AT4G17140 : -
Query Information
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AGICode AT4G17140
Description pleckstrin homology (PH) domain-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G17140 pleckstrin homology (PH) domain-containing protein 1 0.32 -0.3
2 AT3G01310 Phosphoglycerate mutase-like family protein 0.86 0.3 -0.32
3 AT4G01290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 1744
Blast hits to 1308 proteins in 219 species: Archae - 0;
Bacteria - 241; Metazoa - 793; Fungi - 253; Plants - 108;
Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).		 0.83 0.34 -0.32
4 AT3G50380 Protein of unknown function (DUF1162) 0.81 0.31 -0.32
5 AT2G47410 WD40/YVTN repeat-like-containing domain;Bromodomain 0.81 0.31 -0.33
6 AT1G02080 transcription regulators 0.81 0.32 -0.32
7 AT4G38600 HEAT repeat ;HECT-domain (ubiquitin-transferase) KAKTUS, UBIQUITIN-PROTEIN LIGASE 3 0.8 0.29 -0.32
8 AT2G39340 SAC3/GANP/Nin1/mts3/eIF-3 p25 family AtSAC3A, yeast Sac3 homolog A 0.8 0.32 -0.3
9 AT1G15780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast
hits to 43153 proteins in 1828 species: Archae - 30;
Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants -
7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI
BLink).		 0.79 0.31 -0.32
10 AT4G17140 pleckstrin homology (PH) domain-containing protein 0.77 0.32 -0.33
11 AT1G13910 Leucine-rich repeat (LRR) family protein 0.77 0.33 -0.32
12 AT3G11910 ubiquitin-specific protease 13 AtUBP13, ubiquitin-specific
protease 13		 0.76 0.34 -0.3
13 AT5G35180 Protein of unknown function (DUF1336) 0.76 0.33 -0.32
14 AT2G28290 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHROMATIN REMODELING COMPLEX
SUBUNIT R 3, SPLAYED		 0.75 0.3 -0.31
15 AT1G23230 CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23
(InterPro:IPR021629); Has 187 Blast hits to 184 proteins in
67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi
- 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9
(source: NCBI BLink).		 0.75 0.32 -0.31
16 AT2G46560 transducin family protein / WD-40 repeat family protein 0.75 0.32 -0.33
17 AT2G26890 DNAJ heat shock N-terminal domain-containing protein GRAVITROPISM DEFECTIVE 2,
KATAMARI2		 0.74 0.32 -0.3
18 AT3G07160 glucan synthase-like 10 glucan synthase-like 10, CALS9,
gsl10, glucan synthase-like 10		 0.74 0.32 -0.31
19 AT1G79280 nuclear pore anchor TRANSLOCATED PROMOTER REGION,
nuclear pore anchor		 0.74 0.31 -0.32
20 AT3G14010 CTC-interacting domain 4 CTC-interacting domain 4 0.74 0.33 -0.3
21 AT5G16520 unknown protein; Has 25 Blast hits to 25 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.74 0.32 -0.33
22 AT2G25730 unknown protein; Has 157 Blast hits to 144 proteins in 62
species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi -
0; Plants - 35; Viruses - 0; Other Eukaryotes - 21 (source:
NCBI BLink).		 0.74 0.31 -0.3
23 AT2G23980 cyclic nucleotide-gated channel 6 cyclic nucleotide-gated channel 6,
CYCLIC NUCLEOTIDE GATED CHANNEL 6,
cyclic nucleotide-gated channel 6		 0.74 0.29 -0.33
24 AT2G13370 chromatin remodeling 5 chromatin remodeling 5 0.74 0.33 -0.34
25 AT4G33210 F-box family protein SLOW MOTION 0.73 0.32 -0.32
26 AT1G80930 MIF4G domain-containing protein / MA3 domain-containing
protein		 0.73 0.33 -0.3
27 AT4G02480 AAA-type ATPase family protein 0.72 0.28 -0.32
28 AT1G24706 THO2 AtTHO2, EMBRYO DEFECTIVE 2793,
THO2		 0.72 0.32 -0.31
29 AT1G65580 Endonuclease/exonuclease/phosphatase family protein FRAGILE FIBER3 0.72 0.31 -0.31
30 AT5G24740 Protein of unknown function (DUF1162) 0.72 0.32 -0.3
31 AT3G54670 Structural maintenance of chromosomes (SMC) family protein ATSMC1, STRUCTURAL MAINTENANCE OF
CHROMOSOMES 1, TITAN8		 0.72 0.32 -0.33
32 AT3G27870 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 0.72 0.3 -0.32
33 AT2G47980 sister-chromatid cohesion protein 3 SISTER-CHROMATID COHESION PROTEIN
3, sister-chromatid cohesion
protein 3		 0.72 0.31 -0.33
34 AT3G50370 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 26 plant
structures; EXPRESSED DURING: 15 growth stages; Has 27734
Blast hits to 16708 proteins in 1259 species: Archae - 81;
Bacteria - 3434; Metazoa - 10876; Fungi - 2514; Plants -
987; Viruses - 212; Other Eukaryotes - 9630 (source: NCBI
BLink).		 0.71 0.32 -0.31
35 AT1G05890 RING/U-box superfamily protein ARIADNE 5, ARABIDOPSIS ARIADNE 5 0.71 0.3 -0.31
36 AT1G59930 MADS-box family protein -0.71 0.32 -0.28
37 AT3G06400 chromatin-remodeling protein 11 chromatin-remodeling protein 11 0.71 0.32 -0.32
38 AT3G07274 unknown pseudogene 0.71 0.31 -0.31
39 AT1G74250 DNAJ heat shock N-terminal domain-containing protein 0.71 0.33 -0.33
40 AT1G30490 Homeobox-leucine zipper family protein / lipid-binding
START domain-containing protein		 ATHB9, PHAVOLUTA 0.71 0.31 -0.33
41 AT1G80070 Pre-mRNA-processing-splicing factor EMBRYO DEFECTIVE 14, EMBRYO
DEFECTIVE 177, EMBRYO DEFECTIVE
33, ABNORMAL SUSPENSOR 2		 0.71 0.31 -0.31
42 AT1G27630 cyclin T 1;3 cyclin T 1;3 0.71 0.32 -0.3
43 AT3G09850 D111/G-patch domain-containing protein 0.7 0.31 -0.34
44 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.7 0.3 -0.32
45 AT3G61710 AUTOPHAGY 6 ATATG6, AtBECLIN1, AUTOPHAGY 6,
BECLIN1		 0.7 0.31 -0.31
46 AT2G36810 ARM repeat superfamily protein 0.7 0.31 -0.32
47 AT2G41290 strictosidine synthase-like 2 strictosidine synthase-like 2 -0.7 0.31 -0.3
48 AT5G20380 phosphate transporter 4;5 phosphate transporter 4;5 0.7 0.3 -0.31
49 AT3G46220 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2042 (InterPro:IPR018611); Has 559
Blast hits to 533 proteins in 154 species: Archae - 3;
Bacteria - 32; Metazoa - 305; Fungi - 42; Plants - 50;
Viruses - 3; Other Eukaryotes - 124 (source: NCBI BLink).		 0.7 0.32 -0.29
50 AT5G65620 Zincin-like metalloproteases family protein 0.7 0.31 -0.31
51 AT2G36850 glucan synthase-like 8 GLUCAN SYNTHASE-LIKE 8, ATGSL8,
CHORUS, GSL08, glucan
synthase-like 8		 0.7 0.33 -0.32
52 AT5G58040 homolog of yeast FIP1 [V] homolog of yeast FIP1 [V],
ATFIPS5, homolog of yeast FIP1
[V], FIPS5		 0.7 0.31 -0.33
53 AT4G32640 Sec23/Sec24 protein transport family protein 0.69 0.3 -0.32
54 AT1G05380 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 0.69 0.3 -0.32
55 AT1G04300 TRAF-like superfamily protein 0.69 0.34 -0.3
56 AT3G20270 lipid-binding serum glycoprotein family protein 0.69 0.33 -0.31
57 AT5G23110 Zinc finger, C3HC4 type (RING finger) family protein 0.68 0.3 -0.32
58 AT1G17440 Transcription initiation factor TFIID subunit A CYTOKININ-HYPERSENSITIVE 1,
ENHANCED ETHYLENE RESPONSE 4,
TBP-ASSOCIATED FACTOR 12B		 0.68 0.32 -0.33
59 AT5G56260 Ribonuclease E inhibitor RraA/Dimethylmenaquinone
methyltransferase		 -0.68 0.32 -0.31
60 AT5G61910 DCD (Development and Cell Death) domain protein 0.68 0.31 -0.3
61 AT5G26240 chloride channel D ATCLC-D, chloride channel D 0.68 0.31 -0.31
62 AT2G46930 Pectinacetylesterase family protein -0.68 0.3 -0.3
63 AT1G32750 HAC13 protein (HAC13) GTD1, HISTONE ACETYLTRANSFERASE OF
THE CBP FAMILY 13, HAF01, HISTONE
ACETYLTRANSFERASE OF THE TAFII250
FAMILY 1, TBP-ASSOCIATED FACTOR 1		 0.68 0.31 -0.32
64 AT1G21160 eukaryotic translation initiation factor 2 (eIF-2) family
protein		 0.68 0.31 -0.29
65 AT1G09230 RNA-binding (RRM/RBD/RNP motifs) family protein 0.68 0.31 -0.33
66 AT1G61260 Protein of unknown function (DUF761) -0.68 0.3 -0.34
67 AT5G16280 Tetratricopeptide repeat (TPR)-like superfamily protein 0.68 0.32 -0.33
68 AT1G48410 Stabilizer of iron transporter SufD / Polynucleotidyl
transferase		 ARGONAUTE 1 0.68 0.3 -0.33
69 AT4G20780 calmodulin like 42 calmodulin like 42 -0.67 0.31 -0.3
70 AT1G79950 RAD3-like DNA-binding helicase protein 0.67 0.31 -0.32
71 AT3G19170 presequence protease 1 presequence protease 1, ATZNMP,
presequence protease 1		 0.67 0.33 -0.32
72 AT1G26110 decapping 5 decapping 5 0.67 0.31 -0.33
73 AT4G00450 RNA polymerase II transcription mediators CENTER CITY, CRYPTIC PRECOCIOUS 0.67 0.3 -0.33
74 AT4G32850 nuclear poly(a) polymerase nuclear poly(a) polymerase,
poly(A) polymerase IV		 0.67 0.3 -0.3
75 AT4G32605 Mitochondrial glycoprotein family protein -0.67 0.3 -0.31
76 AT1G71030 MYB-like 2 ARABIDOPSIS MYB-LIKE 2, MYB-like 2 0.67 0.32 -0.29
77 AT4G05420 damaged DNA binding protein 1A damaged DNA binding protein 1A 0.67 0.31 -0.32
78 AT1G77600 ARM repeat superfamily protein 0.67 0.33 -0.32
79 AT1G07410 RAB GTPase homolog A2B ARABIDOPSIS RAB GTPASE HOMOLOG
A2B, RAB GTPase homolog A2B, RAB
GTPASE HOMOLOG A2B, RAB GTPase
homolog A2B		 -0.66 0.3 -0.33
80 AT4G39420 unknown protein; Has 46 Blast hits to 40 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.66 0.31 -0.3
81 AT5G43930 Transducin family protein / WD-40 repeat family protein 0.66 0.29 -0.3
82 AT1G17680 tetratricopeptide repeat (TPR)-containing protein 0.66 0.33 -0.31
83 AT1G24490 OxaA/YidC-like membrane insertion protein ALBINA 4, ARABIDOPSIS THALIANA
ENVELOPE MEMBRANE INTEGRASE		 0.66 0.32 -0.33
84 AT3G21430 DNA binding ALWAYS EARLY 3, ARABIDOPSIS
THALIANA ALWAYS EARLY 3		 0.66 0.34 -0.31
85 AT2G17930 Phosphatidylinositol 3- and 4-kinase family protein with
FAT domain		 0.66 0.3 -0.33
86 AT4G37460 Tetratricopeptide repeat (TPR)-like superfamily protein SUPPRESSOR OF RPS4-RLD 1 0.66 0.3 -0.31
87 AT1G18640 3-phosphoserine phosphatase 3-phosphoserine phosphatase -0.66 0.32 -0.3
88 AT1G32490 RNA helicase family protein EMBRYO DEFECTIVE 2733, ENHANCED
SILENCING PHENOTYPE 3		 0.66 0.32 -0.33
89 AT1G01040 dicer-like 1 ABNORMAL SUSPENSOR 1, DICER-LIKE
1, CARPEL FACTORY, dicer-like 1,
EMBRYO DEFECTIVE 60, EMBRYO
DEFECTIVE 76, SHORT INTEGUMENTS 1,
SUSPENSOR 1		 0.66 0.29 -0.31
90 AT4G01290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; Has 1744
Blast hits to 1308 proteins in 219 species: Archae - 0;
Bacteria - 241; Metazoa - 793; Fungi - 253; Plants - 108;
Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).		 0.66 0.3 -0.32
91 AT5G06600 ubiquitin-specific protease 12 AtUBP12, ubiquitin-specific
protease 12		 0.66 0.29 -0.31
92 AT1G55325 RNA polymerase II transcription mediators GRAND CENTRAL, MACCHI-BOU 2 0.65 0.32 -0.33
93 AT4G32620 Enhancer of polycomb-like transcription factor protein 0.65 0.3 -0.31
94 AT3G12810 SNF2 domain-containing protein / helicase domain-containing
protein		 chr13, PHOTOPERIOD-INDEPENDENT
EARLY FLOWERING 1, SRCAP		 0.65 0.31 -0.33
95 AT4G33240 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion
binding;1-phosphatidylinositol-3-phosphate 5-kinases		 FORMS APLOID AND BINUCLEATE CELLS
1A		 0.65 0.33 -0.32
96 AT5G18230 transcription regulator NOT2/NOT3/NOT5 family protein 0.65 0.33 -0.31
97 AT5G66590 CAP (Cysteine-rich secretory proteins, Antigen 5, and
Pathogenesis-related 1 protein) superfamily protein		 -0.65 0.32 -0.32
98 AT3G20720 unknown protein; Has 184 Blast hits to 181 proteins in 66
species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi -
0; Plants - 40; Viruses - 0; Other Eukaryotes - 5 (source:
NCBI BLink).		 0.65 0.34 -0.32
99 AT2G41520 Heat shock protein DnaJ with tetratricopeptide repeat tetratricopeptide repeat 15 0.65 0.32 -0.31
100 AT1G03060 Beige/BEACH domain ;WD domain, G-beta repeat protein SPIRRIG 0.65 0.29 -0.33
101 AT4G34040 RING/U-box superfamily protein 0.65 0.32 -0.31
102 AT5G48120 ARM repeat superfamily protein 0.65 0.3 -0.32
103 AT3G26560 ATP-dependent RNA helicase, putative 0.64 0.32 -0.3
104 AT3G63070 Tudor/PWWP/MBT domain-containing protein 0.64 0.32 -0.32
105 AT3G08850 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1B, RAPTOR1, RAPTOR1B 0.64 0.29 -0.31
106 AT4G00630 K+ efflux antiporter 2 ATKEA2, K+ efflux antiporter 2 0.64 0.31 -0.28
107 AT2G03150 ATP/GTP-binding protein family embryo defective 1579 0.64 0.31 -0.32
108 AT5G07580 Integrase-type DNA-binding superfamily protein -0.64 0.33 -0.31
109 AT5G42220 Ubiquitin-like superfamily protein 0.64 0.31 -0.32
110 AT3G59770 sacI homology domain-containing protein / WW
domain-containing protein		 ARABIDOPSIS THALIANA SUPPRESSOR OF
ACTIN 9, SUPPRESSOR OF ACTIN 9		 0.64 0.31 -0.31
111 AT5G04460 RING/U-box superfamily protein 0.64 0.31 -0.31
112 AT5G46190 RNA-binding KH domain-containing protein 0.64 0.34 -0.32
113 AT1G06410 trehalose-phosphatase/synthase 7 trehalose-phosphatase/synthase 7,
ATTPSA, TREHALOSE -6-PHOSPHATASE
SYNTHASE S7,
trehalose-phosphatase/synthase 7		 0.64 0.3 -0.31
114 AT1G15750 Transducin family protein / WD-40 repeat family protein TOPLESS, WUS-INTERACTING PROTEIN 1 0.64 0.31 -0.33
115 AT5G06610 Protein of unknown function (DUF620) -0.63 0.32 -0.32
116 AT5G28630 glycine-rich protein -0.63 0.32 -0.3
117 AT5G05840 Protein of unknown function (DUF620) -0.63 0.32 -0.34
118 AT1G67940 non-intrinsic ABC protein 3 ATP-binding cassette I17,
non-intrinsic ABC protein 3,
AtSTAR1, ARABIDOPSIS THALIANA
NON-INTRINSIC ABC PROTEIN 3,
non-intrinsic ABC protein 3		 -0.63 0.32 -0.3
119 AT2G20480 unknown protein; Has 19 Blast hits to 19 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.63 0.33 -0.32
120 AT5G49630 amino acid permease 6 amino acid permease 6 -0.63 0.32 -0.3
121 AT5G24580 Heavy metal transport/detoxification superfamily protein -0.63 0.32 -0.31
122 AT1G61170 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 19 plant
structures; EXPRESSED DURING: 12 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G11125.1); Has 54 Blast hits to 54 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0;
Plants - 34; Viruses - 1; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.63 0.35 -0.31
123 AT1G50720 Stigma-specific Stig1 family protein -0.62 0.29 -0.33
124 AT4G31020 alpha/beta-Hydrolases superfamily protein -0.62 0.33 -0.31
125 AT4G22140 PHD finger family protein / bromo-adjacent homology (BAH)
domain-containing protein		 EARLY BOLTING IN SHORT DAYS -0.62 0.3 -0.33
126 AT2G24600 Ankyrin repeat family protein -0.61 0.31 -0.34
127 AT1G20050 C-8,7 sterol isomerase HYDRA1 -0.61 0.29 -0.32
128 AT1G07020 unknown protein; Has 39 Blast hits to 39 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 3;
Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.61 0.32 -0.33
129 AT2G07505 zinc ion binding -0.6 0.31 -0.32
130 AT5G60950 COBRA-like protein 5 precursor COBRA-like protein 5 precursor -0.59 0.33 -0.34
131 AT1G68330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G48780.1); Has 155 Blast hits
to 147 proteins in 23 species: Archae - 0; Bacteria - 0;
Metazoa - 19; Fungi - 3; Plants - 126; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 -0.59 0.35 -0.32
132 AT2G26240 Transmembrane proteins 14C -0.59 0.31 -0.31
133 AT4G14630 germin-like protein 9 germin-like protein 9 -0.59 0.32 -0.33
134 AT4G14410 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 basic Helix-Loop-Helix 104 -0.59 0.31 -0.3
135 AT5G59410 Rab5-interacting family protein -0.59 0.29 -0.31
136 AT5G25140 cytochrome P450, family 71, subfamily B, polypeptide 13 cytochrome P450, family 71,
subfamily B, polypeptide 13		 -0.58 0.32 -0.3
137 AT1G55910 zinc transporter 11 precursor zinc transporter 11 precursor -0.58 0.32 -0.3
138 AT2G31110 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 40 -0.58 0.34 -0.34
139 AT3G32060 transposable element gene -0.58 0.31 -0.33
140 AT4G23730 Galactose mutarotase-like superfamily protein -0.57 0.34 -0.32
141 AT2G41180 VQ motif-containing protein sigma factor binding protein 2 -0.57 0.33 -0.33
142 AT4G17980 NAC domain containing protein 71 NAC domain containing protein 71,
NAC domain containing protein 71		 -0.57 0.31 -0.29
143 AT3G12040 DNA-3-methyladenine glycosylase (MAG) -0.57 0.33 -0.31
144 AT3G07600 Heavy metal transport/detoxification superfamily protein -0.57 0.32 -0.3
145 AT5G04210 CCCH-type zinc fingerfamily protein with RNA-binding domain -0.57 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
146 C0258 Tryptophan amide (NH3+) D,L-Tryptophan amide (NH3+) - - 0.72 0.46 -0.42