AT4G16390 : suppressor of variegation 7
Query Information
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AGICode AT4G16390
Description pentatricopeptide (PPR) repeat-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G16390 pentatricopeptide (PPR) repeat-containing protein suppressor of variegation 7 1 0.34 -0.32
2 AT1G06190 Rho termination factor 0.92 0.3 -0.32
3 AT4G26370 antitermination NusB domain-containing protein 0.92 0.31 -0.32
4 AT2G39670 Radical SAM superfamily protein 0.92 0.31 -0.32
5 AT5G14660 peptide deformylase 1B ATDEF2, DEF2, peptide deformylase
1B		 0.91 0.3 -0.33
6 AT5G07900 Mitochondrial transcription termination factor family
protein		 0.91 0.32 -0.34
7 AT1G56050 GTP-binding protein-related 0.9 0.33 -0.32
8 AT2G33430 differentiation and greening-like 1 DIFFERENTIATION AND GREENING-LIKE,
differentiation and greening-like
1		 0.9 0.31 -0.29
9 AT4G37510 Ribonuclease III family protein 0.9 0.34 -0.31
10 AT5G63050 embryo defective 2759 embryo defective 2759 0.9 0.35 -0.3
11 AT2G37220 RNA-binding (RRM/RBD/RNP motifs) family protein 0.9 0.3 -0.3
12 AT3G48730 glutamate-1-semialdehyde 2,1-aminomutase 2 glutamate-1-semialdehyde
2,1-aminomutase 2		 0.9 0.32 -0.31
13 AT4G20360 RAB GTPase homolog E1B ATRAB8D, RAB GTPase homolog E1B,
RAB GTPase homolog E1B		 0.89 0.33 -0.31
14 AT3G12930 Lojap-related protein 0.89 0.31 -0.3
15 AT2G43030 Ribosomal protein L3 family protein 0.89 0.3 -0.29
16 AT4G18480 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 CHLORINA 42, CHLORINA 42, CHL11,
CHLI-1, CHLI1		 0.89 0.32 -0.32
17 AT5G11450 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein		 PsbP domain protein 5 0.89 0.3 -0.32
18 AT5G46580 pentatricopeptide (PPR) repeat-containing protein 0.89 0.31 -0.31
19 AT4G34290 SWIB/MDM2 domain superfamily protein 0.88 0.33 -0.32
20 AT4G39960 Molecular chaperone Hsp40/DnaJ family protein 0.88 0.33 -0.33
21 AT1G55490 chaperonin 60 beta chaperonin 60 beta,
chaperonin-60beta1, LESION
INITIATION 1		 0.88 0.33 -0.3
22 AT3G04650 FAD/NAD(P)-binding oxidoreductase family protein 0.88 0.32 -0.33
23 AT2G14880 SWIB/MDM2 domain superfamily protein 0.88 0.32 -0.3
24 AT1G51570 Calcium-dependent lipid-binding (CaLB domain) plant
phosphoribosyltransferase family protein		 0.88 0.3 -0.31
25 AT4G02990 Mitochondrial transcription termination factor family
protein		 BELAYA SMERT, RUGOSA 2 0.88 0.33 -0.32
26 AT1G02150 Tetratricopeptide repeat (TPR)-like superfamily protein 0.88 0.33 -0.33
27 AT5G55580 Mitochondrial transcription termination factor family
protein		 0.88 0.33 -0.3
28 AT2G44640 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion,
chloroplast, plasma membrane, plastid, chloroplast
envelope; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3769 (InterPro:IPR022244);
BEST Arabidopsis thaliana protein match is: pigment
defective 320 (TAIR:AT3G06960.1); Has 49 Blast hits to 48
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 0.87 0.3 -0.31
29 AT2G47840 Uncharacterised conserved protein ycf60 translocon at the inner envelope
membrane of chloroplasts 20-II,
translocon at the inner envelope
membrane of chloroplasts 20-II		 0.87 0.32 -0.33
30 AT3G53460 chloroplast RNA-binding protein 29 chloroplast RNA-binding protein 29 0.87 0.32 -0.3
31 AT3G06980 DEA(D/H)-box RNA helicase family protein 0.87 0.32 -0.29
32 AT4G31850 proton gradient regulation 3 proton gradient regulation 3 0.87 0.31 -0.33
33 AT4G36390 Methylthiotransferase 0.86 0.31 -0.28
34 AT5G45930 magnesium chelatase i2 CHL I2, CHLI-2, magnesium
chelatase i2		 0.86 0.31 -0.33
35 AT5G19750 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein 0.86 0.29 -0.31
36 AT5G59500 protein C-terminal S-isoprenylcysteine carboxyl
O-methyltransferases		 0.86 0.31 -0.34
37 AT2G03050 Mitochondrial transcription termination factor family
protein		 EMBRYO DEFECTIVE 93, SINGLET
OXYGEN-LINKED DEATH ACTIVATOR 10		 0.86 0.31 -0.33
38 AT2G28000 chaperonin-60alpha CHLOROPLAST CHAPERONIN 60ALPHA,
chaperonin-60alpha,
chaperonin-60alpha1, SCHLEPPERLESS		 0.86 0.29 -0.33
39 AT2G41950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, plant-type cell wall; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 53
Blast hits to 53 proteins in 24 species: Archae - 0;
Bacteria - 27; Metazoa - 0; Fungi - 0; Plants - 26; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 0.86 0.33 -0.32
40 AT5G63570 glutamate-1-semialdehyde-2,1-aminomutase glutamate-1-semialdehyde-2,1-amino
mutase		 0.86 0.31 -0.31
41 AT1G09900 Pentatricopeptide repeat (PPR-like) superfamily protein 0.86 0.32 -0.33
42 AT5G01590 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has 60
Blast hits to 59 proteins in 31 species: Archae - 0;
Bacteria - 20; Metazoa - 1; Fungi - 2; Plants - 33; Viruses
- 0; Other Eukaryotes - 4 (source: NCBI BLink).		 0.86 0.31 -0.33
43 AT3G25480 Rhodanese/Cell cycle control phosphatase superfamily
protein		 0.86 0.3 -0.31
44 AT1G10510 RNI-like superfamily protein embryo defective 2004 0.86 0.33 -0.32
45 AT2G30200 catalytics;transferases;[acyl-carrier-protein]
S-malonyltransferases;binding		 EMBRYO DEFECTIVE 3147 0.85 0.31 -0.3
46 AT1G48460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast envelope; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G63040.1); Has 60 Blast hits to 60 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.85 0.3 -0.32
47 AT5G17840 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.85 0.3 -0.32
48 AT3G13470 TCP-1/cpn60 chaperonin family protein chaperonin-60beta2 0.85 0.33 -0.32
49 AT3G47650 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.84 0.32 -0.33
50 AT1G70200 RNA-binding (RRM/RBD/RNP motifs) family protein 0.84 0.28 -0.29
51 AT1G74850 plastid transcriptionally active 2 PIGMENT DEFECTIVE 343, plastid
transcriptionally active 2		 0.84 0.32 -0.32
52 AT3G61770 Acid phosphatase/vanadium-dependent haloperoxidase-related
protein		 0.84 0.34 -0.3
53 AT2G21860 violaxanthin de-epoxidase-related 0.84 0.31 -0.3
54 AT3G46740 translocon at the outer envelope membrane of chloroplasts
75-III		 MODIFIER OF ARG1 1, translocon at
the outer envelope membrane of
chloroplasts 75-III		 0.84 0.32 -0.3
55 AT3G56330 N2,N2-dimethylguanosine tRNA methyltransferase 0.84 0.31 -0.32
56 AT1G13270 methionine aminopeptidase 1B METHIONINE AMINOPEPTIDASE 1B,
methionine aminopeptidase 1B		 0.83 0.31 -0.33
57 AT5G42480 Chaperone DnaJ-domain superfamily protein ACCUMULATION AND REPLICATION OF
CHLOROPLASTS 6		 0.83 0.32 -0.32
58 AT4G30720 FAD/NAD(P)-binding oxidoreductase family protein PIGMENT DEFECTIVE 327 0.83 0.31 -0.31
59 AT3G04550 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G28500.1); Has 110 Blast hits to 110 proteins in
51 species: Archae - 0; Bacteria - 67; Metazoa - 1; Fungi -
0; Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.83 0.32 -0.3
60 AT3G19220 protein disulfide isomerases SHI-YO-U MEANS COTYLEDON IN
JAPANESE, SNOWY COTYLEDON 2		 0.83 0.3 -0.32
61 AT3G57560 N-acetyl-l-glutamate kinase N-acetyl-l-glutamate kinase 0.83 0.31 -0.3
62 AT5G49030 tRNA synthetase class I (I, L, M and V) family protein ovule abortion 2 0.83 0.32 -0.32
63 AT3G54090 fructokinase-like 1 fructokinase-like 1 0.83 0.3 -0.36
64 AT3G22960 Pyruvate kinase family protein PKP-ALPHA, PLASTIDIAL PYRUVATE
KINASE 1		 0.83 0.32 -0.29
65 AT4G30580 Phospholipid/glycerol acyltransferase family protein ATS2, EMBRYO DEFECTIVE 1995,
lysophosphatidic acid
acyltransferase 1		 0.83 0.3 -0.32
66 AT1G18090 5'-3' exonuclease family protein 0.83 0.31 -0.29
67 AT1G26730 EXS (ERD1/XPR1/SYG1) family protein -0.76 0.33 -0.3
68 AT5G47050 SBP (S-ribonuclease binding protein) family protein -0.74 0.31 -0.31
69 AT1G29760 Putative adipose-regulatory protein (Seipin) -0.73 0.32 -0.33
70 AT3G12760 CONTAINS InterPro DOMAIN/s: Defective-in-cullin neddylation
protein (InterPro:IPR014764), Protein of unknown function
DUF298 (InterPro:IPR005176), UBA-like (InterPro:IPR009060);
BEST Arabidopsis thaliana protein match is: Domain of
unknown function (DUF298) (TAIR:AT1G15860.2); Has 857 Blast
hits to 855 proteins in 202 species: Archae - 0; Bacteria -
0; Metazoa - 482; Fungi - 154; Plants - 139; Viruses - 0;
Other Eukaryotes - 82 (source: NCBI BLink).		 -0.72 0.3 -0.33
71 AT5G59490 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.72 0.33 -0.34
72 AT2G46150 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.72 0.34 -0.33
73 AT4G26270 phosphofructokinase 3 phosphofructokinase 3 -0.71 0.3 -0.32
74 AT5G18170 glutamate dehydrogenase 1 glutamate dehydrogenase 1 -0.7 0.32 -0.32
75 AT1G24440 RING/U-box superfamily protein -0.7 0.32 -0.31
76 AT1G70790 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.7 0.33 -0.32
77 AT1G26440 ureide permease 5 ureide permease 5, UPS5, ureide
permease 5		 -0.69 0.32 -0.31
78 AT4G37290 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; LOCATED IN: endomembrane
system; EXPRESSED IN: cotyledon, hypocotyl, leaf; EXPRESSED
DURING: LP.04 four leaves visible; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G23270.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.69 0.3 -0.3
79 AT3G49350 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.68 0.32 -0.31
80 AT1G55850 cellulose synthase like E1 ATCSLE1, cellulose synthase like
E1		 -0.68 0.31 -0.32
81 AT3G62920 unknown protein; Has 25 Blast hits to 25 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.68 0.34 -0.3
82 AT3G47340 glutamine-dependent asparagine synthase 1 glutamine-dependent asparagine
synthase 1, ARABIDOPSIS THALIANA
GLUTAMINE-DEPENDENT ASPARAGINE
SYNTHASE 1, DARK INDUCIBLE 6		 -0.67 0.31 -0.31
83 AT2G27310 F-box family protein -0.67 0.32 -0.3
84 AT2G15230 lipase 1 lipase 1, lipase 1 -0.66 0.3 -0.33
85 AT1G05577 Domain of unknown function (DUF966) -0.66 0.33 -0.32