AT1G25290 : RHOMBOID-like protein 10
Query Information
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AGICode AT1G25290
Description RHOMBOID-like protein 10
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G25290 RHOMBOID-like protein 10 RHOMBOID-like protein 10,
RHOMBOID-like protein 10		 1 0.32 -0.32
2 AT3G05350 Metallopeptidase M24 family protein 0.83 0.32 -0.32
3 AT2G04700 ferredoxin thioredoxin reductase catalytic beta chain
family protein		 0.82 0.31 -0.29
4 AT2G28800 63 kDa inner membrane family protein ALBINO 3 0.82 0.3 -0.3
5 AT4G28025 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.82 0.34 -0.33
6 AT1G32160 Protein of unknown function (DUF760) 0.81 0.32 -0.33
7 AT4G33670 NAD(P)-linked oxidoreductase superfamily protein 0.8 0.32 -0.33
8 AT3G01370 CRM family member 2 Arabidopsis thaliana CRM family
member 2, CRM family member 2		 0.79 0.33 -0.31
9 AT1G35340 ATP-dependent protease La (LON) domain protein 0.79 0.32 -0.31
10 AT1G33290 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.78 0.31 -0.3
11 ATCG00570 photosystem II reaction center protein F photosystem II reaction center
protein F		 0.78 0.32 -0.32
12 AT5G66090 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN:
21 plant structures; EXPRESSED DURING: 13 growth stages;
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 0.78 0.31 -0.31
13 AT4G37200 Thioredoxin superfamily protein HIGH CHLOROPHYLL FLUORESCENCE 164 0.78 0.3 -0.3
14 AT3G10230 lycopene cyclase AtLCY, lycopene cyclase 0.77 0.31 -0.35
15 AT3G15900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 26 Blast hits to 26 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.77 0.28 -0.32
16 AT5G04440 Protein of unknown function (DUF1997) 0.77 0.32 -0.3
17 AT3G27925 DegP protease 1 DegP protease 1, DegP protease 1 0.76 0.31 -0.32
18 AT5G03880 Thioredoxin family protein 0.76 0.29 -0.33
19 AT5G18100 copper/zinc superoxide dismutase 3 copper/zinc superoxide dismutase 3 0.76 0.32 -0.31
20 AT4G15560 Deoxyxylulose-5-phosphate synthase AtCLA1, CLA, CLOROPLASTOS
ALTERADOS 1, DEF,
1-DEOXY-D-XYLULOSE 5-PHOSPHATE
SYNTHASE 2, 1-DEOXY-D-XYLULOSE
5-PHOSPHATE SYNTHASE		 0.76 0.32 -0.31
21 AT3G58140 phenylalanyl-tRNA synthetase class IIc family protein 0.75 0.32 -0.3
22 AT3G20930 RNA-binding (RRM/RBD/RNP motifs) family protein 0.75 0.3 -0.31
23 AT5G12130 integral membrane TerC family protein TELLURITE RESISTANCE C, PIGMENT
DEFECTIVE 149		 0.75 0.31 -0.29
24 AT5G14460 Pseudouridine synthase family protein 0.74 0.33 -0.31
25 AT1G33330 Class I peptide chain release factor 0.74 0.31 -0.32
26 AT1G67830 alpha-fucosidase 1 Arabidopsis thaliana
alpha-fucosidase 1,
alpha-fucosidase 1		 0.74 0.33 -0.29
27 AT1G27510 Protein of unknown function (DUF3506) 0.74 0.32 -0.33
28 AT4G09900 methyl esterase 12 ARABIDOPSIS THALIANA METHYL
ESTERASE 12, methyl esterase 12		 0.74 0.29 -0.31
29 AT3G15160 unknown protein; Has 266 Blast hits to 264 proteins in 44
species: Archae - 0; Bacteria - 0; Metazoa - 58; Fungi - 0;
Plants - 199; Viruses - 0; Other Eukaryotes - 9 (source:
NCBI BLink).		 0.73 0.34 -0.31
30 AT1G65260 plastid transcriptionally active 4 plastid transcriptionally active
4, VESICLE-INDUCING PROTEIN IN
PLASTIDS 1		 0.73 0.29 -0.3
31 AT1G68830 STT7 homolog STN7 STT7 homolog STN7 0.73 0.31 -0.34
32 AT1G31800 cytochrome P450, family 97, subfamily A, polypeptide 3 cytochrome P450, family 97,
subfamily A, polypeptide 3, LUTEIN
DEFICIENT 5		 0.73 0.32 -0.31
33 AT3G57770 Protein kinase superfamily protein 0.73 0.33 -0.3
34 AT5G45170 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.73 0.31 -0.3
35 AT5G06130 chaperone protein dnaJ-related 0.73 0.34 -0.32
36 AT4G30310 FGGY family of carbohydrate kinase 0.72 0.31 -0.34
37 AT2G33255 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.72 0.33 -0.32
38 AT3G19900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF3067 (InterPro:IPR021420);
Has 276 Blast hits to 276 proteins in 83 species: Archae -
0; Bacteria - 112; Metazoa - 0; Fungi - 2; Plants - 59;
Viruses - 0; Other Eukaryotes - 103 (source: NCBI BLink).		 0.72 0.3 -0.33
39 AT4G26700 fimbrin 1 ARABIDOPSIS THALIANA FIMBRIN 1,
fimbrin 1		 0.71 0.31 -0.31
40 AT3G53920 RNApolymerase sigma-subunit C SIGMA FACTOR 3, RNApolymerase
sigma-subunit C		 0.71 0.3 -0.32
41 AT2G04230 FBD, F-box and Leucine Rich Repeat domains containing
protein		 0.71 0.32 -0.3
42 AT4G33510 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase 3-deoxy-d-arabino-heptulosonate
7-phosphate synthase		 0.71 0.3 -0.32
43 AT2G01220 Nucleotidylyl transferase superfamily protein 0.71 0.31 -0.32
44 AT1G52510 alpha/beta-Hydrolases superfamily protein 0.71 0.32 -0.32
45 AT5G60600 4-hydroxy-3-methylbut-2-enyl diphosphate synthase CHLOROPLAST BIOGENESIS 4,
CONSTITUTIVE SUBTILISIN 3, GCPE,
4-hydroxy-3-methylbut-2-enyl
diphosphate synthase, ISPG		 0.71 0.31 -0.31
46 AT4G33460 ABC transporter family protein ATP-binding cassette I10, ATNAP13,
embryo defective 2751		 0.7 0.3 -0.31
47 AT5G38360 alpha/beta-Hydrolases superfamily protein 0.7 0.33 -0.33
48 AT1G27385 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF493 (InterPro:IPR007454);
Has 76 Blast hits to 76 proteins in 23 species: Archae - 0;
Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 69; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 0.7 0.3 -0.31
49 AT5G11380 1-deoxy-D-xylulose 5-phosphate synthase 3 1-deoxy-D-xylulose 5-phosphate
synthase 3		 0.7 0.31 -0.3
50 AT2G01320 ABC-2 type transporter family protein ATP-binding cassette G7 0.7 0.31 -0.3
51 AT2G30170 Protein phosphatase 2C family protein 0.7 0.32 -0.32
52 AT2G47460 myb domain protein 12 MYB DOMAIN PROTEIN 12, myb domain
protein 12, PRODUCTION OF FLAVONOL
GLYCOSIDES 1		 -0.69 0.31 -0.3
53 AT1G31190 myo-inositol monophosphatase like 1 myo-inositol monophosphatase like
1		 0.69 0.31 -0.34
54 AT2G26540 uroporphyrinogen-III synthase family protein DOMAIN OF UNKNOWN FUNCTION 724 3,
ARABIDOPSIS THALIANA
UROPORPHYRINOGEN III SYNTHASE,
DOMAIN OF UNKNOWN FUNCTION 724 3,
HEMD, UROPORPHYRINOGEN III
SYNTHASE		 0.69 0.32 -0.29
55 AT5G45390 CLP protease P4 CLP protease P4, NUCLEAR-ENCODED
CLP PROTEASE P4		 0.69 0.29 -0.32
56 AT1G32360 Zinc finger (CCCH-type) family protein 0.69 0.34 -0.32
57 AT4G17040 CLP protease R subunit 4 CLP protease R subunit 4, happy on
norflurazon 5		 0.68 0.32 -0.32
58 AT1G24040 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.68 0.31 -0.31
59 AT3G09150 phytochromobilin:ferredoxin oxidoreductase, chloroplast /
phytochromobilin synthase (HY2)		 ARABIDOPSIS ELONGATED HYPOCOTYL 2,
GENOMES UNCOUPLED 3, ELONGATED
HYPOCOTYL 2		 0.68 0.34 -0.34
60 AT4G15750 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.68 0.31 -0.3
61 AT5G63060 Sec14p-like phosphatidylinositol transfer family protein 0.68 0.3 -0.32
62 AT5G61830 NAD(P)-binding Rossmann-fold superfamily protein 0.68 0.33 -0.31
63 AT4G27390 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 0.68 0.32 -0.31
64 ATCG00580 photosystem II reaction center protein E photosystem II reaction center
protein E		 0.68 0.32 -0.29
65 AT4G13200 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
thylakoid, chloroplast thylakoid membrane, chloroplast,
plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 97 Blast hits to 97 proteins
in 46 species: Archae - 0; Bacteria - 65; Metazoa - 2;
Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 2
(source: NCBI BLink).		 0.68 0.31 -0.32
66 AT1G49390 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.67 0.32 -0.3
67 AT3G02940 myb domain protein 107 myb domain protein 107, myb domain
protein 107		 -0.67 0.34 -0.31
68 AT1G44970 Peroxidase superfamily protein -0.66 0.29 -0.31
69 AT5G56500 TCP-1/cpn60 chaperonin family protein chaperonin-60beta3 -0.66 0.31 -0.32
70 AT2G42570 TRICHOME BIREFRINGENCE-LIKE 39 TRICHOME BIREFRINGENCE-LIKE 39 -0.66 0.31 -0.3
71 AT5G66390 Peroxidase superfamily protein -0.66 0.31 -0.34
72 AT3G15240 Serine/threonine-protein kinase WNK (With No
Lysine)-related		 -0.65 0.29 -0.32
73 AT2G35270 Predicted AT-hook DNA-binding family protein GIANT KILLER -0.65 0.32 -0.33
74 AT5G20240 K-box region and MADS-box transcription factor family
protein 		PISTILLATA -0.64 0.34 -0.3
75 AT2G25980 Mannose-binding lectin superfamily protein -0.64 0.33 -0.31
76 AT5G13520 peptidase M1 family protein -0.63 0.33 -0.29
77 AT4G28410 Tyrosine transaminase family protein -0.63 0.31 -0.3
78 AT1G13970 Protein of unknown function (DUF1336) -0.63 0.32 -0.31
79 AT4G37400 cytochrome P450, family 81, subfamily F, polypeptide 3 cytochrome P450, family 81,
subfamily F, polypeptide 3		 -0.63 0.29 -0.31
80 AT2G16570 GLN phosphoribosyl pyrophosphate amidotransferase 1 GLN phosphoribosyl pyrophosphate
amidotransferase 1, ATASE, GLN
phosphoribosyl pyrophosphate
amidotransferase 1		 -0.63 0.29 -0.31
81 AT2G45430 AT-hook motif nuclear-localized protein 22 AT-hook motif nuclear-localized
protein 22		 -0.62 0.32 -0.32
82 AT2G46140 Late embryogenesis abundant protein -0.61 0.31 -0.31
83 AT3G25110 fatA acyl-ACP thioesterase fatA acyl-ACP thioesterase, fatA
acyl-ACP thioesterase		 -0.6 0.28 -0.33
84 AT5G10720 histidine kinase 5 histidine kinase 5, CYTOKININ
INDEPENDENT 2, histidine kinase 5		 -0.6 0.33 -0.3
85 AT5G53290 cytokinin response factor 3 cytokinin response factor 3 -0.6 0.33 -0.32
86 AT1G18880 Major facilitator superfamily protein nitrate transporter 1.9 -0.6 0.33 -0.3
87 AT4G17350 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region		 -0.59 0.29 -0.3
88 AT5G24270 Calcium-binding EF-hand family protein SALT OVERLY SENSITIVE 3,
CALCINEURIN B-LIKE PROTEIN 4, SALT
OVERLY SENSITIVE 3		 -0.59 0.32 -0.31
89 AT1G08500 early nodulin-like protein 18 AtENODL18, early nodulin-like
protein 18		 -0.59 0.32 -0.31
90 AT4G32870 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.59 0.33 -0.33
91 AT4G18510 CLAVATA3/ESR-related 2 CLAVATA3/ESR-related 2 -0.58 0.32 -0.32
92 AT3G05890 Low temperature and salt responsive protein family RARE-COLD-INDUCIBLE 2B -0.58 0.32 -0.32
93 AT1G04610 YUCCA 3 YUCCA 3 -0.58 0.31 -0.29
94 AT5G65800 ACC synthase 5 ACC synthase 5, ATACS5,
CYTOKININ-INSENSITIVE 5, ETHYLENE
OVERPRODUCER 2		 -0.58 0.31 -0.32
95 AT1G08320 bZIP transcription factor family protein bZIP21, TGACG (TGA) motif-binding
protein 9		 -0.57 0.32 -0.32
96 AT2G19580 tetraspanin2 tetraspanin2 -0.56 0.31 -0.33
97 AT4G39550 Galactose oxidase/kelch repeat superfamily protein -0.56 0.3 -0.31
98 AT1G67330 Protein of unknown function (DUF579) -0.56 0.3 -0.32
99 AT1G49270 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 7, proline-rich
extensin-like receptor kinase 7		 -0.56 0.35 -0.3
100 AT2G41780 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.56 0.28 -0.32
101 AT5G45920 SGNH hydrolase-type esterase superfamily protein -0.56 0.32 -0.32
102 AT1G79320 metacaspase 6 metacaspase 6, metacaspase 2c,
metacaspase 6, metacaspase 2c		 -0.55 0.32 -0.29
103 AT1G04130 Tetratricopeptide repeat (TPR)-like superfamily protein AtTPR2, tetratricopeptide repeat 2 -0.55 0.31 -0.32
104 AT1G51190 Integrase-type DNA-binding superfamily protein PLETHORA 2 -0.55 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
105 C0208 Phosphatidylinositol-34:2 - Phosphatidylinositol-34:2 3-phosphoinositide biosynthesis,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
sphingolipid biosynthesis,
linoleate biosynthesis I,
cutin biosynthesis,
glycerophosphodiester degradation,
phosphate acquisition,
glutathione redox reactions I 		-0.73 0.49 -0.52 C0208
106 C0081 Digalactosyldiacylglycerol-36:2 - Digalactosyldiacylglycerol-36:2 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.72 0.5 -0.48 C0081
107 C0084 Digalactosyldiacylglycerol-36:5 - Digalactosyldiacylglycerol-36:5 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.69 0.49 -0.46 C0084
108 C0199 Phosphatidylethanolamine-36:6 - Phosphatidylethanolamine-36:6 phospholipid biosynthesis II,
linoleate biosynthesis I,
phosphatidylethanolamine biosynthesis I,
phosphatidylethanolamine biosynthesis II,
glutathione redox reactions I 		-0.69 0.48 -0.43 C0199
109 C0083 Digalactosyldiacylglycerol-36:4 - Digalactosyldiacylglycerol-36:4 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.68 0.56 -0.51 C0083
110 C0085 Digalactosyldiacylglycerol-36:6 - Digalactosyldiacylglycerol-36:6 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		-0.67 0.52 -0.48 C0085
111 C0103 Glutaric acid - - - -0.67 0.47 -0.48
112 C0230 Rutin - - polyphenol biosynthesis -0.66 0.43 -0.43
113 C0197 Phosphatidylcholine-36:1 - Phosphatidylcholine-36:1 choline biosynthesis III,
diacylglycerol biosynthesis,
phospholipases,
triacylglycerol biosynthesis,
linoleate biosynthesis I,
phosphatidylcholine biosynthesis III,
glutathione redox reactions I 		-0.66 0.5 -0.47 C0197
114 C0238 Sitosterol 3-O-β-D-glucoside - 3-O-β-D-Glucosyl-β-sitosterol sphingolipid biosynthesis -0.55 0.34 -0.34 C0238