AT1G28280 : -
Query Information
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AGICode AT1G28280
Description VQ motif-containing protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G28280 VQ motif-containing protein 1 0.3 -0.32
2 AT5G17640 Protein of unknown function (DUF1005) 0.86 0.33 -0.31
3 AT3G55950 CRINKLY4 related 3 ATCRR3, CRINKLY4 related 3 0.84 0.3 -0.32
4 AT3G13430 RING/U-box superfamily protein 0.83 0.33 -0.29
5 AT5G11680 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cytosol, plasma
membrane; EXPRESSED IN: 26 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
WW-domain-binding protein (InterPro:IPR018826); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.82 0.34 -0.31
6 AT5G03380 Heavy metal transport/detoxification superfamily protein 0.82 0.3 -0.32
7 AT4G32040 KNOTTED1-like homeobox gene 5 KNOTTED1-like homeobox gene 5 0.82 0.3 -0.31
8 AT2G29890 villin-like 1 ATVLN1, villin 1 -0.81 0.32 -0.31
9 AT5G60620 glycerol-3-phosphate acyltransferase 9 glycerol-3-phosphate
acyltransferase 9		 0.81 0.31 -0.31
10 AT5G07810 SNF2 domain-containing protein / helicase domain-containing
protein / HNH endonuclease domain-containing protein		 -0.81 0.32 -0.3
11 AT2G22480 phosphofructokinase 5 phosphofructokinase 5 0.81 0.32 -0.31
12 AT2G36330 Uncharacterised protein family (UPF0497) 0.81 0.3 -0.32
13 AT2G42680 multiprotein bridging factor 1A ARABIDOPSIS THALIANA MULTIPROTEIN
BRIDGING FACTOR 1A, multiprotein
bridging factor 1A		 0.81 0.31 -0.32
14 AT3G54840 Ras-related small GTP-binding family protein ARA-6, ARA6, ATRAB5C, ATRABF1,
RABF1		 0.81 0.32 -0.32
15 AT4G15800 ralf-like 33 ralf-like 33 0.81 0.32 -0.33
16 AT5G67490 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1674 (InterPro:IPR012875); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.8 0.29 -0.3
17 AT4G38930 Ubiquitin fusion degradation UFD1 family protein 0.8 0.31 -0.33
18 AT5G54500 flavodoxin-like quinone reductase 1 flavodoxin-like quinone reductase
1		 0.8 0.32 -0.31
19 AT3G17410 Protein kinase superfamily protein 0.79 0.32 -0.29
20 AT1G76630 Tetratricopeptide repeat (TPR)-like superfamily protein -0.79 0.32 -0.31
21 AT3G09085 Protein of unknown function (DUF962) 0.79 0.33 -0.32
22 AT3G06420 Ubiquitin-like superfamily protein autophagy 8h 0.79 0.3 -0.31
23 AT3G51990 Protein kinase superfamily protein 0.79 0.28 -0.29
24 AT3G55140 Pectin lyase-like superfamily protein 0.79 0.31 -0.34
25 AT3G06760 Drought-responsive family protein 0.78 0.33 -0.33
26 AT5G52210 GTP-binding protein 1 ATARLB1, GTP-binding protein 1,
GTP-binding protein 1		 0.78 0.34 -0.31
27 AT1G77110 Auxin efflux carrier family protein PIN-FORMED 6 -0.78 0.33 -0.32
28 AT3G11780 MD-2-related lipid recognition domain-containing protein /
ML domain-containing protein		 0.78 0.32 -0.31
29 AT1G12140 flavin-monooxygenase glucosinolate S-oxygenase 5 flavin-monooxygenase glucosinolate
S-oxygenase 5		 0.78 0.31 -0.32
30 AT1G79590 syntaxin of plants 52 ATSYP52, syntaxin of plants 52 0.78 0.32 -0.31
31 AT1G17080 Ribosomal protein L18ae family 0.78 0.32 -0.31
32 AT5G55930 oligopeptide transporter 1 ARABIDOPSIS THALIANA OLIGOPEPTIDE
TRANSPORTER 1, oligopeptide
transporter 1		 0.77 0.3 -0.33
33 AT1G26830 cullin 3 cullin 3, cullin 3A, cullin 3,
cullin 3A		 0.77 0.31 -0.3
34 AT3G61980 serine protease inhibitor, Kazal-type family protein 0.77 0.32 -0.31
35 AT3G57480 zinc finger (C2H2 type, AN1-like) family protein 0.77 0.31 -0.33
36 AT3G16060 ATP binding microtubule motor family protein -0.77 0.31 -0.31
37 AT3G61790 Protein with RING/U-box and TRAF-like domains 0.77 0.33 -0.3
38 AT1G15670 Galactose oxidase/kelch repeat superfamily protein 0.77 0.32 -0.3
39 AT1G28600 GDSL-like Lipase/Acylhydrolase superfamily protein 0.77 0.34 -0.31
40 AT5G32440 Ubiquitin system component Cue protein 0.77 0.31 -0.3
41 AT3G30775 Methylenetetrahydrofolate reductase family protein AT-POX, ATPDH, ARABIDOPSIS
THALIANA PROLINE OXIDASE, EARLY
RESPONSIVE TO DEHYDRATION 5,
proline dehydrogenase 1, PRO1,
PROLINE DEHYDROGENASE		 0.76 0.31 -0.33
42 AT5G59140 BTB/POZ domain-containing protein 0.76 0.31 -0.3
43 AT4G30270 xyloglucan endotransglucosylase/hydrolase 24 MERISTEM 5, meristem-5, SENESCENCE
4, xyloglucan
endotransglucosylase/hydrolase 24		 0.76 0.31 -0.32
44 AT4G05590 CONTAINS InterPro DOMAIN/s: Uncharacterised protein family
UPF0041 (InterPro:IPR005336); BEST Arabidopsis thaliana
protein match is: Uncharacterised protein family (UPF0041)
(TAIR:AT4G22310.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.76 0.32 -0.32
45 AT1G20870 HSP20-like chaperones superfamily protein -0.76 0.34 -0.31
46 AT4G25810 xyloglucan endotransglycosylase 6 xyloglucan
endotransglucosylase/hydrolase 23,
xyloglucan endotransglycosylase 6		 0.76 0.31 -0.34
47 AT2G38610 RNA-binding KH domain-containing protein 0.76 0.32 -0.31
48 AT1G15400 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G80180.1); Has 82 Blast
hits to 82 proteins in 16 species: Archae - 0; Bacteria -
4; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other
Eukaryotes - 3 (source: NCBI BLink).		 0.76 0.32 -0.31
49 AT1G71170 6-phosphogluconate dehydrogenase family protein 0.76 0.33 -0.31
50 AT1G67690 Zincin-like metalloproteases family protein -0.76 0.3 -0.31
51 AT1G02000 UDP-D-glucuronate 4-epimerase 2 UDP-D-glucuronate 4-epimerase 2 0.75 0.3 -0.33
52 AT1G09740 Adenine nucleotide alpha hydrolases-like superfamily
protein		 0.75 0.31 -0.3
53 AT5G11970 Protein of unknown function (DUF3511) 0.75 0.32 -0.32
54 AT5G03070 importin alpha isoform 9 importin alpha isoform 9 -0.75 0.31 -0.32
55 AT4G14490 SMAD/FHA domain-containing protein -0.75 0.33 -0.32
56 AT1G11310 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 2,
MILDEW RESISTANCE LOCUS O 2,
POWDERY MILDEW RESISTANT 2		 0.75 0.31 -0.31
57 AT1G16670 Protein kinase superfamily protein 0.75 0.33 -0.33
58 AT2G16510 ATPase, F0/V0 complex, subunit C protein 0.75 0.3 -0.31
59 AT5G63920 topoisomerase 3alpha AtTOP3alpha, topoisomerase 3alpha -0.75 0.29 -0.3
60 AT1G06400 Ras-related small GTP-binding family protein ARA-2, ARA2, ATRAB11E, ARABIDOPSIS
THALIANA RAB GTPASE HOMOLOG A1A		 0.75 0.33 -0.32
61 AT3G27560 Protein kinase superfamily protein ATN1 0.74 0.32 -0.35
62 AT1G63100 GRAS family transcription factor -0.74 0.33 -0.31
63 AT5G58840 Subtilase family protein 0.74 0.31 -0.32
64 AT2G37300 unknown protein; Has 93 Blast hits to 62 proteins in 29
species: Archae - 0; Bacteria - 6; Metazoa - 13; Fungi -
19; Plants - 25; Viruses - 0; Other Eukaryotes - 30
(source: NCBI BLink).		 ATP-binding cassette I16 -0.74 0.3 -0.31
65 AT2G27040 Argonaute family protein ARGONAUTE 4, OVEREXPRESSOR OF
CATIONIC PEROXIDASE 11		 -0.74 0.31 -0.32
66 AT1G79880 RNA recognition motif (RRM)-containing protein -0.74 0.3 -0.33
67 AT2G27580 A20/AN1-like zinc finger family protein 0.74 0.29 -0.33
68 AT3G15550 unknown protein; Has 25732 Blast hits to 16979 proteins in
961 species: Archae - 144; Bacteria - 1801; Metazoa -
12681; Fungi - 1868; Plants - 912; Viruses - 94; Other
Eukaryotes - 8232 (source: NCBI BLink).		 -0.74 0.32 -0.3
69 AT4G13790 SAUR-like auxin-responsive protein family 0.73 0.32 -0.32
70 AT5G13000 glucan synthase-like 12 glucan synthase-like 12, callose
synthase 3, gsl12, glucan
synthase-like 12		 -0.73 0.3 -0.33
71 AT5G46780 VQ motif-containing protein 0.73 0.32 -0.3
72 AT4G26710 ATPase, V0 complex, subunit E 0.73 0.32 -0.33
73 AT5G63540 Domain of unknown function (DUF1767) ATRMI1, BLAP75, RECQ MEDIATED
INSTABILITY 1		 -0.73 0.3 -0.29
74 AT5G59420 OSBP(oxysterol binding protein)-related protein 3C OSBP(oxysterol binding
protein)-related protein 3C		 0.73 0.33 -0.3
75 AT4G37880 LisH/CRA/RING-U-box domains-containing protein 0.73 0.29 -0.3
76 AT1G34370 C2H2 and C2HC zinc fingers superfamily protein sensitive to proton rhizotoxicity
1		 0.73 0.32 -0.32
77 AT4G24790 AAA-type ATPase family protein -0.73 0.33 -0.29
78 AT1G64740 alpha-1 tubulin alpha-1 tubulin 0.73 0.34 -0.29
79 AT1G11280 S-locus lectin protein kinase family protein -0.73 0.32 -0.32
80 AT2G25310 Protein of unknown function (DUF2012) 0.73 0.31 -0.32
81 AT5G55290 ATPase, V0 complex, subunit E 0.73 0.33 -0.33
82 AT4G27180 kinesin 2 kinesin 2, KINESIN-LIKE PROTEIN IN
ARABIDOPSIS THALIANA B		 -0.72 0.31 -0.3
83 AT3G24515 ubiquitin-conjugating enzyme 37 ubiquitin-conjugating enzyme 37 -0.72 0.31 -0.34
84 AT4G14970 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 6 growth stages; Has 257 Blast hits to 164 proteins
in 70 species: Archae - 0; Bacteria - 4; Metazoa - 189;
Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 26
(source: NCBI BLink).		 -0.72 0.31 -0.33
85 AT3G29375 XH domain-containing protein -0.72 0.32 -0.31
86 AT2G35310 Transcriptional factor B3 family protein -0.72 0.33 -0.32
87 AT3G26050 TPX2 (targeting protein for Xklp2) protein family -0.71 0.32 -0.31
88 AT4G35420 dihydroflavonol 4-reductase-like1 dihydroflavonol 4-reductase-like1,
tetraketide alpha-pyrone reductase
1		 -0.71 0.31 -0.3
89 AT5G48360 Actin-binding FH2 (formin homology 2) family protein -0.71 0.31 -0.32
90 AT4G38780 Pre-mRNA-processing-splicing factor -0.71 0.3 -0.3
91 AT1G19060 Protein of unknown function (DUF626) -0.71 0.32 -0.31
92 AT5G37010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 22 plant structures; EXPRESSED DURING: 13 growth
stages; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT1G65710.1); Has 6746 Blast hits to 5259
proteins in 486 species: Archae - 7; Bacteria - 485;
Metazoa - 3508; Fungi - 577; Plants - 378; Viruses - 50;
Other Eukaryotes - 1741 (source: NCBI BLink).		 -0.71 0.31 -0.34
93 AT1G43010 Pentatricopeptide repeat (PPR) superfamily protein -0.7 0.3 -0.31
94 AT3G25560 NSP-interacting kinase 2 NSP-interacting kinase 2 -0.7 0.31 -0.32
95 AT3G25950 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 -0.69 0.3 -0.32
96 AT2G42410 zinc finger protein 11 ZINC FINGER PROTEIN 11, zinc
finger protein 11		 -0.69 0.33 -0.33
97 AT5G20130 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.69 0.33 -0.32
98 AT4G29080 phytochrome-associated protein 2 indole-3-acetic acid inducible 27,
phytochrome-associated protein 2		 -0.69 0.31 -0.3
99 AT3G54350 Forkhead-associated (FHA) domain-containing protein embryo defective 1967 -0.69 0.33 -0.32
100 AT4G33905 Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein -0.68 0.33 -0.33
101 AT1G67050 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G38320.1); Has 617 Blast hits
to 318 proteins in 80 species: Archae - 0; Bacteria - 16;
Metazoa - 141; Fungi - 62; Plants - 128; Viruses - 2; Other
Eukaryotes - 268 (source: NCBI BLink).		 -0.68 0.28 -0.34
102 AT5G04140 glutamate synthase 1 FERREDOXIN-DEPENDENT GLUTAMATE
SYNTHASE, FERREDOXIN-DEPENDENT
GLUTAMATE SYNTHASE 1, glutamate
synthase 1, GLUS		 -0.68 0.28 -0.31
103 AT1G09450 Protein kinase superfamily protein AtHaspin, Haspin-related gene -0.68 0.33 -0.31
104 AT1G59540 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 ZCF125 -0.68 0.31 -0.31
105 AT1G74160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G18620.1); Has 3407 Blast hits
to 2217 proteins in 314 species: Archae - 0; Bacteria -
264; Metazoa - 1296; Fungi - 318; Plants - 346; Viruses -
34; Other Eukaryotes - 1149 (source: NCBI BLink).		 -0.68 0.3 -0.31
106 AT1G30610 pentatricopeptide (PPR) repeat-containing protein EMBRYO DEFECTIVE 2279, EMBRYO
DEFECTIVE 88		 -0.68 0.32 -0.33
107 AT2G48120 pale cress protein (PAC) PALE CRESS -0.68 0.32 -0.3
108 AT2G23530 Zinc-finger domain of monoamine-oxidase A repressor R1 -0.67 0.34 -0.32
109 AT3G17360 phragmoplast orienting kinesin 1 phragmoplast orienting kinesin 1 -0.67 0.3 -0.32
110 AT1G54440 Polynucleotidyl transferase, ribonuclease H fold protein
with HRDC domain		 -0.67 0.29 -0.31
111 AT4G04970 glucan synthase-like 1 GLUCAN SYNTHASE LIKE 1, GLUCAN
SYNTHASE LIKE-1, GSL01, glucan
synthase-like 1		 -0.67 0.31 -0.31
112 AT5G44800 chromatin remodeling 4 chromatin remodeling 4, PICKLE
RELATED 1		 -0.67 0.3 -0.29
113 AT5G03450 Transducin/WD40 repeat-like superfamily protein -0.67 0.31 -0.29
114 AT5G47040 lon protease 2 lon protease 2 -0.67 0.3 -0.32
115 AT5G57590 adenosylmethionine-8-amino-7-oxononanoate transaminases biotin auxotroph 1 -0.67 0.34 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
116 C0016 S-Adenosylmethionine S-Adenosyl-L-methionine S-Adenosyl-L-methionine ethylene biosynthesis I (plants),
scopoletin biosynthesis,
quercetinsulphates biosynthesis,
siroheme biosynthesis,
gibberellin inactivation II (methylation),
suberin biosynthesis,
volatile benzenoid biosynthesis I (ester formation),
S-adenosyl-L-methionine cycle II,
methylhalides biosynthesis (plants),
S-methylmethionine cycle,
ubiquinol-9 biosynthesis (eukaryotic),
nicotianamine biosynthesis,
methionine biosynthesis II,
spermine biosynthesis,
choline biosynthesis II,
diphthamide biosynthesis,
homogalacturonan biosynthesis,
phosphatidylcholine biosynthesis II,
methylquercetin biosynthesis,
plastoquinol biosynthesis,
chlorophyllide a biosynthesis I,
ferulate and sinapate biosynthesis,
ubiquinol-10 biosynthesis (eukaryotic),
phenylpropanoid biosynthesis,
free phenylpropanoid acid biosynthesis,
seleno-amino acid detoxification and volatilization I,
plant sterol biosynthesis,
lipoate biosynthesis and incorporation I,
methyl indole-3-acetate interconversion,
cyclopropane and cyclopropene fatty acid biosynthesis,
spermidine biosynthesis I,
thiamine biosynthesis II,
methionine salvage pathway,
spermidine hydroxycinnamic acid conjugates biosynthesis,
simple coumarins biosynthesis,
phosphatidylcholine biosynthesis IV,
glutathione-mediated detoxification II,
S-adenosyl-L-methionine biosynthesis,
methionine degradation I (to homocysteine),
phosphatidylcholine biosynthesis III,
phylloquinol biosynthesis,
choline biosynthesis I,
biotin biosynthesis II,
vitamin E biosynthesis 		-0.76 0.47 -0.45 C0016