AT4G16280 : FCA
Query Information
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AGICode AT4G16280
Description RNA binding;abscisic acid binding
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G16280 RNA binding;abscisic acid binding FCA 1 0.31 -0.31
2 AT3G46960 RNA helicase, ATP-dependent, SK12/DOB1 protein 0.79 0.32 -0.31
3 AT5G24740 Protein of unknown function (DUF1162) 0.76 0.34 -0.31
4 AT2G15610 Protein of unknown function (DUF1685) 0.76 0.32 -0.34
5 AT2G48160 Tudor/PWWP/MBT domain-containing protein 0.73 0.32 -0.31
6 AT3G03370 BEST Arabidopsis thaliana protein match is: DegP protease 7
(TAIR:AT3G03380.1); Has 55 Blast hits to 55 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.72 0.29 -0.33
7 AT1G05380 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 0.71 0.3 -0.32
8 AT1G79950 RAD3-like DNA-binding helicase protein 0.71 0.33 -0.32
9 AT4G31160 DDB1-CUL4 associated factor 1 DDB1-CUL4 associated factor 1 0.71 0.31 -0.32
10 AT1G64790 ILITYHIA ILITYHIA 0.71 0.29 -0.33
11 AT5G28590 DNA-binding family protein 0.7 0.34 -0.32
12 AT5G20360 Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
/ tetratricopeptide repeat (TPR)-containing protein		 Phox3 0.7 0.33 -0.32
13 AT3G21430 DNA binding ALWAYS EARLY 3, ARABIDOPSIS
THALIANA ALWAYS EARLY 3		 0.7 0.29 -0.32
14 AT3G06250 FAR1-related sequence 7 FAR1-related sequence 7 0.7 0.32 -0.32
15 AT1G21650 Preprotein translocase SecA family protein SECA2 0.7 0.32 -0.34
16 AT3G45630 RNA binding (RRM/RBD/RNP motifs) family protein 0.69 0.3 -0.32
17 AT1G44910 pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A,
pre-mRNA-processing protein 40A		 0.69 0.31 -0.33
18 AT2G38650 galacturonosyltransferase 7 galacturonosyltransferase 7, LIKE
GLYCOSYL TRANSFERASE 7		 0.69 0.33 -0.3
19 AT1G09230 RNA-binding (RRM/RBD/RNP motifs) family protein 0.69 0.32 -0.32
20 AT5G09370 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.69 0.32 -0.28
21 AT3G10220 tubulin folding cofactor B EMBRYO DEFECTIVE 2804 -0.69 0.31 -0.31
22 AT1G80930 MIF4G domain-containing protein / MA3 domain-containing
protein		 0.69 0.31 -0.3
23 AT5G42400 SET domain protein 25 ARABIDOPSIS TRITHORAX-RELATED7,
SET domain protein 25		 0.68 0.3 -0.3
24 AT1G45160 Protein kinase superfamily protein 0.68 0.28 -0.32
25 AT3G12840 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.68 0.3 -0.32
26 AT1G34210 somatic embryogenesis receptor-like kinase 2 ATSERK2, somatic embryogenesis
receptor-like kinase 2		 0.67 0.3 -0.29
27 AT2G40720 Tetratricopeptide repeat (TPR)-like superfamily protein 0.67 0.33 -0.29
28 AT3G11460 Pentatricopeptide repeat (PPR) superfamily protein 0.67 0.33 -0.32
29 AT1G47310 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; Has 45 Blast hits to 45
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.67 0.32 -0.31
30 AT3G44210 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43870.1); Has 15 Blast hits
to 15 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.31 -0.31
31 AT1G03190 RAD3-like DNA-binding helicase protein ARABIDOPSIS THALIANA XERODERMA
PIGMENTOSUM GROUP D, ULTRAVIOLET
HYPERSENSITIVE 6		 0.67 0.31 -0.31
32 AT3G04740 RNA polymerase II transcription mediators ARABIDOPSIS MEDIATOR COMPONENTS
14, MEDIATOR COMPONENTS 14,
STRUWWELPETER		 0.67 0.31 -0.3
33 AT5G63135 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.67 0.3 -0.31
34 AT4G33870 Peroxidase superfamily protein 0.67 0.29 -0.31
35 AT1G10320 Zinc finger C-x8-C-x5-C-x3-H type family protein 0.67 0.31 -0.3
36 AT1G19290 Pentatricopeptide repeat (PPR) superfamily protein 0.67 0.32 -0.31
37 AT3G51120 DNA binding;zinc ion binding;nucleic acid binding;nucleic
acid binding		 0.66 0.33 -0.34
38 AT2G01130 DEA(D/H)-box RNA helicase family protein 0.66 0.31 -0.31
39 AT5G15700 DNA/RNA polymerases superfamily protein 0.66 0.31 -0.3
40 AT3G12810 SNF2 domain-containing protein / helicase domain-containing
protein		 chr13, PHOTOPERIOD-INDEPENDENT
EARLY FLOWERING 1, SRCAP		 0.66 0.31 -0.31
41 AT3G50590 Transducin/WD40 repeat-like superfamily protein 0.66 0.3 -0.3
42 AT4G38760 Protein of unknown function (DUF3414) 0.66 0.32 -0.31
43 AT2G44360 unknown protein; Has 23 Blast hits to 23 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.29 -0.32
44 AT5G37370 PRP38 family protein ATSRL1 0.66 0.31 -0.34
45 AT1G77300 histone methyltransferases(H3-K4 specific);histone
methyltransferases(H3-K36 specific)		 ASH1 HOMOLOG 2, CAROTENOID
CHLOROPLAST REGULATORY1, EARLY
FLOWERING IN SHORT DAYS, LAZARUS
2, SET DOMAIN GROUP 8		 0.66 0.32 -0.31
46 AT5G48120 ARM repeat superfamily protein 0.66 0.32 -0.31
47 AT2G10610 transposable element gene 0.66 0.31 -0.3
48 AT3G63180 TIC-like TICKLE, TIC-like 0.65 0.31 -0.3
49 AT4G16444 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
CHD5-like protein (InterPro:IPR007514); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.65 0.3 -0.3
50 AT3G20720 unknown protein; Has 184 Blast hits to 181 proteins in 66
species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi -
0; Plants - 40; Viruses - 0; Other Eukaryotes - 5 (source:
NCBI BLink).		 0.65 0.32 -0.31
51 AT1G32810 RING/FYVE/PHD zinc finger superfamily protein 0.65 0.31 -0.31
52 AT5G19630 alpha/beta-Hydrolases superfamily protein -0.65 0.33 -0.31
53 AT5G24320 Transducin/WD40 repeat-like superfamily protein 0.65 0.3 -0.29
54 AT5G53800 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.64 0.33 -0.31
55 AT4G34500 Protein kinase superfamily protein -0.64 0.31 -0.32
56 AT2G04830 Protein of unknown function (DUF295) 0.64 0.29 -0.31
57 AT4G28370 RING/U-box superfamily protein 0.64 0.32 -0.32
58 AT2G07360 SH3 domain-containing protein 0.64 0.28 -0.3
59 AT1G26110 decapping 5 decapping 5 0.64 0.32 -0.31
60 AT3G10810 zinc finger (C3HC4-type RING finger) family protein 0.64 0.31 -0.3
61 AT3G13020 hAT transposon superfamily protein 0.64 0.29 -0.31
62 AT4G40050 Protein of unknown function (DUF3550/UPF0682) 0.64 0.3 -0.31
63 AT3G15120 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.64 0.34 -0.31
64 AT5G24010 Protein kinase superfamily protein 0.64 0.33 -0.31
65 AT1G11260 sugar transporter 1 SUGAR TRANSPORTER 1, sugar
transporter 1		 -0.64 0.33 -0.35
66 AT5G17030 UDP-glucosyl transferase 78D3 UDP-glucosyl transferase 78D3 0.64 0.3 -0.32
67 AT3G45810 ferric reductase-like transmembrane component family
protein		 0.64 0.33 -0.3
68 AT1G64570 Homeodomain-like superfamily protein DUO POLLEN 3 0.64 0.29 -0.34
69 AT4G11950 Protein of unknown function (DUF1191) 0.64 0.33 -0.33
70 AT3G50370 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 26 plant
structures; EXPRESSED DURING: 15 growth stages; Has 27734
Blast hits to 16708 proteins in 1259 species: Archae - 81;
Bacteria - 3434; Metazoa - 10876; Fungi - 2514; Plants -
987; Viruses - 212; Other Eukaryotes - 9630 (source: NCBI
BLink).		 0.63 0.32 -0.31
71 AT1G69170 Squamosa promoter-binding protein-like (SBP domain)
transcription factor family protein		 0.63 0.31 -0.35
72 AT3G24315 Sec20 family protein AtSec20 -0.63 0.32 -0.3
73 AT5G03320 Protein kinase superfamily protein -0.63 0.3 -0.3
74 AT4G38200 SEC7-like guanine nucleotide exchange family protein 0.63 0.3 -0.32
75 AT4G17330 G2484-1 protein G2484-1 protein, G2484-1 protein 0.63 0.32 -0.31
76 AT2G41520 Heat shock protein DnaJ with tetratricopeptide repeat tetratricopeptide repeat 15 0.63 0.32 -0.28
77 AT5G44070 phytochelatin synthase 1 (PCS1) ARA8, ARABIDOPSIS THALIANA
PHYTOCHELATIN SYNTHASE 1, CADMIUM
SENSITIVE 1, PHYTOCHELATIN
SYNTHASE 1		 -0.63 0.33 -0.33
78 AT3G15710 Peptidase S24/S26A/S26B/S26C family protein -0.63 0.32 -0.32
79 AT3G03510 Phototropic-responsive NPH3 family protein 0.62 0.33 -0.31
80 AT2G31780 RING/U-box superfamily protein ARIADNE 11, ARABIDOPSIS ARIADNE 11 0.62 0.32 -0.32
81 AT3G46920 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 0.62 0.32 -0.3
82 AT3G24340 chromatin remodeling 40 chromatin remodeling 40 0.62 0.31 -0.31
83 AT5G47520 RAB GTPase homolog A5A RAB GTPase homolog A5A, RAB GTPase
homolog A5A		 -0.62 0.31 -0.3
84 AT5G61140 U5 small nuclear ribonucleoprotein helicase 0.62 0.35 -0.3
85 AT2G25660 embryo defective 2410 embryo defective 2410 0.62 0.3 -0.29
86 AT3G61390 RING/U-box superfamily protein 0.62 0.32 -0.31
87 AT3G08700 ubiquitin-conjugating enzyme 12 ubiquitin-conjugating enzyme 12 0.62 0.34 -0.33
88 AT3G20020 protein arginine methyltransferase 6 ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 6,
protein arginine methyltransferase
6		 0.62 0.32 -0.3
89 AT1G67230 little nuclei1 CROWDED NUCLEI 1, LITTLE NUCLEI1 0.62 0.31 -0.3
90 AT2G39340 SAC3/GANP/Nin1/mts3/eIF-3 p25 family AtSAC3A, yeast Sac3 homolog A 0.62 0.3 -0.33
91 AT1G51880 root hair specific 6 root hair specific 6 -0.62 0.3 -0.32
92 AT1G58250 Golgi-body localisation protein domain ;RNA pol II promoter
Fmp27 protein domain		 SABRE 0.62 0.34 -0.31
93 AT1G20180 Protein of unknown function (DUF677) 0.62 0.31 -0.34
94 AT5G58450 Tetratricopeptide repeat (TPR)-like superfamily protein 0.62 0.29 -0.32
95 AT3G48490 unknown protein; Has 16 Blast hits to 16 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 1;
Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.62 0.33 -0.31
96 AT1G49040 stomatal cytokinesis defective / SCD1 protein (SCD1) STOMATAL CYTOKINESIS-DEFECTIVE 1 0.62 0.31 -0.33
97 AT1G48330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G17580.1); Has 40 Blast hits
to 40 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.34 -0.3
98 AT1G80420 BRCT domain-containing DNA repair protein ATXRCC1 -0.61 0.33 -0.28
99 AT3G04800 translocase inner membrane subunit 23-3 translocase inner membrane subunit
23-3, translocase inner membrane
subunit 23-3		 -0.61 0.32 -0.3
100 AT1G05205 unknown protein; Has 44 Blast hits to 44 proteins in 16
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.32 -0.3
101 AT5G07040 RING/U-box superfamily protein -0.6 0.32 -0.31
102 AT1G60350 NAC domain containing protein 24 NAC domain containing protein 24,
NAC domain containing protein 24		 -0.59 0.3 -0.32
103 AT2G43350 glutathione peroxidase 3 glutathione peroxidase 3,
glutathione peroxidase 3		 -0.59 0.31 -0.31
104 AT2G46000 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Mesoderm development candidate 2 (InterPro:IPR019330); Has
31 Blast hits to 31 proteins in 13 species: Archae - 0;
Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.31 -0.31
105 AT2G38870 Serine protease inhibitor, potato inhibitor I-type family
protein		 -0.58 0.32 -0.31
106 AT2G20620 Protein of unknown function (DUF626) -0.58 0.29 -0.3
107 AT1G35210 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF740 (InterPro:IPR008004);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G22470.1); Has 83 Blast hits to 83 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 81; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.57 0.3 -0.32
108 AT1G13540 Protein of unknown function (DUF1262) -0.57 0.33 -0.32
109 AT2G40750 WRKY DNA-binding protein 54 WRKY DNA-BINDING PROTEIN 54, WRKY
DNA-binding protein 54		 -0.57 0.34 -0.33
110 AT3G18170 Glycosyltransferase family 61 protein -0.57 0.33 -0.33
111 AT1G29990 prefoldin 6 prefoldin 6 -0.56 0.33 -0.31
112 AT1G14750 Cyclin family protein SOLO DANCERS -0.56 0.31 -0.29
113 AT1G26860 transposable element gene -0.56 0.3 -0.33
114 AT3G09735 S1FA-like DNA-binding protein -0.56 0.31 -0.32
115 AT3G21830 SKP1-like 8 SKP1-like 8, SKP1-like 8 -0.56 0.32 -0.31
116 AT5G33200 transposable element gene -0.55 0.33 -0.31
117 AT1G55660 FBD, F-box and Leucine Rich Repeat domains containing
protein		 -0.55 0.31 -0.32
118 AT5G66640 DA1-related protein 3 DA1-related protein 3 -0.55 0.32 -0.33
119 AT2G04550 indole-3-butyric acid response 5 DUAL SPECIFICITY PROTEIN
PHOSPHATASE 1E, indole-3-butyric
acid response 5		 -0.54 0.32 -0.32
120 AT2G32560 F-box family protein -0.54 0.31 -0.31
121 AT2G37070 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G53320.1); Has 1323 Blast hits
to 775 proteins in 176 species: Archae - 0; Bacteria - 113;
Metazoa - 351; Fungi - 175; Plants - 115; Viruses - 13;
Other Eukaryotes - 556 (source: NCBI BLink).		 -0.54 0.3 -0.3
122 AT4G38480 Transducin/WD40 repeat-like superfamily protein -0.54 0.29 -0.33
123 AT1G55570 SKU5 similar 12 SKU5 similar 12 -0.53 0.3 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
124 C0002 α-Lipoic acid (+/-)-α-Lipoic acid Lipoate cofactor of fatty acid biosynthesis 0.63 0.46 -0.46 C0002
125 C0089 Fortunellin - - - 0.63 0.43 -0.42
126 C0024 2-(Anilinomethyl)pyrrolidine (S)-(+)-2-(anilinomethyl)pyrrolidine - - 0.62 0.42 -0.42