AT1G25260 : -
Query Information
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AGICode AT1G25260
Description Ribosomal protein L10 family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G25260 Ribosomal protein L10 family protein 1 0.31 -0.31
2 AT5G06360 Ribosomal protein S8e family protein 0.9 0.33 -0.3
3 AT1G02870 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Ribosome biogenesis protein Nop16
(InterPro:IPR019002); Has 104 Blast hits to 104 proteins in
57 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
63; Plants - 35; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.89 0.33 -0.31
4 AT5G16070 TCP-1/cpn60 chaperonin family protein 0.88 0.3 -0.29
5 AT1G04870 protein arginine methyltransferase 10 ATPRMT10, protein arginine
methyltransferase 10		 0.87 0.32 -0.32
6 AT3G03920 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein 0.86 0.32 -0.33
7 AT2G39990 eukaryotic translation initiation factor 2 Arabidopsis thaliana eukaryotic
translation initiation factor 3
subunit F, eukaryotic translation
initiation factor 2, eukaryotic
translation initiation factor 3
subunit F		 0.85 0.32 -0.3
8 AT5G14520 pescadillo-related 0.85 0.34 -0.33
9 AT3G11830 TCP-1/cpn60 chaperonin family protein 0.85 0.32 -0.31
10 AT2G37990 ribosome biogenesis regulatory protein (RRS1) family
protein		 0.84 0.32 -0.31
11 AT5G52820 WD-40 repeat family protein / notchless protein, putative 0.84 0.31 -0.33
12 AT5G04600 RNA-binding (RRM/RBD/RNP motifs) family protein 0.84 0.34 -0.31
13 AT4G32400 Mitochondrial substrate carrier family protein ARABIDOPSIS THALIANA BRITTLE 1,
EMBRYO DEFECTIVE 104, EMBRYO
DEFECTIVE 42, SODIUM
HYPERSENSITIVE 1		 0.84 0.32 -0.32
14 AT5G52470 fibrillarin 1 ATFBR1, ATFIB1, FIBRILLARIN 1,
fibrillarin 1,
SKP1/ASK1-INTERACTING PROTEIN		 0.83 0.31 -0.33
15 AT2G47420 Ribosomal RNA adenine dimethylase family protein adenosine dimethyl transferase 1A 0.83 0.32 -0.3
16 AT5G62440 Protein of unknown function (DUF3223) 0.83 0.32 -0.33
17 AT1G52930 Ribosomal RNA processing Brix domain protein 0.82 0.31 -0.34
18 AT1G02840 RNA-binding (RRM/RBD/RNP motifs) family protein Serine/Arginine-Rich Protein
Splicing Factor 34, ATSRP34, SR1,
Serine/Arginine-Rich Protein
Splicing Factor 34, SRP34		 0.82 0.28 -0.31
19 AT1G52980 GTP-binding family protein nuclear/nucleolar GTPase 2,
nuclear/nucleolar GTPase 2		 0.82 0.31 -0.32
20 AT1G24510 TCP-1/cpn60 chaperonin family protein 0.82 0.3 -0.31
21 AT4G34670 Ribosomal protein S3Ae 0.82 0.3 -0.33
22 AT5G02450 Ribosomal protein L36e family protein 0.82 0.32 -0.29
23 AT1G49760 poly(A) binding protein 8 poly(A) binding protein 8, POLY(A)
BINDING PROTEIN 8		 0.81 0.31 -0.29
24 AT1G10840 translation initiation factor 3 subunit H1 translation initiation factor 3
subunit H1		 0.81 0.29 -0.3
25 AT3G51270 protein serine/threonine kinases;ATP binding;catalytics 0.81 0.29 -0.31
26 AT1G49600 RNA-binding protein 47A RNA-binding protein 47A,
RNA-binding protein 47A		 0.81 0.31 -0.32
27 AT2G36930 zinc finger (C2H2 type) family protein 0.81 0.31 -0.31
28 AT2G36160 Ribosomal protein S11 family protein 0.81 0.3 -0.32
29 AT2G22400 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.8 0.32 -0.29
30 AT3G26410 methyltransferases;nucleic acid binding AtTRM11, tRNA modification 11 0.8 0.3 -0.32
31 AT5G49560 Putative methyltransferase family protein 0.8 0.32 -0.33
32 AT5G47680 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA
(guanine-N1-)-methyltransferase (InterPro:IPR016009), tRNA
(guanine-N(1)-)-methyltransferase, metazoa
(InterPro:IPR016653), tRNA (guanine-N1-)-methyltransferase,
eukaryotic (InterPro:IPR007356); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 AtTRM, tRNA modification 10 0.8 0.32 -0.34
33 AT2G28600 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.8 0.32 -0.31
34 AT1G78680 gamma-glutamyl hydrolase 2 gamma-glutamyl hydrolase 2,
gamma-glutamyl hydrolase 2		 -0.8 0.33 -0.32
35 AT3G08860 PYRIMIDINE 4 PYRIMIDINE 4 -0.8 0.3 -0.32
36 AT4G30930 Ribosomal protein L21 NUCLEAR FUSION DEFECTIVE 1 0.8 0.31 -0.31
37 AT5G08620 DEA(D/H)-box RNA helicase family protein RNA HELICASE 25, STRESS RESPONSE
SUPPRESSOR 2		 0.8 0.31 -0.33
38 AT2G19740 Ribosomal protein L31e family protein 0.8 0.33 -0.32
39 AT5G22330 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ATTIP49A, RESISTANCE TO
PSEUDOMONAS SYRINGAE PV MACULICOLA
INTERACTOR 1		 0.79 0.31 -0.33
40 AT1G13090 cytochrome P450, family 71, subfamily B, polypeptide 28 cytochrome P450, family 71,
subfamily B, polypeptide 28		 -0.79 0.31 -0.32
41 AT1G09760 U2 small nuclear ribonucleoprotein A U2 small nuclear ribonucleoprotein
A		 0.79 0.31 -0.33
42 AT3G60360 embryo sac development arrest 14 EMBRYO SAC DEVELOPMENT ARREST 14,
U3 SMALL NUCLEOLAR RNA-ASSOCIATED
PROTEIN 11		 0.79 0.32 -0.33
43 AT3G17465 ribosomal protein L3 plastid ribosomal protein L3 plastid 0.79 0.33 -0.32
44 AT5G20890 TCP-1/cpn60 chaperonin family protein 0.79 0.3 -0.32
45 AT4G31120 SHK1 binding protein 1 ATPRMT5, PROTEIN ARGININE
METHYLTRANSFERASE 5, SHK1 binding
protein 1		 0.79 0.3 -0.29
46 AT4G09800 S18 ribosomal protein S18 ribosomal protein 0.79 0.32 -0.3
47 AT5G48850 Tetratricopeptide repeat (TPR)-like superfamily protein SULPHUR DEFICIENCY-INDUCED 1 -0.79 0.32 -0.31
48 AT2G44510 CDK inhibitor P21 binding protein 0.79 0.31 -0.32
49 AT5G22840 Protein kinase superfamily protein 0.79 0.34 -0.32
50 AT3G01790 Ribosomal protein L13 family protein 0.79 0.32 -0.3
51 AT5G64680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; Has 114 Blast hits to 110
proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa -
42; Fungi - 10; Plants - 37; Viruses - 0; Other Eukaryotes
- 25 (source: NCBI BLink).		 0.78 0.32 -0.33
52 AT3G49580 response to low sulfur 1 RESPONSE TO LOW SULFUR 1 -0.78 0.31 -0.33
53 AT3G14600 Ribosomal protein L18ae/LX family protein 0.78 0.32 -0.34
54 AT4G32720 La protein 1 La protein 1, La protein 1 0.78 0.32 -0.3
55 AT2G17670 Tetratricopeptide repeat (TPR)-like superfamily protein 0.78 0.32 -0.3
56 AT4G23620 Ribosomal protein L25/Gln-tRNA synthetase,
anti-codon-binding domain		 0.78 0.3 -0.3
57 AT1G04510 MOS4-associated complex 3A MOS4-associated complex 3A 0.78 0.31 -0.36
58 AT1G10590 Nucleic acid-binding, OB-fold-like protein 0.77 0.33 -0.34
59 AT3G16310 mitotic phosphoprotein N' end (MPPN) family protein 0.77 0.33 -0.33
60 AT3G10420 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 SEEDLING PLASTID DEVELOPMENT 1 -0.77 0.34 -0.31
61 AT1G15420 CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12
(InterPro:IPR007148); Has 764 Blast hits to 656 proteins in
193 species: Archae - 0; Bacteria - 42; Metazoa - 237;
Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes -
223 (source: NCBI BLink).		 0.77 0.33 -0.31
62 AT4G22200 potassium transport 2/3 AKT2, potassium transport 2/3,
AKT3, potassium transport 2/3		 -0.77 0.31 -0.32
63 AT1G63160 replication factor C 2 EMBRYO DEFECTIVE 2811, replication
factor C 2		 0.77 0.32 -0.32
64 AT1G01940 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.77 0.34 -0.32
65 AT4G02230 Ribosomal protein L19e family protein 0.77 0.31 -0.34
66 AT2G18520 Tetratricopeptide repeat (TPR)-like superfamily protein 0.76 0.32 -0.32
67 AT5G53770 Nucleotidyltransferase family protein 0.76 0.29 -0.31
68 AT3G23830 glycine-rich RNA-binding protein 4 AtGRP4, GR-RBP4, glycine-rich
RNA-binding protein 4		 0.76 0.33 -0.33
69 AT1G03360 ribosomal RNA processing 4 ribosomal RNA processing 4,
ribosomal RNA processing 4		 0.76 0.31 -0.32
70 AT5G23050 acyl-activating enzyme 17 acyl-activating enzyme 17 -0.76 0.31 -0.28
71 AT1G19650 Sec14p-like phosphatidylinositol transfer family protein -0.76 0.32 -0.3
72 AT5G37670 HSP20-like chaperones superfamily protein -0.76 0.31 -0.3
73 AT1G63240 unknown protein; Has 460 Blast hits to 413 proteins in 106
species: Archae - 5; Bacteria - 12; Metazoa - 152; Fungi -
46; Plants - 43; Viruses - 2; Other Eukaryotes - 200
(source: NCBI BLink).		 -0.76 0.31 -0.33
74 AT1G62540 flavin-monooxygenase glucosinolate S-oxygenase 2 flavin-monooxygenase glucosinolate
S-oxygenase 2		 -0.76 0.33 -0.31
75 AT3G46210 Ribosomal protein S5 domain 2-like superfamily protein 0.76 0.31 -0.31
76 AT5G57120 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: nucleolus;
EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: LisH
dimerisation motif (InterPro:IPR006594), SRP40, C-terminal
(InterPro:IPR007718); Has 101969 Blast hits to 55488
proteins in 2506 species: Archae - 424; Bacteria - 13843;
Metazoa - 37674; Fungi - 9726; Plants - 4941; Viruses -
569; Other Eukaryotes - 34792 (source: NCBI BLink).		 0.76 0.31 -0.31
77 AT2G23070 Protein kinase superfamily protein 0.75 0.34 -0.33
78 AT5G12410 THUMP domain-containing protein 0.75 0.31 -0.31
79 AT1G72320 pumilio 23 pumilio 23, pumilio 23 0.75 0.3 -0.32
80 AT5G19300 CONTAINS InterPro DOMAIN/s: Nucleic acid-binding,
OB-fold-like (InterPro:IPR016027), Protein of unknown
function DUF171 (InterPro:IPR003750); Has 3649 Blast hits
to 1964 proteins in 291 species: Archae - 113; Bacteria -
121; Metazoa - 1082; Fungi - 399; Plants - 227; Viruses -
4; Other Eukaryotes - 1703 (source: NCBI BLink).		 0.75 0.3 -0.32
81 AT4G20020 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G44780.1); Has 28928 Blast
hits to 16023 proteins in 1033 species: Archae - 4;
Bacteria - 4155; Metazoa - 15463; Fungi - 2938; Plants -
3091; Viruses - 205; Other Eukaryotes - 3072 (source: NCBI
BLink).		 0.75 0.3 -0.33
82 AT1G52380 NUP50 (Nucleoporin 50 kDa) protein 0.75 0.34 -0.29
83 AT1G71480 Nuclear transport factor 2 (NTF2) family protein -0.74 0.33 -0.33
84 AT1G03380 homolog of yeast autophagy 18 (ATG18) G homolog of yeast autophagy 18
(ATG18) G, homolog of yeast
autophagy 18 (ATG18) G		 -0.74 0.34 -0.32
85 AT1G03290 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G02880.2); Has 13587 Blast
hits to 10183 proteins in 1114 species: Archae - 257;
Bacteria - 2402; Metazoa - 5637; Fungi - 960; Plants - 675;
Viruses - 54; Other Eukaryotes - 3602 (source: NCBI BLink).		 -0.74 0.33 -0.33
86 AT1G73040 Mannose-binding lectin superfamily protein -0.72 0.31 -0.32
87 AT2G41870 Remorin family protein -0.72 0.32 -0.31
88 AT2G39435 Phosphatidylinositol N-acetyglucosaminlytransferase subunit
P-related		 -0.71 0.32 -0.32
89 AT4G24450 phosphoglucan, water dikinase ATGWD2, GWD3, phosphoglucan, water
dikinase		 -0.71 0.32 -0.35
90 AT1G04770 Tetratricopeptide repeat (TPR)-like superfamily protein -0.71 0.3 -0.32
91 AT2G23430 Cyclin-dependent kinase inhibitor family protein ICK1, KIP-RELATED PROTEIN 1 -0.71 0.31 -0.31
92 AT4G29070 Phospholipase A2 family protein -0.69 0.3 -0.31
93 AT1G70160 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT4G27020.1); Has 108 Blast hits to 108 proteins in
20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 89; Viruses - 0; Other Eukaryotes - 19 (source:
NCBI BLink).		 -0.69 0.31 -0.33
94 AT4G31330 Protein of unknown function, DUF599 -0.69 0.31 -0.29
95 AT3G17700 cyclic nucleotide-binding transporter 1 CYCLIC NUCLEOTIDE-GATED CHANNEL
20, cyclic nucleotide-binding
transporter 1, CNGC20		 -0.69 0.3 -0.3
96 AT2G35050 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 -0.69 0.34 -0.29
97 AT5G03650 starch branching enzyme 2.2 starch branching enzyme 2.2 -0.68 0.3 -0.32
98 AT5G45350 proline-rich family protein -0.67 0.3 -0.32
99 AT1G56710 Pectin lyase-like superfamily protein -0.67 0.32 -0.33
100 AT5G23240 DNAJ heat shock N-terminal domain-containing protein -0.67 0.29 -0.31
101 AT1G19835 Plant protein of unknown function (DUF869) -0.67 0.33 -0.32
102 AT1G08190 vacuolar protein sorting 41 ATVAM2, VACUOLAR PROTEIN SORTING
41, VAM2, vacuolar protein sorting
41, ZIGZAG SUPPRESSOR 2		 -0.67 0.32 -0.32
103 AT4G23670 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.66 0.3 -0.3
104 AT3G56050 Protein kinase family protein -0.66 0.32 -0.3
105 AT2G46630 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; Has
110095 Blast hits to 59224 proteins in 2216 species: Archae
- 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843;
Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876
(source: NCBI BLink).		 -0.66 0.31 -0.34
106 AT3G23610 dual specificity protein phosphatase 1 dual specificity protein
phosphatase 1		 -0.66 0.33 -0.3
107 AT5G24655 response to low sulfur 4 RESPONSE TO LOW SULFUR 4 -0.66 0.31 -0.32
108 AT1G78130 Major facilitator superfamily protein unfertilized embryo sac 2 -0.66 0.31 -0.3
109 AT4G34630 unknown protein; Has 30 Blast hits to 30 proteins in 10
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 -0.66 0.33 -0.31
110 AT1G16730 unknown protein 6 unknown protein 6 -0.66 0.33 -0.32
111 AT2G38740 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.66 0.32 -0.31
112 AT1G54230 Winged helix-turn-helix transcription repressor DNA-binding -0.66 0.33 -0.34
113 AT1G36370 serine hydroxymethyltransferase 7 serine hydroxymethyltransferase 7 -0.66 0.31 -0.31
114 AT1G05060 unknown protein; Has 34 Blast hits to 34 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.65 0.32 -0.31
115 AT3G08840 D-alanine--D-alanine ligase family -0.65 0.31 -0.31
116 AT1G07640 Dof-type zinc finger DNA-binding family protein OBP2 -0.65 0.33 -0.32
117 AT4G24740 FUS3-complementing gene 2 FUS3-complementing gene 2, AME1,
FUS3-complementing gene 2		 -0.65 0.29 -0.31
118 AT2G44460 beta glucosidase 28 beta glucosidase 28 -0.65 0.32 -0.3
119 AT3G43800 glutathione S-transferase tau 27 glutathione S-transferase tau 27,
glutathione S-transferase tau 27		 -0.65 0.33 -0.32
120 AT4G23600 Tyrosine transaminase family protein CORONATINE INDUCED 1, JASMONIC
ACID RESPONSIVE 2		 -0.65 0.32 -0.33
121 AT4G02420 Concanavalin A-like lectin protein kinase family protein -0.64 0.33 -0.33
122 AT2G20340 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 -0.64 0.32 -0.33
123 AT5G07250 RHOMBOID-like protein 3 RHOMBOID-like protein 3,
RHOMBOID-like protein 3		 -0.64 0.3 -0.31
124 AT3G09600 Homeodomain-like superfamily protein LHY-CCA1-LIKE5, REVEILLE 8 -0.64 0.34 -0.32
125 AT5G24660 response to low sulfur 2 RESPONSE TO LOW SULFUR 2 -0.63 0.3 -0.32
126 AT2G01680 Ankyrin repeat family protein -0.63 0.31 -0.31
127 AT1G11840 glyoxalase I homolog glyoxalase I homolog, glyoxalase I
homolog		 -0.63 0.31 -0.28
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
128 C0070 Cyanidin 3-O-[2''-O-(2'''-O-(sinapoyl)xylosyl) 6''-O-(p-O-coumaroyl) glucoside] 5-O-[6''''-O-(malonyl) glucoside] - - - -0.72 0.44 -0.47