AT4G17510 : ubiquitin C-terminal hydrolase 3
Query Information
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AGICode AT4G17510
Description ubiquitin C-terminal hydrolase 3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G17510 ubiquitin C-terminal hydrolase 3 ubiquitin C-terminal hydrolase 3 1 0.31 -0.31
2 AT5G53310 myosin heavy chain-related 0.77 0.32 -0.33
3 AT5G50460 secE/sec61-gamma protein transport protein 0.77 0.33 -0.31
4 AT4G22310 Uncharacterised protein family (UPF0041) 0.76 0.3 -0.31
5 AT5G54750 Transport protein particle (TRAPP) component 0.76 0.32 -0.3
6 AT2G42210 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 ATOEP16-3, OEP16-3 0.75 0.31 -0.32
7 AT5G10980 Histone superfamily protein 0.73 0.33 -0.32
8 AT2G17380 associated protein 19 associated protein 19 0.73 0.32 -0.32
9 AT2G45640 SIN3 associated polypeptide P18 SIN3 ASSOCIATED POLYPEPTIDE 18,
SIN3 associated polypeptide P18		 0.73 0.32 -0.29
10 AT1G47830 SNARE-like superfamily protein 0.73 0.32 -0.31
11 AT4G12590 Protein of unknown function DUF106, transmembrane 0.72 0.32 -0.32
12 AT2G37500 arginine biosynthesis protein ArgJ family 0.72 0.3 -0.31
13 AT4G14420 HR-like lesion-inducing protein-related 0.72 0.32 -0.29
14 AT1G28250 unknown protein; Has 22 Blast hits to 22 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.71 0.3 -0.34
15 AT2G45240 methionine aminopeptidase 1A methionine aminopeptidase 1A 0.71 0.29 -0.3
16 AT5G05780 RP non-ATPase subunit 8A ASYMMETRIC LEAVES ENHANCER 3,
ATHMOV34, RP non-ATPase subunit 8A		 0.71 0.3 -0.32
17 AT3G59990 methionine aminopeptidase 2B methionine aminopeptidase 2B 0.71 0.33 -0.3
18 AT5G67590 NADH-ubiquinone oxidoreductase-related FROSTBITE1 0.7 0.31 -0.32
19 AT1G17510 unknown protein; Has 11 Blast hits to 11 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.7 0.32 -0.31
20 AT1G53850 20S proteasome alpha subunit E1 ARABIDOPSIS 20S PROTEASOME ALPHA
SUBUNIT E1, 20S proteasome alpha
subunit E1		 0.69 0.32 -0.32
21 AT3G54170 FKBP12 interacting protein 37 FKBP12 interacting protein 37,
FKBP12 interacting protein 37		 0.69 0.33 -0.3
22 AT5G45590 Ribosomal protein L35 0.68 0.32 -0.33
23 AT3G13550 Ubiquitin-conjugating enzyme family protein CYTOKININ-INSENSITIVE 4,
CONSTITUTIVE PHOTOMORPHOGENIC 10,
EMBRYO DEFECTIVE 144, FUSCA 9		 0.68 0.31 -0.33
24 AT1G30480 D111/G-patch domain-containing protein DNA-DAMAGE-REPAIR/TOLERATION
PROTEIN 111		 0.68 0.33 -0.31
25 AT4G27090 Ribosomal protein L14 0.67 0.3 -0.31
26 AT5G43720 Protein of unknown function (DUF2361) 0.67 0.3 -0.31
27 AT1G54650 Methyltransferase family protein 0.66 0.3 -0.32
28 AT1G34780 APR-like 4 APR-like 4, APR-like 4 0.66 0.31 -0.33
29 AT1G26470 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
regulation of transcription; LOCATED IN: nucleus, H4/H2A
histone acetyltransferase complex; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: CT20 (InterPro:IPR012423); Has 60 Blast
hits to 60 proteins in 27 species: Archae - 0; Bacteria -
0; Metazoa - 26; Fungi - 2; Plants - 30; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.65 0.3 -0.31
30 AT2G03870 Small nuclear ribonucleoprotein family protein EMBRYO DEFECTIVE 2816 0.65 0.32 -0.32
31 AT4G21110 G10 family protein 0.65 0.31 -0.3
32 AT5G63150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF1713, mitochondria
(InterPro:IPR013177); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.64 0.33 -0.3
33 AT3G58630 sequence-specific DNA binding transcription factors 0.64 0.3 -0.3
34 AT1G66680 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 AR401 0.64 0.31 -0.32
35 AT3G60600 vesicle associated protein (AT)VAP, vesicle associated
protein, VAP27,
VAMP/SYNAPTOBREVIN-ASSOCIATED
PROTEIN 27-1		 0.64 0.32 -0.33
36 AT5G49140 Disease resistance protein (TIR-NBS-LRR class) family 0.63 0.31 -0.3
37 AT2G34610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G30190.1); Has 342 Blast hits
to 279 proteins in 74 species: Archae - 0; Bacteria - 7;
Metazoa - 76; Fungi - 18; Plants - 51; Viruses - 0; Other
Eukaryotes - 190 (source: NCBI BLink).		 -0.63 0.31 -0.32
38 AT1G12650 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF947 (InterPro:IPR009292); Has 700 Blast
hits to 631 proteins in 192 species: Archae - 0; Bacteria -
32; Metazoa - 138; Fungi - 168; Plants - 60; Viruses - 0;
Other Eukaryotes - 302 (source: NCBI BLink).		 0.63 0.32 -0.32
39 AT5G58830 Subtilisin-like serine endopeptidase family protein -0.63 0.33 -0.31
40 AT1G63190 Cystatin/monellin superfamily protein -0.62 0.32 -0.31
41 AT3G07640 unknown protein; Has 27 Blast hits to 27 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.62 0.33 -0.32
42 AT5G38830 Cysteinyl-tRNA synthetase, class Ia family protein 0.62 0.32 -0.32
43 AT4G04270 transposable element gene -0.59 0.32 -0.32
44 AT5G35670 IQ-domain 33 IQ-domain 33 -0.58 0.32 -0.3
45 AT2G35110 transcription activators GNARLED, NCK-ASSOCIATED PROTEIN 1,
NAPP		 -0.57 0.32 -0.32
46 AT1G10610 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.56 0.31 -0.32
47 AT2G31780 RING/U-box superfamily protein ARIADNE 11, ARABIDOPSIS ARIADNE 11 -0.56 0.31 -0.32
48 AT4G31950 cytochrome P450, family 82, subfamily C, polypeptide 3 cytochrome P450, family 82,
subfamily C, polypeptide 3		 -0.56 0.31 -0.31
49 AT2G24160 pseudogene, leucine rich repeat protein family, contains
leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; contains some similarity to Cf-4
(Lycopersicon hirsutum) gi|2808683|emb|CAA05268; blastp
match of 37% identity and 8.4e-98 P-value to
GP|2808683|emb|CAA05268.1||AJ002235 Cf-4 {Lycopersicon
hirsutum}		 -0.56 0.32 -0.32
50 AT4G00970 cysteine-rich RLK (RECEPTOR-like protein kinase) 41 cysteine-rich RLK (RECEPTOR-like
protein kinase) 41		 -0.55 0.3 -0.3
51 AT4G09690 Cysteine/Histidine-rich C1 domain family protein -0.54 0.32 -0.3
52 AT1G24000 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.53 0.33 -0.31
53 AT4G08190 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.53 0.3 -0.34
54 AT1G28640 GDSL-like Lipase/Acylhydrolase superfamily protein -0.53 0.31 -0.3
55 AT3G26010 Galactose oxidase/kelch repeat superfamily protein -0.53 0.32 -0.3
56 AT1G17010 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.52 0.32 -0.31
57 AT1G34070 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein
(InterPro:IPR005162); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast
hits to 647 proteins in 29 species: Archae - 0; Bacteria -
0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0;
Other Eukaryotes - 0 (source: NCBI BLink).		 -0.52 0.33 -0.32
58 AT1G49000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: stem; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT3G18560.1); Has
105 Blast hits to 105 proteins in 13 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.52 0.3 -0.32
59 AT5G25120 ytochrome p450, family 71, subfamily B, polypeptide 11 ytochrome p450, family 71,
subfamily B, polypeptide 11		 -0.51 0.32 -0.3
60 AT5G20390 Glycosyl hydrolase superfamily protein -0.51 0.31 -0.31
61 AT3G28540 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.51 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
62 C0143 Maltitol - - starch degradation II -0.62 0.47 -0.43
63 C0148 Methionine D,L-Methionine L-Methionine thiamine biosynthesis II,
S-adenosyl-L-methionine biosynthesis,
S-adenosyl-L-methionine cycle II,
tRNA charging,
methionine degradation II,
ethylene biosynthesis I (plants),
methionine degradation I (to homocysteine),
S-methylmethionine cycle,
methionine salvage pathway,
methionine biosynthesis II,
folate transformations II,
homomethionine biosynthesis,
lipoate biosynthesis and incorporation I,
S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation 		-0.51 0.31 -0.31 C0148