AT4G15200 : formin 3
Query Information
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AGICode AT4G15200
Description formin 3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT4G15200 formin 3 formin 3, formin 3 1 0.31 -0.34
2 AT5G10810 enhancer of rudimentary protein, putative ARABIDOPSIS THALIANA ENHANCER OF
RUDIMENTARY HOMOLOGUE, ENHANCER OF
RUDIMENTARY HOMOLOGUE		 0.75 0.32 -0.31
3 AT5G24280 gamma-irradiation and mitomycin c induced 1 GAMMA-IRRADIATION AND MITOMYCIN C
INDUCED 1		 -0.74 0.3 -0.33
4 AT2G32980 unknown protein; Has 158 Blast hits to 154 proteins in 73
species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source:
NCBI BLink).		 0.72 0.31 -0.31
5 AT3G43920 dicer-like 3 DICER-LIKE 3, dicer-like 3 -0.72 0.3 -0.31
6 AT1G20120 GDSL-like Lipase/Acylhydrolase superfamily protein -0.71 0.32 -0.32
7 AT2G14260 proline iminopeptidase proline iminopeptidase 0.7 0.31 -0.31
8 AT2G04330 transposable element gene -0.7 0.34 -0.32
9 AT3G54930 Protein phosphatase 2A regulatory B subunit family protein 0.69 0.31 -0.3
10 AT1G61170 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 19 plant
structures; EXPRESSED DURING: 12 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G11125.1); Has 54 Blast hits to 54 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0;
Plants - 34; Viruses - 1; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.69 0.32 -0.3
11 AT3G66656 AGAMOUS-like 91 AGAMOUS-like 91 0.69 0.31 -0.31
12 AT1G61810 beta-glucosidase 45 beta-glucosidase 45 -0.68 0.32 -0.34
13 AT3G01920 DHBP synthase RibB-like alpha/beta domain 0.68 0.3 -0.32
14 AT5G53800 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.67 0.32 -0.31
15 AT5G10120 Ethylene insensitive 3 family protein -0.67 0.29 -0.35
16 AT1G14310 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.67 0.33 -0.33
17 AT5G19630 alpha/beta-Hydrolases superfamily protein 0.67 0.31 -0.31
18 AT4G38440 LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: RNA polymerase II-associated protein 1,
C-terminal (InterPro:IPR013929), RNA polymerase
II-associated protein 1, N-terminal (InterPro:IPR013930);
Has 276 Blast hits to 220 proteins in 102 species: Archae -
0; Bacteria - 2; Metazoa - 151; Fungi - 65; Plants - 41;
Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).		 MINIYO -0.66 0.3 -0.33
19 AT3G47380 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.66 0.33 -0.31
20 AT2G40720 Tetratricopeptide repeat (TPR)-like superfamily protein -0.66 0.31 -0.31
21 AT5G12050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G13980.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.66 0.33 -0.32
22 AT1G53790 F-box and associated interaction domains-containing protein -0.66 0.33 -0.3
23 AT4G34850 Chalcone and stilbene synthase family protein LESS ADHESIVE POLLEN 5 -0.66 0.32 -0.3
24 AT1G56690 Pentatricopeptide repeat (PPR) superfamily protein -0.66 0.34 -0.32
25 AT2G05200 transposable element gene -0.65 0.31 -0.31
26 AT3G11460 Pentatricopeptide repeat (PPR) superfamily protein -0.65 0.34 -0.29
27 AT5G45180 Flavin-binding monooxygenase family protein -0.65 0.32 -0.31
28 AT2G25730 unknown protein; Has 157 Blast hits to 144 proteins in 62
species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi -
0; Plants - 35; Viruses - 0; Other Eukaryotes - 21 (source:
NCBI BLink).		 -0.65 0.32 -0.32
29 AT3G16570 rapid alkalinization factor 23 ARABIDOPSIS RAPID ALKALINIZATION
FACTOR 23, rapid alkalinization
factor 23		 0.65 0.29 -0.32
30 AT1G26760 SET domain protein 35 ATXR1, SET domain protein 35 -0.65 0.32 -0.32
31 AT4G04560 transposable element gene 0.64 0.32 -0.3
32 AT2G44150 histone-lysine N-methyltransferase ASHH3 histone-lysine N-methyltransferase
ASHH3, SET DOMAIN-CONTAINING
PROTEIN 7		 0.64 0.33 -0.3
33 AT5G60040 nuclear RNA polymerase C1 nuclear RNA polymerase C1 -0.64 0.32 -0.31
34 AT5G37970 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.64 0.31 -0.3
35 AT5G54530 Protein of unknown function, DUF538 0.64 0.32 -0.31
36 AT1G10950 transmembrane nine 1 AtTMN1, transmembrane nine 1 -0.64 0.34 -0.32
37 AT1G23640 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:
petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4
anthesis, petal differentiation and expansion stage;
CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF220 (InterPro:IPR003863); BEST Arabidopsis thaliana
protein match is: Domain of unknown function DUF220
(TAIR:AT1G23660.1); Has 270 Blast hits to 130 proteins in
12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 270; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.64 0.33 -0.31
38 AT1G66750 CDK-activating kinase 4 AT;CDKD;2, CDK-activating kinase
4, CDK-ACTIVATING KINASE 4,
CYCLIN-DEPENDENT KINASE D1;2,
CDKD;2		 0.64 0.31 -0.32
39 AT4G16920 Disease resistance protein (TIR-NBS-LRR class) family -0.63 0.35 -0.32
40 AT2G11150 transposable element gene -0.63 0.32 -0.31
41 AT2G34610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G30190.1); Has 342 Blast hits
to 279 proteins in 74 species: Archae - 0; Bacteria - 7;
Metazoa - 76; Fungi - 18; Plants - 51; Viruses - 0; Other
Eukaryotes - 190 (source: NCBI BLink).		 -0.63 0.31 -0.31
42 AT5G26140 Putative lysine decarboxylase family protein ATLOG9, LONELY GUY 9 0.63 0.32 -0.31
43 AT5G47520 RAB GTPase homolog A5A RAB GTPase homolog A5A, RAB GTPase
homolog A5A		 0.63 0.3 -0.31
44 AT3G15120 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.63 0.32 -0.32
45 AT1G05070 Protein of unknown function (DUF1068) 0.63 0.31 -0.31
46 AT5G24010 Protein kinase superfamily protein -0.63 0.3 -0.33
47 AT3G09735 S1FA-like DNA-binding protein 0.63 0.31 -0.32
48 AT3G51880 high mobility group B1 AtHMGB1, high mobility group B1,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR D1		 0.63 0.3 -0.31
49 AT5G48120 ARM repeat superfamily protein -0.63 0.31 -0.33
50 AT2G26940 C2H2-type zinc finger family protein 0.62 0.33 -0.33
51 AT5G15700 DNA/RNA polymerases superfamily protein -0.62 0.3 -0.31
52 AT2G01790 TRAF-like family protein -0.62 0.33 -0.32
53 AT3G29300 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 12 plant structures;
EXPRESSED DURING: 6 growth stages; Has 451 Blast hits to
349 proteins in 91 species: Archae - 0; Bacteria - 85;
Metazoa - 81; Fungi - 88; Plants - 18; Viruses - 1; Other
Eukaryotes - 178 (source: NCBI BLink).		 0.62 0.31 -0.29
54 AT4G03930 Plant invertase/pectin methylesterase inhibitor superfamily 0.62 0.33 -0.32
55 AT1G43810 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.62 0.31 -0.31
56 AT5G42560 Abscisic acid-responsive (TB2/DP1, HVA22) family protein 0.62 0.31 -0.32
57 AT1G61070 low-molecular-weight cysteine-rich 66 low-molecular-weight cysteine-rich
66, PLANT DEFENSIN 2.4		 0.62 0.31 -0.33
58 AT5G01310 APRATAXIN-like APRATAXIN-like -0.62 0.32 -0.33
59 AT3G50370 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 26 plant
structures; EXPRESSED DURING: 15 growth stages; Has 27734
Blast hits to 16708 proteins in 1259 species: Archae - 81;
Bacteria - 3434; Metazoa - 10876; Fungi - 2514; Plants -
987; Viruses - 212; Other Eukaryotes - 9630 (source: NCBI
BLink).		 -0.61 0.3 -0.32
60 AT2G24950 Protein of Unknown Function (DUF239) 0.61 0.31 -0.31
61 AT2G33530 serine carboxypeptidase-like 46 serine carboxypeptidase-like 46 0.61 0.31 -0.31
62 AT4G31160 DDB1-CUL4 associated factor 1 DDB1-CUL4 associated factor 1 -0.61 0.33 -0.33
63 AT2G36760 UDP-glucosyl transferase 73C2 UDP-glucosyl transferase 73C2 -0.61 0.34 -0.31
64 AT5G26700 RmlC-like cupins superfamily protein -0.61 0.33 -0.33
65 AT2G07650 transposable element gene -0.61 0.29 -0.33
66 AT3G46500 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.61 0.32 -0.31
67 AT5G65590 Dof-type zinc finger DNA-binding family protein 0.61 0.31 -0.32
68 AT1G59950 NAD(P)-linked oxidoreductase superfamily protein -0.61 0.31 -0.32
69 AT4G01920 Cysteine/Histidine-rich C1 domain family protein -0.61 0.31 -0.32
70 AT3G01380 transferases;sulfuric ester
hydrolases;catalytics;transferases		 -0.61 0.3 -0.3
71 AT4G08030 transposable element gene 0.61 0.32 -0.3
72 AT3G43630 Vacuolar iron transporter (VIT) family protein -0.61 0.31 -0.3
73 AT1G50350 BEST Arabidopsis thaliana protein match is: RING/U-box
superfamily protein (TAIR:AT3G19950.1); Has 37 Blast hits
to 37 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.6 0.31 -0.34
74 AT5G13530 protein kinases;ubiquitin-protein ligases KEEP ON GOING 0.6 0.34 -0.31
75 AT5G18180 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein -0.6 0.31 -0.3
76 AT3G24340 chromatin remodeling 40 chromatin remodeling 40 -0.6 0.31 -0.32
77 AT3G04605 transposable element gene -0.6 0.33 -0.31
78 AT5G41320 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.6 0.32 -0.31
79 AT1G10720 BSD domain-containing protein 0.6 0.3 -0.32
80 AT1G31380 TRAF-like family protein 0.6 0.3 -0.34
81 AT1G27595 CONTAINS InterPro DOMAIN/s: Symplekin tight junction
protein C-terminal (InterPro:IPR022075); BEST Arabidopsis
thaliana protein match is: HEAT repeat-containing protein
(TAIR:AT5G01400.1); Has 593 Blast hits to 297 proteins in
111 species: Archae - 0; Bacteria - 3; Metazoa - 139; Fungi
- 49; Plants - 57; Viruses - 0; Other Eukaryotes - 345
(source: NCBI BLink).		 -0.6 0.3 -0.31
82 AT5G25410 Protein of Unknown Function (DUF239) -0.6 0.31 -0.3
83 AT3G28720 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G58100.1); Has 1610 Blast hits to 344 proteins in
85 species: Archae - 0; Bacteria - 567; Metazoa - 95; Fungi
- 71; Plants - 145; Viruses - 0; Other Eukaryotes - 732
(source: NCBI BLink).		 -0.6 0.3 -0.3
84 AT5G07680 NAC domain containing protein 80 Arabidopsis NAC domain containing
protein 79, NAC domain containing
protein 80, ATNAC4, NAC domain
containing protein 80		 -0.6 0.31 -0.34
85 AT5G10090 Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat 13 0.6 0.33 -0.33
86 AT2G11360 transposable element gene -0.59 0.32 -0.33
87 AT1G27600 Nucleotide-diphospho-sugar transferases superfamily protein IRREGULAR XYLEM 9 Homolog,
IRREGULAR XYLEM 9-LIKE		 0.59 0.36 -0.33
88 AT1G36180 acetyl-CoA carboxylase 2 acetyl-CoA carboxylase 2 -0.59 0.3 -0.31
89 AT2G03320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.59 0.31 -0.34
90 AT5G61140 U5 small nuclear ribonucleoprotein helicase -0.59 0.33 -0.31
91 AT1G12180 BEST Arabidopsis thaliana protein match is: HSP20-like
chaperones superfamily protein (TAIR:AT5G47600.1); Has 8
Blast hits to 8 proteins in 3 species: Archae - 0; Bacteria
- 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.59 0.31 -0.33
92 AT3G13720 PRA1 (Prenylated rab acceptor) family protein PRENYLATED RAB ACCEPTOR 1.F3, PRA8 0.59 0.31 -0.32
93 AT1G61940 tubby like protein 4 tubby like protein 4, tubby like
protein 4		 -0.59 0.33 -0.32
94 AT2G29050 RHOMBOID-like 1 RHOMBOID-like 1, RHOMBOID-like 1 0.59 0.32 -0.31
95 AT5G46750 ARF-GAP domain 9 ARF-GAP domain 9 0.58 0.31 -0.32
96 AT2G23900 Pectin lyase-like superfamily protein 0.58 0.33 -0.3
97 AT1G53930 Ubiquitin-like superfamily protein 0.58 0.33 -0.31
98 AT5G15725 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root; Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.58 0.31 -0.32
99 AT1G15870 Mitochondrial glycoprotein family protein -0.58 0.3 -0.32
100 AT1G64020 Serine protease inhibitor (SERPIN) family protein -0.58 0.33 -0.33
101 AT2G46020 transcription regulatory protein SNF2, putative ARABIDOPSIS THALIANA BRAHMA,
BRAHMA, CHA2, CHROMATIN REMODELING
2		 -0.58 0.3 -0.3
102 AT3G53620 pyrophosphorylase 4 pyrophosphorylase 4,
pyrophosphorylase 4		 0.57 0.3 -0.33
103 AT5G24390 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.57 0.3 -0.33
104 AT3G20210 delta vacuolar processing enzyme delta vacuolar processing enzyme,
DELTA VACUOLAR PROCESSING ENZYME		 -0.57 0.31 -0.32
105 AT2G27410 Domain of unknown function (DUF313) 0.57 0.3 -0.29
106 AT2G30240 Cation/hydrogen exchanger family protein ATCHX13, CATION/H+ EXCHANGER 13 0.57 0.31 -0.32
107 AT3G29420 geranylgeranyl pyrophosphate synthase-related / GGPP
synthetase-related / farnesyltranstransferase-related		 -0.57 0.32 -0.31
108 AT1G65810 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.57 0.32 -0.31
109 AT1G67120 ATPases;nucleotide binding;ATP
binding;nucleoside-triphosphatases;transcription factor
binding		 -0.57 0.31 -0.31
110 AT4G33870 Peroxidase superfamily protein -0.57 0.32 -0.32
111 AT1G64790 ILITYHIA ILITYHIA -0.57 0.29 -0.3
112 AT5G65550 UDP-Glycosyltransferase superfamily protein -0.57 0.29 -0.32
113 AT1G42700 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
response to cold; LOCATED IN: nucleus; BEST Arabidopsis
thaliana protein match is: Plant transposase (Ptta/En/Spm
family) (TAIR:AT1G40087.1); Has 10 Blast hits to 10
proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.57 0.33 -0.32
114 AT5G41310 P-loop nucleoside triphosphate hydrolases superfamily
protein with CH (Calponin Homology) domain		 0.56 0.32 -0.3
115 AT5G07040 RING/U-box superfamily protein 0.56 0.33 -0.33
116 AT4G10210 Protein of Unknown Function (DUF239) 0.56 0.32 -0.31
117 AT1G63590 Receptor-like protein kinase-related family protein 0.56 0.32 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
118 C0086 Disinapylspermidine - - - -0.7 0.46 -0.46
119 C0213 PR_MST_2410.2 - - - -0.65 0.45 -0.42
120 C0012 n-Eicosanoic acid - Arachidate fatty acid activation,
fatty acid ω-oxidation,
sporopollenin precursor biosynthesis,
acyl-ACP thioesterase pathway,
ceramide degradation,
fatty acid α-oxidation,
fatty acid ω-oxidation,
phospholipases,
triacylglycerol degradation 		-0.64 0.46 -0.45 C0012
121 C0001 α-Linolenic acid - (9,12,15)-Linolenate traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
poly-hydroxy fatty acids biosynthesis,
jasmonic acid biosynthesis 		-0.61 0.46 -0.42 C0001
122 C0214 PR_MST_2412.1 - - - -0.6 0.43 -0.46