AT4G15150 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT4G15150
Description glycine-rich protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G15150 glycine-rich protein 1 0.32 -0.32
2 AT3G42880 Leucine-rich repeat protein kinase family protein -0.6 0.31 -0.32
3 AT2G34870 hydroxyproline-rich glycoprotein family protein maternal effect embryo arrest 26 -0.58 0.32 -0.31
4 AT3G44900 cation/H+ exchanger 4 cation/H+ exchanger 4, cation/H+
exchanger 4		 0.58 0.33 -0.29
5 AT3G44250 cytochrome P450, family 71, subfamily B, polypeptide 38 cytochrome P450, family 71,
subfamily B, polypeptide 38		 0.56 0.3 -0.35
6 AT3G42770 F-box/RNI-like/FBD-like domains-containing protein -0.56 0.31 -0.31
7 AT1G60320 Toll-Interleukin-Resistance (TIR) domain family protein -0.56 0.31 -0.32
8 AT4G10070 KH domain-containing protein -0.55 0.29 -0.31
9 AT5G55100 SWAP (Suppressor-of-White-APricot)/surp domain-containing
protein		 0.55 0.33 -0.31
10 AT5G27020 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.54 0.31 -0.3
11 AT2G27870 transposable element gene -0.53 0.32 -0.32
12 AT2G18580 transposable element gene 0.53 0.32 -0.31
13 AT5G45420 Duplicated homeodomain-like superfamily protein membrane anchored MYB -0.53 0.32 -0.32
14 AT4G11020 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT4G23870.1); Has
1807 Blast hits to 1807 proteins in 277 species: Archae -
0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.53 0.32 -0.33
15 AT3G08820 Pentatricopeptide repeat (PPR) superfamily protein 0.52 0.3 -0.3
16 AT4G15650 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: male gametophyte,
flower, pollen tube; EXPRESSED DURING: L mature pollen
stage, M germinated pollen stage, 4 anthesis; Has 5184
Blast hits to 3451 proteins in 562 species: Archae - 30;
Bacteria - 838; Metazoa - 1576; Fungi - 798; Plants - 319;
Viruses - 111; Other Eukaryotes - 1512 (source: NCBI
BLink).		 0.52 0.33 -0.3
17 AT1G61550 S-locus lectin protein kinase family protein 0.52 0.32 -0.32
18 AT1G48880 TRICHOME BIREFRINGENCE-LIKE 7 TRICHOME BIREFRINGENCE-LIKE 7 -0.52 0.32 -0.33
19 AT3G25810 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 0.51 0.32 -0.3
20 AT3G18300 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G48780.1); Has 69 Blast hits
to 69 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.51 0.32 -0.31
21 AT4G30200 vernalization5/VIN3-like vernalization5/VIN3-like 1,
VIN3-Like 2		 -0.51 0.32 -0.33
22 AT3G62080 SNF7 family protein 0.51 0.3 -0.32
23 AT4G00960 Protein kinase superfamily protein 0.51 0.3 -0.3
24 AT2G10660 transposable element gene 0.51 0.32 -0.32
25 AT3G61570 GRIP-related ARF-binding domain-containing protein 1 GOLGIN CANDIDATE 3, GRIP-related
ARF-binding domain-containing
protein 1		 0.51 0.31 -0.31
26 AT4G24600 unknown protein; Has 10 Blast hits to 10 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.51 0.31 -0.31
27 AT5G46630 Clathrin adaptor complexes medium subunit family protein -0.51 0.32 -0.32
28 AT5G14380 arabinogalactan protein 6 arabinogalactan protein 6 -0.51 0.31 -0.33
29 AT5G08130 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 BIM1 -0.5 0.33 -0.31
30 AT4G27460 Cystathionine beta-synthase (CBS) family protein -0.5 0.33 -0.32
31 AT2G36940 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.5 0.35 -0.33
32 AT2G06190 transposable element gene -0.5 0.32 -0.33
33 AT1G62170 Serine protease inhibitor (SERPIN) family protein 0.49 0.29 -0.32
34 AT2G04840 Protein of unknown function (DUF295) 0.49 0.35 -0.3
35 AT1G69240 methyl esterase 15 ARABIDOPSIS THALIANA METHYL
ESTERASE 15, methyl esterase 15,
ROOT HAIR SPECIFIC 9		 -0.49 0.31 -0.32
36 AT2G24620 S-locus glycoprotein family protein -0.49 0.31 -0.34
37 AT1G21850 SKU5 similar 8 SKU5 similar 8 -0.48 0.31 -0.31
38 AT1G79860 RHO guanyl-nucleotide exchange factor 12 ATROPGEF12, MATERNAL EFFECT EMBRYO
ARREST 64, RHO guanyl-nucleotide
exchange factor 12		 -0.48 0.32 -0.3
39 AT2G16360 Ribosomal protein S25 family protein -0.48 0.31 -0.3
40 AT1G33220 Glycosyl hydrolase superfamily protein -0.48 0.32 -0.32
41 AT3G16160 Tesmin/TSO1-like CXC domain-containing protein -0.48 0.33 -0.34
42 AT1G23650 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.48 0.32 -0.35
43 AT3G03830 SAUR-like auxin-responsive protein family -0.48 0.31 -0.32
44 AT4G03290 EF hand calcium-binding protein family 0.48 0.29 -0.3
45 AT1G47485 Encodes CEP1, a 15-amino-acid peptide, which is mainly
expressed in the lateral root primordia. When
overexpressed or externally applied, CEP1 arrests root
growth. CEP1 is a candidate for a novel peptide plant
hormone.		 -0.48 0.31 -0.31
46 AT4G38230 calcium-dependent protein kinase 26 ARABIDOPSIS THALIANA
CALCIUM-DEPENDENT PROTEIN KINASE
26, calcium-dependent protein
kinase 26		 0.47 0.33 -0.3
47 AT1G55570 SKU5 similar 12 SKU5 similar 12 -0.47 0.34 -0.3
48 AT1G09680 Pentatricopeptide repeat (PPR) superfamily protein 0.47 0.32 -0.3
49 AT2G24960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits
to 509 proteins in 26 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other
Eukaryotes - 50 (source: NCBI BLink).		 0.47 0.32 -0.32
50 AT1G07330 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G29620.1); Has 597 Blast hits
to 536 proteins in 121 species: Archae - 2; Bacteria - 47;
Metazoa - 170; Fungi - 43; Plants - 98; Viruses - 0; Other
Eukaryotes - 237 (source: NCBI BLink).		 0.47 0.3 -0.32
51 AT5G58360 ovate family protein 3 ARABIDOPSIS THALIANA OVATE FAMILY
PROTEIN 3, ovate family protein 3		 -0.47 0.33 -0.31
52 AT5G46850 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.47 0.3 -0.31
53 AT5G52670 Copper transport protein family -0.47 0.32 -0.32
54 AT2G28610 Homeodomain-like superfamily protein PRESSED FLOWER, PRESSED FLOWER 1,
WUSCHEL RELATED HOMEOBOX 3		 -0.47 0.3 -0.31
55 AT1G09700 dsRNA-binding domain-like superfamily protein DSRNA-BINDING PROTEIN 1,
HYPONASTIC LEAVES 1		 0.47 0.32 -0.31
56 AT2G23440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root; Has 25 Blast hits
to 25 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.46 0.31 -0.32
57 AT2G30480 unknown protein; Has 35333 Blast hits to 34131 proteins in
2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 0.46 0.31 -0.29
58 AT3G28230 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: gene
silencing; LOCATED IN: nucleus; EXPRESSED IN: 15 plant
structures; EXPRESSED DURING: 6 growth stages; CONTAINS
InterPro DOMAIN/s: Something about silencing protein 10
(Sas10), C-terminal (InterPro:IPR018972); BEST Arabidopsis
thaliana protein match is: Sas10/U3 ribonucleoprotein (Utp)
family protein (TAIR:AT2G43650.1); Has 374 Blast hits to
360 proteins in 175 species: Archae - 0; Bacteria - 4;
Metazoa - 107; Fungi - 115; Plants - 56; Viruses - 0; Other
Eukaryotes - 92 (source: NCBI BLink).		 -0.46 0.3 -0.32
59 AT3G28520 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.46 0.32 -0.32
60 AT4G20160 LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures;
EXPRESSED DURING: L mature pollen stage, M germinated
pollen stage, 4 anthesis, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: RING/U-box superfamily protein (TAIR:AT1G30860.1); Has
64917 Blast hits to 39974 proteins in 1949 species: Archae
- 279; Bacteria - 7425; Metazoa - 26604; Fungi - 5788;
Plants - 3193; Viruses - 275; Other Eukaryotes - 21353
(source: NCBI BLink).		 -0.46 0.32 -0.28
61 AT3G19050 phragmoplast orienting kinesin 2 phragmoplast orienting kinesin 2 0.45 0.29 -0.31
62 AT2G11110 transposable element gene 0.45 0.3 -0.34
63 AT3G09790 ubiquitin 8 ubiquitin 8 -0.45 0.31 -0.32
64 AT5G43410 Integrase-type DNA-binding superfamily protein -0.45 0.31 -0.32
65 AT1G62320 ERD (early-responsive to dehydration stress) family protein -0.45 0.31 -0.32
66 AT4G03230 S-locus lectin protein kinase family protein 0.45 0.31 -0.34
67 AT4G39130 Dehydrin family protein -0.45 0.3 -0.28
68 AT3G42780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G09130.1); Has 5 Blast hits to
5 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.45 0.32 -0.3
69 AT2G07290 unknown protein; Has 8 Blast hits to 8 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.45 0.33 -0.32
70 AT4G26800 Pentatricopeptide repeat (PPR) superfamily protein 0.45 0.34 -0.3
71 AT5G07380 unknown protein; Has 84 Blast hits to 81 proteins in 31
species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 0;
Plants - 41; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 0.44 0.33 -0.31
72 AT5G39030 Protein kinase superfamily protein -0.44 0.32 -0.33
73 AT5G63900 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger domain		 0.44 0.33 -0.32
74 AT1G04540 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.44 0.31 -0.31
75 AT3G59170 F-box/RNI-like superfamily protein -0.44 0.35 -0.31
76 AT3G01020 ISCU-like 2 ISCU-LIKE 2, ISCU-like 2 -0.44 0.31 -0.31
77 AT1G74900 Pentatricopeptide repeat (PPR) superfamily protein organelle transcript processing
defect 43		 -0.44 0.33 -0.3
78 AT4G22440 unknown protein; Has 11 Blast hits to 11 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.43 0.32 -0.3
79 AT1G08860 Calcium-dependent phospholipid-binding Copine family
protein		 BONZAI 3 -0.43 0.34 -0.31
80 AT2G16960 ARM repeat superfamily protein -0.42 0.3 -0.31
81 AT3G58840 Tropomyosin-related peroxisomal and mitochondrial
division factor 1		 0.42 0.32 -0.31
82 AT1G16160 wall associated kinase-like 5 wall associated kinase-like 5 -0.42 0.31 -0.33
83 AT1G55440 Cysteine/Histidine-rich C1 domain family protein 0.42 0.31 -0.32
84 AT3G43770 transposable element gene 0.41 0.33 -0.33
85 AT4G35280 C2H2-like zinc finger protein DUO1-ACTIVATED ZINC FINGER 2 0.41 0.32 -0.3
86 AT5G61110 zinc ion binding 0.4 0.35 -0.32
87 AT3G30450 transposable element gene 0.4 0.3 -0.33
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
88 C0088 FAD - FAD cytokinins degradation,
lysine degradation II,
valine degradation I,
isoleucine degradation I,
flavin biosynthesis I (bacteria and plants) 		-0.64 0.45 -0.43 C0088
89 C0261 UDP-glucose - UDP-D-glucose quercetin glucoside biosynthesis (Arabidopsis),
abscisic acid glucose ester biosynthesis,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
UDP-glucose biosynthesis (from sucrose),
2,4,6-trinitrotoluene degradation,
galactose degradation I (Leloir pathway),
cytokinins-O-glucoside biosynthesis,
trehalose biosynthesis I,
dolichyl-diphosphooligosaccharide biosynthesis,
phenolic malonylglucosides biosynthesis,
callose biosynthesis,
superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside),
glucosinolate biosynthesis from hexahomomethionine,
coniferin metabolism,
glucosinolate biosynthesis from phenylalanine,
xyloglucan biosynthesis,
glucosinolate biosynthesis from pentahomomethionine,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
glucosinolate biosynthesis from dihomomethionine,
cellulose biosynthesis,
sinapate ester biosynthesis,
superpathway of IAA conjugate biosynthesis,
salicylate glucosides biosynthesis IV,
sucrose biosynthesis I,
glucosinolate biosynthesis from trihomomethionine,
tetrahydrofolate biosynthesis II,
sucrose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
coumarin biosynthesis (via 2-coumarate),
superpathway of sucrose and starch metabolism I (non-photosynthetic tissue),
monolignol glucosides biosynthesis,
glucosinolate biosynthesis from homomethionine,
kaempferol glucoside biosynthesis (Arabidopsis),
salicylate glucosides biosynthesis III,
cytokinins 7-N-glucoside biosynthesis,
galactose degradation III,
cytokinins 9-N-glucoside biosynthesis,
glucosinolate biosynthesis from tryptophan,
UDP-galactose biosynthesis,
salicylate glucosides biosynthesis II,
stachyose degradation,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
UDP-glucose biosynthesis (from glucose 6-phosphate),
sphingolipid biosynthesis (plants),
glucosinolate biosynthesis from tetrahomomethionine,
galactose degradation II,
UDP-L-rhamnose biosynthesis 		-0.61 0.42 -0.45 C0261