AT1G28250 : -
Query Information
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AGICode AT1G28250
Description unknown protein; Has 22 Blast hits to 22 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G28250 unknown protein; Has 22 Blast hits to 22 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 1 0.3 -0.31
2 AT5G54750 Transport protein particle (TRAPP) component 0.85 0.32 -0.33
3 AT1G34780 APR-like 4 APR-like 4, APR-like 4 0.84 0.33 -0.33
4 AT2G37500 arginine biosynthesis protein ArgJ family 0.82 0.33 -0.32
5 AT1G56450 20S proteasome beta subunit G1 20S proteasome beta subunit G1 0.81 0.33 -0.3
6 AT1G01230 ORMDL family protein 0.8 0.3 -0.33
7 AT3G24350 syntaxin of plants 32 ATSYP32, syntaxin of plants 32 0.8 0.35 -0.32
8 AT1G09920 TRAF-type zinc finger-related 0.8 0.33 -0.32
9 AT1G04750 vesicle-associated membrane protein 721 AT VAMP7B, ATVAMP721,
vesicle-associated membrane
protein 721, VESICLE-ASSOCIATED
MEMBRANE PROTEIN 7B		 0.79 0.31 -0.32
10 AT3G22950 ADP-ribosylation factor C1 ADP-ribosylation factor C1,
ADP-ribosylation factor C1		 0.78 0.31 -0.3
11 AT5G59300 ubiquitin carrier protein 7 ARABIDOPSIS THALIANA UBIQUITIN
CARRIER PROTEIN 7, ubiquitin
carrier protein 7		 0.78 0.31 -0.3
12 AT2G19460 Protein of unknown function (DUF3511) 0.78 0.32 -0.31
13 AT3G57090 Tetratricopeptide repeat (TPR)-like superfamily protein BIGYIN, FISSION 1A 0.77 0.32 -0.31
14 AT1G20200 PAM domain (PCI/PINT associated module) protein EMBRYO DEFECTIVE 2719, HAPLESS 15 0.77 0.31 -0.34
15 AT1G45688 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G42860.1); Has 258 Blast
hits to 242 proteins in 39 species: Archae - 0; Bacteria -
11; Metazoa - 10; Fungi - 14; Plants - 198; Viruses - 17;
Other Eukaryotes - 8 (source: NCBI BLink).		 0.77 0.32 -0.31
16 AT5G15490 UDP-glucose 6-dehydrogenase family protein UDP-glucose dehydrogenase 3 0.77 0.34 -0.31
17 AT5G61210 soluble N-ethylmaleimide-sensitive factor adaptor protein
33		 ATSNAP33, ATSNAP33B, soluble
N-ethylmaleimide-sensitive factor
adaptor protein 33, SNP33		 0.77 0.32 -0.32
18 AT4G22310 Uncharacterised protein family (UPF0041) 0.77 0.33 -0.33
19 AT3G54170 FKBP12 interacting protein 37 FKBP12 interacting protein 37,
FKBP12 interacting protein 37		 0.76 0.33 -0.33
20 AT1G36320 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G37920.1); Has 93 Blast hits
to 90 proteins in 22 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other
Eukaryotes - 8 (source: NCBI BLink).		 0.76 0.31 -0.31
21 AT3G11850 Protein of unknown function, DUF593 0.76 0.3 -0.32
22 AT5G53310 myosin heavy chain-related 0.76 0.31 -0.31
23 AT1G23220 Dynein light chain type 1 family protein 0.76 0.34 -0.31
24 AT1G20575 Nucleotide-diphospho-sugar transferases superfamily protein dolichol phosphate mannose
synthase 1		 0.76 0.32 -0.32
25 AT3G51260 20S proteasome alpha subunit PAD1 20S proteasome alpha subunit PAD1 0.75 0.31 -0.3
26 AT2G17380 associated protein 19 associated protein 19 0.75 0.3 -0.3
27 AT1G28200 FH interacting protein 1 FH interacting protein 1 0.75 0.32 -0.31
28 AT3G17410 Protein kinase superfamily protein 0.75 0.34 -0.31
29 AT2G23080 Protein kinase superfamily protein casein kinase II, alpha chain 3 0.75 0.32 -0.31
30 AT1G56230 Protein of unknown function (DUF1399) -0.75 0.3 -0.33
31 AT1G43890 RAB GTPASE HOMOLOG B18 ARABIDOPSIS RAB GTPASE HOMOLOG C1,
ARABIDOPSIS RAB GTPASE HOMOLOG
B18, ARABIDOPSIS RAB GTPASE
HOMOLOG C1, RAB GTPASE HOMOLOG
B18, RAB GTPASE HOMOLOG 18-1, RAB
GTPASE HOMOLOG C1		 0.75 0.3 -0.31
32 AT2G27600 AAA-type ATPase family protein ATSKD1, SUPPRESSOR OF K+ TRANSPORT
GROWTH DEFECT1, VACUOLAR PROTEIN
SORTING 4		 0.75 0.32 -0.32
33 AT3G22110 20S proteasome alpha subunit C1 20S proteasome alpha subunit C1 0.75 0.31 -0.33
34 AT3G59360 UDP-galactose transporter 6 UDP-GALACTOSE TRANSPORTER 6,
UDP-galactose transporter 6		 0.75 0.31 -0.31
35 AT4G17170 RAB GTPase homolog B1C AT-RAB2, ARABIDOPSIS RAB GTPASE
HOMOLOG B1B, ATRAB2A, ATRABB1C,
RAB GTPASE HOMOLOG B1B, RAB2A, RAB
GTPase homolog B1C		 0.75 0.34 -0.29
36 AT4G34720 ATPase, F0/V0 complex, subunit C protein ATVHA-C1, AVA-P1, VACUOLAR
H+-PUMPING ATPASE C1		 0.74 0.32 -0.31
37 AT1G21920 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 -0.74 0.29 -0.32
38 AT1G74640 alpha/beta-Hydrolases superfamily protein 0.74 0.3 -0.32
39 AT5G63870 serine/threonine phosphatase 7 ATPP7, serine/threonine
phosphatase 7		 0.74 0.33 -0.3
40 AT3G01340 Transducin/WD40 repeat-like superfamily protein 0.74 0.32 -0.31
41 AT5G53650 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 0.74 0.33 -0.28
42 AT4G22220 SufE/NifU family protein ATISU1, ISU1 0.74 0.32 -0.29
43 AT1G01910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.74 0.33 -0.29
44 AT1G69570 Dof-type zinc finger DNA-binding family protein 0.74 0.34 -0.3
45 AT5G25760 peroxin4 peroxin4, ubiquitin-conjugating
enzyme 21		 0.74 0.34 -0.3
46 AT2G19830 SNF7 family protein SNF7.2, VPS32 0.73 0.3 -0.31
47 AT3G13520 arabinogalactan protein 12 arabinogalactan protein 12,
ATAGP12		 0.73 0.34 -0.33
48 AT5G20090 Uncharacterised protein family (UPF0041) 0.73 0.31 -0.32
49 AT1G05270 TraB family protein 0.73 0.3 -0.32
50 AT1G23260 MMS ZWEI homologue 1 MMS ZWEI homologue 1, UBIQUITIN E2
VARIANT 1A		 0.73 0.31 -0.3
51 AT5G53000 2A phosphatase associated protein of 46 kD 2A phosphatase associated protein
of 46 kD		 0.73 0.31 -0.31
52 AT3G44830 Lecithin:cholesterol acyltransferase family protein 0.73 0.3 -0.35
53 AT3G63420 Ggamma-subunit 1 Ggamma-subunit 1, ATAGG1,
Ggamma-subunit 1		 0.73 0.33 -0.31
54 AT4G01710 ARP2/3 complex 16 kDa subunit (p16-Arc) ARPC5, CROOKED 0.72 0.31 -0.34
55 AT4G25280 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.72 0.31 -0.3
56 AT1G64520 regulatory particle non-ATPase 12A regulatory particle non-ATPase 12A 0.72 0.32 -0.31
57 AT3G42790 alfin-like 3 alfin-like 3 0.72 0.31 -0.32
58 AT3G01150 polypyrimidine tract-binding protein 1 POLYPYRIMIDINE TRACT-BINDING
PROTEIN 1, polypyrimidine
tract-binding protein 1		 0.72 0.29 -0.32
59 AT1G80500 SNARE-like superfamily protein 0.72 0.32 -0.29
60 AT5G19050 alpha/beta-Hydrolases superfamily protein 0.72 0.35 -0.3
61 AT5G05820 Nucleotide-sugar transporter family protein 0.72 0.3 -0.3
62 AT5G04610 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.72 0.32 -0.34
63 AT3G05500 Rubber elongation factor protein (REF) 0.72 0.33 -0.3
64 AT2G35700 ERF family protein 38 ERF FAMILY PROTEIN 38, ERF family
protein 38		 0.72 0.31 -0.32
65 AT5G52200 phosphoprotein phosphatase inhibitors AtI-2, inhibitor-2 0.72 0.34 -0.33
66 AT1G66410 calmodulin 4 CALMODULIN 4, calmodulin 4 0.72 0.34 -0.3
67 AT2G15270 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1168 (InterPro:IPR009548); Has 1930
Blast hits to 1364 proteins in 219 species: Archae - 0;
Bacteria - 44; Metazoa - 762; Fungi - 280; Plants - 96;
Viruses - 3; Other Eukaryotes - 745 (source: NCBI BLink).		 0.72 0.33 -0.31
68 AT3G19980 flower-specific, phytochrome-associated protein phosphatase
3		 flower-specific,
phytochrome-associated protein
phosphatase 3, EMBRYO DEFECTIVE
2736, flower-specific,
phytochrome-associated protein
phosphatase 3, SERINE/THREONINE
PROTEIN PHOSPHATASE		 0.72 0.34 -0.33
69 AT5G10980 Histone superfamily protein 0.71 0.29 -0.31
70 AT4G17510 ubiquitin C-terminal hydrolase 3 ubiquitin C-terminal hydrolase 3 0.71 0.3 -0.3
71 AT5G03520 RAB GTPase homolog 8C ARABIDOPSIS RAB HOMOLOG E1D, RAB
GTPase homolog 8C, ATRABE1D, RAB
HOMOLOG E1D, RAB GTPase homolog 8C		 0.71 0.28 -0.33
72 AT4G33350 Tic22-like family protein translocon at the inner envelope
membrane of chloroplasts 22-IV,
translocon at the inner envelope
membrane of chloroplasts 22-IV		 0.71 0.32 -0.31
73 AT1G19120 Small nuclear ribonucleoprotein family protein 0.71 0.28 -0.29
74 AT3G49480 Protein with RNI-like/FBD-like domains 0.71 0.3 -0.31
75 AT3G04500 RNA-binding (RRM/RBD/RNP motifs) family protein 0.71 0.28 -0.32
76 AT2G21600 endoplasmatic reticulum retrieval protein 1B endoplasmatic reticulum retrieval
protein 1B, endoplasmatic
reticulum retrieval protein 1B		 0.71 0.31 -0.31
77 AT1G30480 D111/G-patch domain-containing protein DNA-DAMAGE-REPAIR/TOLERATION
PROTEIN 111		 0.71 0.33 -0.32
78 AT1G11130 Leucine-rich repeat protein kinase family protein SCRAMBLED, STRUBBELIG-RECEPTOR
FAMILY 9, STRUBBELIG		 -0.7 0.3 -0.34
79 AT1G63100 GRAS family transcription factor -0.7 0.32 -0.31
80 AT3G63210 Protein of unknown function (DUF581) MEDIATOR OF ABA-REGULATED DORMANCY
1		 -0.7 0.32 -0.32
81 AT2G29700 pleckstrin homologue 1 pleckstrin homologue 1, pleckstrin
homologue 1		 0.7 0.3 -0.31
82 AT2G28370 Uncharacterised protein family (UPF0497) 0.7 0.34 -0.32
83 AT1G78300 general regulatory factor 2 14-3-3 PROTEIN G-BOX FACTOR14
OMEGA, GF14 OMEGA, general
regulatory factor 2		 0.7 0.32 -0.34
84 AT3G15060 RAB GTPase homolog A1G RAB GTPase homolog A1G, RAB GTPase
homolog A1G		 0.7 0.32 -0.33
85 AT1G26580 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: ELM2 domain-containing protein
(TAIR:AT2G03470.1); Has 161 Blast hits to 161 proteins in
17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi -
4; Plants - 156; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.7 0.32 -0.32
86 AT5G58910 laccase 16 laccase 16 0.7 0.32 -0.32
87 AT3G15040 Protein of unknown function, DUF584 0.7 0.33 -0.32
88 AT5G19030 RNA-binding (RRM/RBD/RNP motifs) family protein 0.7 0.31 -0.3
89 AT5G67590 NADH-ubiquinone oxidoreductase-related FROSTBITE1 0.7 0.32 -0.32
90 AT3G20100 cytochrome P450, family 705, subfamily A, polypeptide 19 cytochrome P450, family 705,
subfamily A, polypeptide 19		 -0.69 0.32 -0.32
91 AT1G61810 beta-glucosidase 45 beta-glucosidase 45 -0.69 0.33 -0.3
92 AT4G23493 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.69 0.31 -0.3
93 AT2G34610 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G30190.1); Has 342 Blast hits
to 279 proteins in 74 species: Archae - 0; Bacteria - 7;
Metazoa - 76; Fungi - 18; Plants - 51; Viruses - 0; Other
Eukaryotes - 190 (source: NCBI BLink).		 -0.69 0.33 -0.31
94 AT1G80790 XH/XS domain-containing protein factor of DNA methylation 5 -0.69 0.33 -0.28
95 AT5G04880 pseudogene of ABC transporter family protein -0.67 0.32 -0.32
96 AT3G10740 alpha-L-arabinofuranosidase 1 ALPHA-L-ARABINOFURANOSIDASE,
ALPHA-L-ARABINOFURANOSIDASE 1,
alpha-L-arabinofuranosidase 1,
ARABIDOPSIS THALIANA
ALPHA-L-ARABINOFURANOSIDASE 1		 -0.67 0.32 -0.32
97 AT3G07540 Actin-binding FH2 (formin homology 2) family protein -0.67 0.29 -0.3
98 AT3G13065 STRUBBELIG-receptor family 4 STRUBBELIG-receptor family 4 -0.66 0.31 -0.31
99 AT5G34940 glucuronidase 3 glucuronidase 3, glucuronidase 3 -0.66 0.32 -0.32
100 AT5G23170 Protein kinase superfamily protein -0.66 0.31 -0.33
101 AT4G23870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G11020.1); Has 12 Blast hits
to 12 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.65 0.33 -0.3
102 AT2G25000 WRKY DNA-binding protein 60 ATWRKY60, WRKY DNA-binding protein
60		 -0.64 0.3 -0.33
103 AT1G17870 ethylene-dependent gravitropism-deficient and
yellow-green-like 3		 ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3,
ETHYLENE-DEPENDENT
GRAVITROPISM-DEFICIENT AND
YELLOW-GREEN-LIKE 3		 -0.64 0.31 -0.31
104 AT1G04050 homolog of SU(var)3-9 1 SET DOMAIN PROTEIN 13, homolog of
SU(var)3-9 1		 -0.64 0.32 -0.31
105 AT2G25270 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
18 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G12400.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 -0.64 0.32 -0.32
106 AT5G52160 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.63 0.33 -0.31
107 AT5G65210 bZIP transcription factor family protein TGA1 -0.63 0.31 -0.32
108 AT4G00340 receptor-like protein kinase 4 receptor-like protein kinase 4 -0.63 0.34 -0.3
109 AT4G14920 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc
finger protein		 -0.63 0.31 -0.3
110 AT5G39700 myb domain protein 89 myb domain protein 89, myb domain
protein 89		 -0.62 0.32 -0.3
111 AT5G61190 putative endonuclease or glycosyl hydrolase with C2H2-type
zinc finger domain		 -0.62 0.31 -0.31
112 AT2G40900 nodulin MtN21 /EamA-like transporter family protein -0.61 0.32 -0.31
113 AT3G45440 Concanavalin A-like lectin protein kinase family protein -0.61 0.3 -0.32
114 AT3G12960 unknown protein; Has 44 Blast hits to 44 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.61 0.31 -0.33
115 AT5G01840 ovate family protein 1 ARABIDOPSIS THALIANA OVATE FAMILY
PROTEIN 1, ovate family protein 1		 -0.6 0.32 -0.29
116 AT5G52390 PAR1 protein -0.6 0.32 -0.34
117 AT3G49300 proline-rich family protein -0.6 0.32 -0.32
118 AT2G19250 pseudogene, similar to Magnesium-chelatase subunit chlD,
chloroplast precursor (Mg- protoporphyrin IX chelatase)
(Mg-chelatase subunit D). (Common tobacco), similar to
SP|O24133 Magnesium-chelatase subunit chlD, chloroplast
precursor (Mg-protoporphyrin IX chelatase) (Mg-chelatase
subunit D) {Nicotiana tabacum}; blastp match of 78%
identity and 5.0e-07 P-value to SP|O24133|CHLD_TOBAC
Magnesium-chelatase subunit chlD, chloroplast precursor
(Mg- protoporphyrin IX chelatase) (Mg-chelatase subunit D).
(Common tobacco) {Nicotiana tabacum}		 -0.6 0.34 -0.3
119 AT2G16090 RING/U-box superfamily protein ARIADNE 2, ARABIDOPSIS ARIADNE 2 -0.59 0.32 -0.32
120 AT1G17590 nuclear factor Y, subunit A8 nuclear factor Y, subunit A8 -0.59 0.31 -0.31
121 AT4G18080 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
plant-type cell wall; EXPRESSED IN: stem; BEST Arabidopsis
thaliana protein match is: Protein of unknown function
(DUF1184) (TAIR:AT3G27900.1); Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 -0.59 0.29 -0.32
122 AT3G54220 GRAS family transcription factor SCARECROW, SHOOT GRAVITROPISM 1 -0.59 0.3 -0.31
123 AT1G11710 Pentatricopeptide repeat (PPR) superfamily protein -0.59 0.3 -0.33
124 AT3G43920 dicer-like 3 DICER-LIKE 3, dicer-like 3 -0.59 0.32 -0.32
125 AT4G21550 VP1/ABI3-like 3 VP1/ABI3-like 3 -0.58 0.31 -0.33
126 AT4G14530 BEST Arabidopsis thaliana protein match is: AGAMOUS-like 97
(TAIR:AT1G46408.1); Has 21 Blast hits to 21 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.58 0.31 -0.29
127 AT1G14970 O-fucosyltransferase family protein -0.58 0.31 -0.3
128 AT5G57810 tetraspanin15 tetraspanin15 -0.58 0.3 -0.3
129 AT5G62120 response regulator 23 response regulator 23, response
regulator 23		 -0.58 0.29 -0.32