3 | -0.33 | |||
54 | AT5G53000 | 2A phosphatase associated protein of 46 kD | 2A phosphatase associated protein of 46 kD |
0.66 | 0.33 | -0.33 | ||
55 | AT5G40470 | RNI-like superfamily protein | -0.65 | 0.31 | -0.3 | |||
56 | AT1G23000 | Heavy metal transport/detoxification superfamily protein | -0.65 | 0.34 | -0.32 | |||
57 | AT2G45100 | Cyclin/Brf1-like TBP-binding protein | -0.65 | 0.34 | -0.32 | |||
58 | AT1G11130 | Leucine-rich repeat protein kinase family protein | SCRAMBLED, STRUBBELIG-RECEPTOR FAMILY 9, STRUBBELIG |
-0.64 | 0.33 | -0.3 | ||
59 | AT5G22700 | F-box/RNI-like/FBD-like domains-containing protein | -0.64 | 0.32 | -0.31 | |||
60 | AT2G25270 | unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G12400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
-0.64 | 0.32 | -0.31 | |||
61 | AT1G80790 | XH/XS domain-containing protein | factor of DNA methylation 5 | -0.64 | 0.32 | -0.32 | ||
62 | AT4G23660 | polyprenyltransferase 1 | polyprenyltransferase 1, polyprenyltransferase 1 |
-0.63 | 0.33 | -0.3 | ||
63 | AT2G35170 | Histone H3 K4-specific methyltransferase SET7/9 family protein |
-0.63 | 0.31 | -0.32 | |||
64 | AT4G13450 | Adenine nucleotide alpha hydrolases-like superfamily protein |
-0.62 | 0.3 | -0.33 | |||
65 | AT1G29200 | O-fucosyltransferase family protein | -0.61 | 0.31 | -0.31 | |||
66 | AT1G10210 | mitogen-activated protein kinase 1 | mitogen-activated protein kinase 1, mitogen-activated protein kinase 1 |
-0.6 | 0.3 | -0.32 | ||
67 | AT4G14180 | putative recombination initiation defect 1 | putative recombination initiation defect 1, putative recombination initiation defect 1 |
-0.6 | 0.31 | -0.33 | ||
68 | AT2G32360 | Ubiquitin-like superfamily protein | -0.6 | 0.32 | -0.3 | |||
69 | AT5G11780 | unknown protein; Has 37 Blast hits to 37 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.6 | 0.3 | -0.32 | |||
70 | AT1G12730 | GPI transamidase subunit PIG-U | -0.6 | 0.31 | -0.31 | |||
71 | AT4G10640 | IQ-domain 16 | IQ-domain 16 | -0.59 | 0.3 | -0.3 | ||
72 | AT2G39570 | ACT domain-containing protein | ACT domain repeats 9 | -0.59 | 0.3 | -0.32 | ||
73 | AT1G74170 | receptor like protein 13 | receptor like protein 13, receptor like protein 13 |
-0.58 | 0.29 | -0.32 | ||
74 | AT1G14970 | O-fucosyltransferase family protein | -0.58 | 0.31 | -0.32 | |||
75 | AT2G16090 | RING/U-box superfamily protein | ARIADNE 2, ARABIDOPSIS ARIADNE 2 | -0.57 | 0.31 | -0.31 |