AT4G15890 : -
Query Information
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AGICode AT4G15890
Description binding
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G15890 binding 1 0.3 -0.31
2 AT3G10690 DNA GYRASE A DNA GYRASE A 0.73 0.3 -0.3
3 AT2G21800 essential meiotic endonuclease 1A essential meiotic endonuclease 1A,
EME1A, essential meiotic
endonuclease 1A		 0.71 0.33 -0.34
4 AT3G19740 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.71 0.32 -0.32
5 AT3G56870 unknown protein; Has 204 Blast hits to 201 proteins in 58
species: Archae - 0; Bacteria - 10; Metazoa - 72; Fungi -
8; Plants - 41; Viruses - 0; Other Eukaryotes - 73 (source:
NCBI BLink).		 0.7 0.33 -0.32
6 AT1G73020 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF590 (InterPro:IPR007632); Has 1198
Blast hits to 1128 proteins in 154 species: Archae - 0;
Bacteria - 0; Metazoa - 809; Fungi - 158; Plants - 25;
Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink).		 0.7 0.31 -0.33
7 AT5G35420 transposable element gene 0.69 0.29 -0.31
8 AT4G22970 homolog of separase homolog of separase, homolog of
separase, SEPARASE, RADIALLY
SWOLLEN 4		 0.69 0.33 -0.31
9 AT1G27880 DEAD/DEAH box RNA helicase family protein 0.69 0.34 -0.31
10 AT1G56090 Tetratricopeptide repeat (TPR)-like superfamily protein -0.69 0.31 -0.31
11 AT4G35370 Transducin/WD40 repeat-like superfamily protein 0.68 0.3 -0.31
12 AT3G49000 RNA polymerase III subunit RPC82 family protein 0.67 0.32 -0.32
13 AT3G49600 ubiquitin-specific protease 26 ATUBP26, SUP32, ubiquitin-specific
protease 26		 0.67 0.3 -0.31
14 AT4G23950 Galactose-binding protein 0.67 0.31 -0.31
15 AT1G03610 Protein of unknown function (DUF789) -0.67 0.34 -0.31
16 AT5G18820 TCP-1/cpn60 chaperonin family protein chaperonin-60alpha2, embryo
defective 3007		 0.67 0.3 -0.31
17 AT5G17510 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G03460.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.66 0.31 -0.31
18 AT1G17460 TRF-like 3 TRF-like 3 0.66 0.32 -0.32
19 AT3G03270 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.65 0.3 -0.33
20 AT4G21070 breast cancer susceptibility1 ARABIDOPSIS THALIANA BREAST CANCER
SUSCEPTIBILITY1, breast cancer
susceptibility1		 0.65 0.33 -0.31
21 AT2G30380 Plant protein of unknown function (DUF641) 0.65 0.31 -0.32
22 AT2G46260 BTB/POZ/Kelch-associated protein -0.64 0.32 -0.32
23 AT1G15280 CASC3/Barentsz eIF4AIII binding 0.64 0.3 -0.32
24 AT3G01400 ARM repeat superfamily protein -0.64 0.31 -0.3
25 AT1G09320 agenet domain-containing protein 0.63 0.32 -0.3
26 AT1G38340 transposable element gene 0.63 0.31 -0.34
27 AT4G14170 Pentatricopeptide repeat (PPR) superfamily protein 0.63 0.32 -0.33
28 AT2G18750 Calmodulin-binding protein -0.63 0.32 -0.32
29 AT1G05610 ADP-glucose pyrophosphorylase small subunit 2 ADP-glucose pyrophosphorylase
small subunit 2		 -0.63 0.31 -0.32
30 AT3G24315 Sec20 family protein AtSec20 -0.62 0.31 -0.3
31 AT5G64180 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.62 0.31 -0.33
32 AT3G24320 MUTL protein homolog 1 ATMSH1, CHLOROPLAST MUTATOR, CHM1,
MUTL protein homolog 1		 0.62 0.31 -0.31
33 AT5G62520 similar to RCD one 5 similar to RCD one 5 -0.62 0.32 -0.3
34 AT5G40520 unknown protein; Has 3679 Blast hits to 2474 proteins in
390 species: Archae - 10; Bacteria - 571; Metazoa - 1012;
Fungi - 528; Plants - 214; Viruses - 74; Other Eukaryotes -
1270 (source: NCBI BLink).		 0.62 0.32 -0.32
35 AT3G20770 Ethylene insensitive 3 family protein AtEIN3, ETHYLENE-INSENSITIVE3 -0.61 0.33 -0.31
36 AT2G25070 Protein phosphatase 2C family protein -0.61 0.35 -0.33
37 AT1G33055 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: anaerobic respiration; LOCATED IN:
endomembrane system; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 6 growth stages; Has 20 Blast hits to 20
proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.61 0.33 -0.32
38 AT4G17960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G46620.1); Has 46 Blast hits
to 45 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.61 0.3 -0.33
39 AT2G07630 transposable element gene 0.61 0.31 -0.31
40 AT5G01480 Cysteine/Histidine-rich C1 domain family protein 0.61 0.29 -0.33
41 AT1G35330 RING/U-box superfamily protein -0.61 0.34 -0.32
42 AT2G27120 DNA polymerase epsilon catalytic subunit POL2B, TILTED 2 0.61 0.31 -0.33
43 AT5G61650 CYCLIN P4;2 CYCP4, CYCLIN P4;2 -0.61 0.33 -0.32
44 AT1G08130 DNA ligase 1 DNA ligase 1, DNA ligase 1 0.61 0.31 -0.36
45 AT4G11400 ARID/BRIGHT DNA-binding domain;ELM2 domain protein -0.61 0.3 -0.31
46 AT3G48530 SNF1-related protein kinase regulatory subunit gamma 1 SNF1-related protein kinase
regulatory subunit gamma 1		 -0.6 0.31 -0.32
47 AT3G61690 nucleotidyltransferases 0.6 0.32 -0.32
48 AT1G75490 Integrase-type DNA-binding superfamily protein -0.6 0.32 -0.3
49 AT3G04880 DNA-damage-repair/toleration protein (DRT102) DNA-DAMAGE-REPAIR/TOLERATION 2 -0.6 0.32 -0.32
50 AT2G35510 similar to RCD one 1 similar to RCD one 1 0.6 0.3 -0.31
51 AT1G71420 Tetratricopeptide repeat (TPR)-like superfamily protein 0.59 0.33 -0.32
52 AT5G62310 AGC (cAMP-dependent, cGMP-dependent and protein kinase C)
kinase family protein		 INCOMPLETE ROOT HAIR ELONGATION -0.59 0.3 -0.34
53 AT4G27450 Aluminium induced protein with YGL and LRDR motifs -0.59 0.32 -0.31
54 AT2G02670 pseudogene, hypothetical protein 0.59 0.32 -0.3
55 AT5G55670 RNA-binding (RRM/RBD/RNP motifs) family protein 0.59 0.32 -0.33
56 AT2G04370 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.59 0.33 -0.31
57 AT5G58787 RING/U-box superfamily protein -0.59 0.32 -0.32
58 AT2G27470 nuclear factor Y, subunit B11 nuclear factor Y, subunit B11 0.59 0.33 -0.31
59 AT1G74740 calcium-dependent protein kinase 30 ATCPK30, CALCIUM-DEPENDENT PROTEIN
KINASE 1A, calcium-dependent
protein kinase 30		 -0.59 0.33 -0.31
60 AT1G33350 Pentatricopeptide repeat (PPR) superfamily protein 0.59 0.32 -0.34
61 AT5G07700 myb domain protein 76 myb domain protein 76, myb domain
protein 76		 0.59 0.32 -0.33
62 AT2G20150 unknown protein; Has 5 Blast hits to 5 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.59 0.32 -0.32
63 AT2G28270 Cysteine/Histidine-rich C1 domain family protein -0.58 0.29 -0.32
64 AT1G08960 cation exchanger 11 CATION EXCHANGER 11, Arabidopsis
thaliana cation calcium exchanger
5, cation exchanger 11, cation
calcium exchanger 5		 0.58 0.32 -0.33
65 AT1G43700 VIRE2-interacting protein 1 sulphate utilization efficiency 3,
VIRE2-interacting protein 1		 -0.58 0.33 -0.32
66 AT5G23640 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.58 0.33 -0.3
67 AT1G13050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G26350.1); Has 538 Blast hits
to 510 proteins in 88 species: Archae - 0; Bacteria - 23;
Metazoa - 81; Fungi - 36; Plants - 361; Viruses - 8; Other
Eukaryotes - 29 (source: NCBI BLink).		 0.58 0.32 -0.3
68 AT1G64330 myosin heavy chain-related 0.58 0.3 -0.31
69 AT3G23330 Tetratricopeptide repeat (TPR)-like superfamily protein 0.58 0.34 -0.31
70 AT5G65440 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G24610.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.58 0.32 -0.34
71 AT1G48640 Transmembrane amino acid transporter family protein -0.58 0.32 -0.32
72 AT1G73380 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1308 (InterPro:IPR010733); Has 162
Blast hits to 160 proteins in 67 species: Archae - 0;
Bacteria - 2; Metazoa - 120; Fungi - 0; Plants - 34;
Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).		 -0.58 0.32 -0.32
73 AT4G38340 Plant regulator RWP-RK family protein 0.58 0.3 -0.31
74 AT2G43330 inositol transporter 1 INOSITOL TRANSPORTER 1, inositol
transporter 1		 -0.58 0.32 -0.3
75 AT1G64280 regulatory protein (NPR1) ARABIDOPSIS NONEXPRESSER OF PR
GENES 1, NON-INDUCIBLE IMMUNITY 1,
NONEXPRESSER OF PR GENES 1,
SALICYLIC ACID INSENSITIVE 1		 -0.57 0.3 -0.33
76 AT5G01940 eukaryotic translation initiation factor 2B family protein
/ eIF-2B family protein		 -0.57 0.32 -0.32
77 AT2G19510 LOB domain-containing protein 8 LOB domain-containing protein 8 -0.57 0.29 -0.32
78 AT3G26790 AP2/B3-like transcriptional factor family protein FUSCA 3 -0.57 0.3 -0.33
79 AT1G32950 Subtilase family protein -0.57 0.32 -0.3
80 AT1G02660 alpha/beta-Hydrolases superfamily protein -0.56 0.33 -0.29
81 AT4G12040 A20/AN1-like zinc finger family protein AtSAP7, stress-associated protein
7		 -0.56 0.33 -0.3
82 AT1G33910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.56 0.29 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
83 C0088 FAD - FAD cytokinins degradation,
lysine degradation II,
valine degradation I,
isoleucine degradation I,
flavin biosynthesis I (bacteria and plants) 		-0.59 0.44 -0.46 C0088