AGICode | AT4G14300 |
Description | RNA-binding (RRM/RBD/RNP motifs) family protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT4G14300 | RNA-binding (RRM/RBD/RNP motifs) family protein | 1 | 0.3 | -0.33 | |||
2 | AT4G28990 | RNA-binding protein-related | 0.74 | 0.3 | -0.29 | |||
3 | AT5G09320 | Vacuolar sorting protein 9 (VPS9) domain | VPS9B | 0.74 | 0.33 | -0.31 | ||
4 | AT2G31010 | Protein kinase superfamily protein | 0.72 | 0.31 | -0.32 | |||
5 | AT5G18580 | tonneau 2 (TON2) | EMBRYO DEFECTIVE 40, FASS 1, FASS 2, FS1, GORDO, TONNEAU 2 |
0.7 | 0.29 | -0.31 | ||
6 | AT5G58600 | Plant protein of unknown function (DUF828) | POWDERY MILDEW RESISTANT 5, TRICHOME BIREFRINGENCE-LIKE 44 |
0.69 | 0.32 | -0.29 | ||
7 | AT2G17220 | Protein kinase superfamily protein | kinase 3 | -0.68 | 0.3 | -0.33 | ||
8 | AT1G47530 | MATE efflux family protein | 0.68 | 0.3 | -0.3 | |||
9 | AT1G51610 | Cation efflux family protein | 0.68 | 0.34 | -0.32 | |||
10 | AT1G19110 | inter-alpha-trypsin inhibitor heavy chain-related | 0.68 | 0.33 | -0.33 | |||
11 | AT2G28720 | Histone superfamily protein | 0.68 | 0.3 | -0.31 | |||
12 | AT5G63630 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.67 | 0.32 | -0.3 | |||
13 | AT3G61580 | Fatty acid/sphingolipid desaturase | AtSLD1, sphingoid LCB desaturase 1 | 0.67 | 0.3 | -0.3 | ||
14 | AT2G02100 | low-molecular-weight cysteine-rich 69 | low-molecular-weight cysteine-rich 69, PDF2.2 |
0.66 | 0.33 | -0.3 | ||
15 | AT1G22970 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G71150.1); Has 134 Blast hits to 132 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 66; Fungi - 10; Plants - 48; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). |
0.66 | 0.32 | -0.32 | |||
16 | AT5G46070 | Guanylate-binding family protein | 0.66 | 0.32 | -0.3 | |||
17 | AT3G45980 | Histone superfamily protein | HISTONE H2B, HTB9 | 0.66 | 0.31 | -0.34 | ||
18 | AT5G57660 | CONSTANS-like 5 | ATCOL5, CONSTANS-like 5 | 0.65 | 0.31 | -0.34 | ||
19 | AT3G50670 | U1 small nuclear ribonucleoprotein-70K | U1 small nuclear ribonucleoprotein-70K, U1SNRNP |
0.65 | 0.31 | -0.28 | ||
20 | AT1G52630 | O-fucosyltransferase family protein | 0.64 | 0.33 | -0.3 | |||
21 | AT1G21460 | Nodulin MtN3 family protein | AtSWEET1, SWEET1 | 0.64 | 0.31 | -0.3 | ||
22 | AT1G68440 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G25400.2); Has 86 Blast hits to 86 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 27; Fungi - 11; Plants - 24; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). |
-0.64 | 0.31 | -0.32 | |||
23 | AT2G29210 | splicing factor PWI domain-containing protein | 0.64 | 0.32 | -0.29 | |||
24 | AT1G21660 | Chaperone DnaJ-domain superfamily protein | 0.64 | 0.32 | -0.33 | |||
25 | AT3G18790 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Isy1-like splicing (InterPro:IPR009360); Has 1147 Blast hits to 965 proteins in 236 species: Archae - 12; Bacteria - 13; Metazoa - 351; Fungi - 230; Plants - 49; Viruses - 9; Other Eukaryotes - 483 (source: NCBI BLink). |
0.64 | 0.3 | -0.31 | |||
26 | AT4G28320 | Glycosyl hydrolase superfamily protein | AtMAN5, endo-beta-mannase 5 | 0.64 | 0.32 | -0.3 | ||
27 | AT4G16650 | O-fucosyltransferase family protein | 0.63 | 0.33 | -0.32 | |||
28 | AT1G13930 | Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. |
0.63 | 0.31 | -0.32 | |||
29 | AT2G47330 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.63 | 0.29 | -0.32 | |||
30 | AT1G54310 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.63 | 0.33 | -0.33 | |||
31 | AT5G56140 | RNA-binding KH domain-containing protein | 0.63 | 0.32 | -0.32 | |||
32 | AT1G67510 | Leucine-rich repeat protein kinase family protein | 0.63 | 0.31 | -0.31 | |||
33 | AT1G20910 | ARID/BRIGHT DNA-binding domain-containing protein | 0.62 | 0.32 | -0.31 | |||
34 | AT1G46768 | related to AP2 1 | related to AP2 1 | 0.62 | 0.31 | -0.33 | ||
35 | AT3G53210 | nodulin MtN21 /EamA-like transporter family protein | -0.62 | 0.33 | -0.3 | |||
36 | AT2G17560 | high mobility group B4 | high mobility group B4, NFD04, NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR D4 |
0.62 | 0.32 | -0.32 | ||
37 | AT2G20050 | protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases |
0.62 | 0.31 | -0.31 | |||
38 | AT5G63290 | Radical SAM superfamily protein | 0.62 | 0.32 | -0.3 | |||
39 | AT4G21060 | Galactosyltransferase family protein | 0.62 | 0.3 | -0.32 | |||
40 | AT4G18520 | Pentatricopeptide repeat (PPR) superfamily protein | 0.61 | 0.31 | -0.29 | |||
41 | AT5G51170 | unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0406 (InterPro:IPR019146); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.61 | 0.3 | -0.31 | |||
42 | AT5G52040 | RNA-binding (RRM/RBD/RNP motifs) family protein | arginine/serine-rich splicing factor 41, ATRSP41, arginine/serine-rich splicing factor 41 |
0.61 | 0.34 | -0.31 | ||
43 | AT1G07130 | Nucleic acid-binding, OB-fold-like protein | ATSTN1, STN1 | -0.61 | 0.31 | -0.32 | ||
44 | AT1G59600 | ZCW7 | ZCW7 | 0.6 | 0.32 | -0.31 | ||
45 | AT1G72050 | transcription factor IIIA | transcription factor IIIA | 0.6 | 0.31 | -0.31 | ||
46 | AT1G16610 | arginine/serine-rich 45 | RNPS1, arginine/serine-rich 45 | 0.6 | 0.31 | -0.33 | ||
47 | AT2G46610 | RNA-binding (RRM/RBD/RNP motifs) family protein | arginine/serine-rich splicing factor 31a, arginine/serine-rich splicing factor 31a |
-0.6 | 0.32 | -0.32 | ||
48 | AT2G46450 | cyclic nucleotide-gated channel 12 | cyclic nucleotide-gated channel 12, cyclic nucleotide-gated channel 12 |
-0.58 | 0.3 | -0.31 | ||
49 | AT2G26170 | cytochrome P450, family 711, subfamily A, polypeptide 1 | cytochrome P450, family 711, subfamily A, polypeptide 1, MORE AXILLARY BRANCHES 1 |
-0.57 | 0.32 | -0.31 | ||
50 | AT1G77660 | Histone H3 K4-specific methyltransferase SET7/9 family protein |
-0.56 | 0.31 | -0.3 | |||
51 | AT4G19660 | NPR1-like protein 4 | ATNPR4, NPR1-like protein 4 | -0.51 | 0.3 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
52 | C0118 | Hyperoside | - | Quercetin-3-glucoside | quercetin glucoside biosynthesis (Arabidopsis), rutin biosynthesis |
0.73 | 0.43 | -0.48 |