AGICode | AT4G15890 |
Description | binding |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G15890 | binding | 1 | 0.3 | -0.31 | |||
2 | AT3G10690 | DNA GYRASE A | DNA GYRASE A | 0.73 | 0.3 | -0.3 | ||
3 | AT2G21800 | essential meiotic endonuclease 1A | essential meiotic endonuclease 1A, EME1A, essential meiotic endonuclease 1A |
0.71 | 0.33 | -0.34 | ||
4 | AT3G19740 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.71 | 0.32 | -0.32 | |||
5 | AT3G56870 | unknown protein; Has 204 Blast hits to 201 proteins in 58 species: Archae - 0; Bacteria - 10; Metazoa - 72; Fungi - 8; Plants - 41; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink). |
0.7 | 0.33 | -0.32 | |||
6 | AT1G73020 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF590 (InterPro:IPR007632); Has 1198 Blast hits to 1128 proteins in 154 species: Archae - 0; Bacteria - 0; Metazoa - 809; Fungi - 158; Plants - 25; Viruses - 0; Other Eukaryotes - 206 (source: NCBI BLink). |
0.7 | 0.31 | -0.33 | |||
7 | AT5G35420 | transposable element gene | 0.69 | 0.29 | -0.31 | |||
8 | AT4G22970 | homolog of separase | homolog of separase, homolog of separase, SEPARASE, RADIALLY SWOLLEN 4 |
0.69 | 0.33 | -0.31 | ||
9 | AT1G27880 | DEAD/DEAH box RNA helicase family protein | 0.69 | 0.34 | -0.31 | |||
10 | AT1G56090 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.69 | 0.31 | -0.31 | |||
11 | AT4G35370 | Transducin/WD40 repeat-like superfamily protein | 0.68 | 0.3 | -0.31 | |||
12 | AT3G49000 | RNA polymerase III subunit RPC82 family protein | 0.67 | 0.32 | -0.32 | |||
13 | AT3G49600 | ubiquitin-specific protease 26 | ATUBP26, SUP32, ubiquitin-specific protease 26 |
0.67 | 0.3 | -0.31 | ||
14 | AT4G23950 | Galactose-binding protein | 0.67 | 0.31 | -0.31 | |||
15 | AT1G03610 | Protein of unknown function (DUF789) | -0.67 | 0.34 | -0.31 | |||
16 | AT5G18820 | TCP-1/cpn60 chaperonin family protein | chaperonin-60alpha2, embryo defective 3007 |
0.67 | 0.3 | -0.31 | ||
17 | AT5G17510 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.66 | 0.31 | -0.31 | |||
18 | AT1G17460 | TRF-like 3 | TRF-like 3 | 0.66 | 0.32 | -0.32 | ||
19 | AT3G03270 | Adenine nucleotide alpha hydrolases-like superfamily protein |
-0.65 | 0.3 | -0.33 | |||
20 | AT4G21070 | breast cancer susceptibility1 | ARABIDOPSIS THALIANA BREAST CANCER SUSCEPTIBILITY1, breast cancer susceptibility1 |
0.65 | 0.33 | -0.31 | ||
21 | AT2G30380 | Plant protein of unknown function (DUF641) | 0.65 | 0.31 | -0.32 | |||
22 | AT2G46260 | BTB/POZ/Kelch-associated protein | -0.64 | 0.32 | -0.32 | |||
23 | AT1G15280 | CASC3/Barentsz eIF4AIII binding | 0.64 | 0.3 | -0.32 | |||
24 | AT3G01400 | ARM repeat superfamily protein | -0.64 | 0.31 | -0.3 | |||
25 | AT1G09320 | agenet domain-containing protein | 0.63 | 0.32 | -0.3 | |||
26 | AT1G38340 | transposable element gene | 0.63 | 0.31 | -0.34 | |||
27 | AT4G14170 | Pentatricopeptide repeat (PPR) superfamily protein | 0.63 | 0.32 | -0.33 | |||
28 | AT2G18750 | Calmodulin-binding protein | -0.63 | 0.32 | -0.32 | |||
29 | AT1G05610 | ADP-glucose pyrophosphorylase small subunit 2 | ADP-glucose pyrophosphorylase small subunit 2 |
-0.63 | 0.31 | -0.32 | ||
30 | AT3G24315 | Sec20 family protein | AtSec20 | -0.62 | 0.31 | -0.3 | ||
31 | AT5G64180 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.62 | 0.31 | -0.33 | |||
32 | AT3G24320 | MUTL protein homolog 1 | ATMSH1, CHLOROPLAST MUTATOR, CHM1, MUTL protein homolog 1 |
0.62 | 0.31 | -0.31 | ||
33 | AT5G62520 | similar to RCD one 5 | similar to RCD one 5 | -0.62 | 0.32 | -0.3 | ||
34 | AT5G40520 | unknown protein; Has 3679 Blast hits to 2474 proteins in 390 species: Archae - 10; Bacteria - 571; Metazoa - 1012; Fungi - 528; Plants - 214; Viruses - 74; Other Eukaryotes - 1270 (source: NCBI BLink). |
0.62 | 0.32 | -0.32 | |||
35 | AT3G20770 | Ethylene insensitive 3 family protein | AtEIN3, ETHYLENE-INSENSITIVE3 | -0.61 | 0.33 | -0.31 | ||
36 | AT2G25070 | Protein phosphatase 2C family protein | -0.61 | 0.35 | -0.33 | |||
37 | AT1G33055 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: anaerobic respiration; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; Has 20 Blast hits to 20 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.61 | 0.33 | -0.32 | |||
38 | AT4G17960 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G46620.1); Has 46 Blast hits to 45 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.61 | 0.3 | -0.33 | |||
39 | AT2G07630 | transposable element gene | 0.61 | 0.31 | -0.31 | |||
40 | AT5G01480 | Cysteine/Histidine-rich C1 domain family protein | 0.61 | 0.29 | -0.33 | |||
41 | AT1G35330 | RING/U-box superfamily protein | -0.61 | 0.34 | -0.32 | |||
42 | AT2G27120 | DNA polymerase epsilon catalytic subunit | POL2B, TILTED 2 | 0.61 | 0.31 | -0.33 | ||
43 | AT5G61650 | CYCLIN P4;2 | CYCP4, CYCLIN P4;2 | -0.61 | 0.33 | -0.32 | ||
44 | AT1G08130 | DNA ligase 1 | DNA ligase 1, DNA ligase 1 | 0.61 | 0.31 | -0.36 | ||
45 | AT4G11400 | ARID/BRIGHT DNA-binding domain;ELM2 domain protein | -0.61 | 0.3 | -0.31 | |||
46 | AT3G48530 | SNF1-related protein kinase regulatory subunit gamma 1 | SNF1-related protein kinase regulatory subunit gamma 1 |
-0.6 | 0.31 | -0.32 | ||
47 | AT3G61690 | nucleotidyltransferases | 0.6 | 0.32 | -0.32 | |||
48 | AT1G75490 | Integrase-type DNA-binding superfamily protein | -0.6 | 0.32 | -0.3 | |||
49 | AT3G04880 | DNA-damage-repair/toleration protein (DRT102) | DNA-DAMAGE-REPAIR/TOLERATION 2 | -0.6 | 0.32 | -0.32 | ||
50 | AT2G35510 | similar to RCD one 1 | similar to RCD one 1 | 0.6 | 0.3 | -0.31 | ||
51 | AT1G71420 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.59 | 0.33 | -0.32 | |||
52 | AT5G62310 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein |
INCOMPLETE ROOT HAIR ELONGATION | -0.59 | 0.3 | -0.34 | ||
53 | AT4G27450 | Aluminium induced protein with YGL and LRDR motifs | -0.59 | 0.32 | -0.31 | |||
54 | AT2G02670 | pseudogene, hypothetical protein | 0.59 | 0.32 | -0.3 | |||
55 | AT5G55670 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.59 | 0.32 | -0.33 | |||
56 | AT2G04370 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.59 | 0.33 | -0.31 | |||
57 | AT5G58787 | RING/U-box superfamily protein | -0.59 | 0.32 | -0.32 | |||
58 | AT2G27470 | nuclear factor Y, subunit B11 | nuclear factor Y, subunit B11 | 0.59 | 0.33 | -0.31 | ||
59 | AT1G74740 | calcium-dependent protein kinase 30 | ATCPK30, CALCIUM-DEPENDENT PROTEIN KINASE 1A, calcium-dependent protein kinase 30 |
-0.59 | 0.33 | -0.31 | ||
60 | AT1G33350 | Pentatricopeptide repeat (PPR) superfamily protein | 0.59 | 0.32 | -0.34 | |||
61 | AT5G07700 | myb domain protein 76 | myb domain protein 76, myb domain protein 76 |
0.59 | 0.32 | -0.33 | ||
62 | AT2G20150 | unknown protein; Has 5 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.59 | 0.32 | -0.32 | |||
63 | AT2G28270 | Cysteine/Histidine-rich C1 domain family protein | -0.58 | 0.29 | -0.32 | |||
64 | AT1G08960 | cation exchanger 11 | CATION EXCHANGER 11, Arabidopsis thaliana cation calcium exchanger 5, cation exchanger 11, cation calcium exchanger 5 |
0.58 | 0.32 | -0.33 | ||
65 | AT1G43700 | VIRE2-interacting protein 1 | sulphate utilization efficiency 3, VIRE2-interacting protein 1 |
-0.58 | 0.33 | -0.32 | ||
66 | AT5G23640 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.58 | 0.33 | -0.3 | |||
67 | AT1G13050 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G26350.1); Has 538 Blast hits to 510 proteins in 88 species: Archae - 0; Bacteria - 23; Metazoa - 81; Fungi - 36; Plants - 361; Viruses - 8; Other Eukaryotes - 29 (source: NCBI BLink). |
0.58 | 0.32 | -0.3 | |||
68 | AT1G64330 | myosin heavy chain-related | 0.58 | 0.3 | -0.31 | |||
69 | AT3G23330 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.58 | 0.34 | -0.31 | |||
70 | AT5G65440 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.58 | 0.32 | -0.34 | |||
71 | AT1G48640 | Transmembrane amino acid transporter family protein | -0.58 | 0.32 | -0.32 | |||
72 | AT1G73380 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1308 (InterPro:IPR010733); Has 162 Blast hits to 160 proteins in 67 species: Archae - 0; Bacteria - 2; Metazoa - 120; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). |
-0.58 | 0.32 | -0.32 | |||
73 | AT4G38340 | Plant regulator RWP-RK family protein | 0.58 | 0.3 | -0.31 | |||
74 | AT2G43330 | inositol transporter 1 | INOSITOL TRANSPORTER 1, inositol transporter 1 |
-0.58 | 0.32 | -0.3 | ||
75 | AT1G64280 | regulatory protein (NPR1) | ARABIDOPSIS NONEXPRESSER OF PR GENES 1, NON-INDUCIBLE IMMUNITY 1, NONEXPRESSER OF PR GENES 1, SALICYLIC ACID INSENSITIVE 1 |
-0.57 | 0.3 | -0.33 | ||
76 | AT5G01940 | eukaryotic translation initiation factor 2B family protein / eIF-2B family protein |
-0.57 | 0.32 | -0.32 | |||
77 | AT2G19510 | LOB domain-containing protein 8 | LOB domain-containing protein 8 | -0.57 | 0.29 | -0.32 | ||
78 | AT3G26790 | AP2/B3-like transcriptional factor family protein | FUSCA 3 | -0.57 | 0.3 | -0.33 | ||
79 | AT1G32950 | Subtilase family protein | -0.57 | 0.32 | -0.3 | |||
80 | AT1G02660 | alpha/beta-Hydrolases superfamily protein | -0.56 | 0.33 | -0.29 | |||
81 | AT4G12040 | A20/AN1-like zinc finger family protein | AtSAP7, stress-associated protein 7 |
-0.56 | 0.33 | -0.3 | ||
82 | AT1G33910 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.56 | 0.29 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
83 | C0088 | FAD | - | FAD | cytokinins degradation, lysine degradation II, valine degradation I, isoleucine degradation I, flavin biosynthesis I (bacteria and plants) |
-0.59 | 0.44 | -0.46 |