AT1G56570 : PENTATRICOPEPTIDE REPEAT PROTEIN FOR GERMINATION ON NaCl.....
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G56570
Description Tetratricopeptide repeat (TPR)-like superfamily protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G56570 Tetratricopeptide repeat (TPR)-like superfamily protein PENTATRICOPEPTIDE REPEAT PROTEIN
FOR GERMINATION ON NaCl		 1 0.33 -0.31
2 AT1G21650 Preprotein translocase SecA family protein SECA2 0.68 0.34 -0.32
3 AT5G16510 Alpha-1,4-glucan-protein synthase family protein reversibly glycosylated
polypeptide 5, reversibly
glycosylated protein 5		 -0.67 0.3 -0.31
4 AT4G28760 Protein of unknown function (DUF3741) 0.67 0.35 -0.3
5 AT2G29960 cyclophilin 5 ARABIDOPSIS THALIANA CYCLOPHILIN
5, CYCLOPHILIN 19-4, cyclophilin 5		 -0.66 0.34 -0.33
6 AT1G30010 Intron maturase, type II family protein 0.65 0.32 -0.29
7 AT2G17110 Protein of unknown function (DUF630 and DUF632) 0.65 0.32 -0.31
8 AT5G51660 cleavage and polyadenylation specificity factor 160 ATCPSF160, cleavage and
polyadenylation specificity factor
160		 0.64 0.32 -0.31
9 AT1G79030 Chaperone DnaJ-domain superfamily protein 0.64 0.31 -0.31
10 AT3G01740 Mitochondrial ribosomal protein L37 -0.64 0.34 -0.33
11 AT1G13400 C2H2 and C2HC zinc fingers superfamily protein JAGGED-LIKE, NUBBIN 0.64 0.3 -0.3
12 AT1G40230 transposable element gene 0.64 0.32 -0.29
13 AT5G45280 Pectinacetylesterase family protein -0.63 0.3 -0.36
14 ATCG00560 photosystem II reaction center protein L photosystem II reaction center
protein L		 0.63 0.31 -0.31
15 AT1G31814 FRIGIDA like 2 FRIGIDA like 2 0.63 0.32 -0.32
16 AT5G52230 methyl-CPG-binding domain protein 13 methyl-CPG-binding domain protein
13		 0.63 0.32 -0.33
17 ATCG00550 photosystem II reaction center protein J photosystem II reaction center
protein J		 0.62 0.32 -0.32
18 AT5G53660 growth-regulating factor 7 growth-regulating factor 7,
growth-regulating factor 7		 0.61 0.33 -0.3
19 AT4G29800 PATATIN-like protein 8 PLA IVD, PATATIN-like protein 8 -0.61 0.3 -0.32
20 AT1G64020 Serine protease inhibitor (SERPIN) family protein 0.61 0.31 -0.32
21 AT1G54990 alpha/beta-Hydrolases superfamily protein AUXIN RESISTANT 4, REDUCED ROOT
GRAVITROPISM, REDUCED ROOT
GRAVITROPISM 1		 -0.61 0.3 -0.33
22 AT3G08630 Protein of unknown function (DUF3411) -0.61 0.33 -0.31
23 AT1G31030 transposable element gene 0.6 0.33 -0.3
24 AT2G31780 RING/U-box superfamily protein ARIADNE 11, ARABIDOPSIS ARIADNE 11 0.6 0.33 -0.32
25 AT2G17020 F-box/RNI-like superfamily protein 0.6 0.32 -0.34
26 AT3G07400 lipase class 3 family protein 0.59 0.31 -0.31
27 AT4G05310 Ubiquitin-like superfamily protein -0.59 0.3 -0.31
28 AT5G63135 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.59 0.33 -0.29
29 AT2G37610 unknown protein; Has 21 Blast hits to 21 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.58 0.32 -0.3
30 AT2G04650 ADP-glucose pyrophosphorylase family protein -0.58 0.32 -0.33
31 AT2G32000 DNA topoisomerase, type IA, core 0.58 0.3 -0.33
32 AT5G48990 Galactose oxidase/kelch repeat superfamily protein 0.58 0.31 -0.32
33 AT5G06720 peroxidase 2 peroxidase 2, peroxidase 2 -0.58 0.31 -0.3
34 AT1G74630 Tetratricopeptide repeat (TPR)-like superfamily protein 0.58 0.31 -0.33
35 AT1G02020 nitroreductase family protein 0.57 0.31 -0.34
36 AT1G26590 C2H2-like zinc finger protein 0.57 0.33 -0.3
37 AT4G34050 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 caffeoyl coenzyme A
O-methyltransferase 1		 -0.57 0.31 -0.29
38 AT4G03950 Nucleotide/sugar transporter family protein 0.57 0.32 -0.3
39 AT1G55410 pseudogene, CHP-rich zinc finger protein, putative, similar
to putative CHP-rich zinc finger protein GB:CAB77744
GI:7268217 from (Arabidopsis thaliana)		 0.57 0.34 -0.31
40 AT4G38760 Protein of unknown function (DUF3414) 0.57 0.34 -0.32
41 AT3G26010 Galactose oxidase/kelch repeat superfamily protein 0.57 0.31 -0.32
42 AT2G21870 copper ion binding;cobalt ion binding;zinc ion binding MALE GAMETOPHYTE DEFECTIVE 1 -0.57 0.33 -0.34
43 AT1G17580 myosin 1 ARABIDOPSIS MYOSIN 1, myosin 1,
MYOSIN XI 1		 0.57 0.3 -0.32
44 AT2G44990 carotenoid cleavage dioxygenase 7 ATCCD7, carotenoid cleavage
dioxygenase 7, MAX3		 0.57 0.32 -0.33
45 AT2G03340 WRKY DNA-binding protein 3 WRKY DNA-binding protein 3 0.57 0.32 -0.33
46 AT1G74620 RING/U-box superfamily protein 0.56 0.3 -0.32
47 AT2G40030 nuclear RNA polymerase D1B ATNRPD1B, DEFECTIVE IN MERISTEM
SILENCING 5, DRD3, nuclear RNA
polymerase D1B, NRPE1		 0.56 0.28 -0.3
48 AT3G10580 Homeodomain-like superfamily protein 0.56 0.31 -0.33
49 AT4G36550 ARM repeat superfamily protein 0.56 0.33 -0.3
50 AT4G29735 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Uncharacterised protein family UPF0197
(InterPro:IPR007915); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.56 0.32 -0.31
51 AT1G43320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 6 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.56 0.34 -0.34
52 AT4G01500 AP2/B3-like transcriptional factor family protein NGATHA4 0.56 0.33 -0.3
53 AT4G39753 Galactose oxidase/kelch repeat superfamily protein -0.55 0.31 -0.32
54 AT1G55640 prenylated RAB acceptor 1.G1 prenylated RAB acceptor 1.G1 0.55 0.31 -0.32
55 AT2G30870 glutathione S-transferase PHI 10 ARABIDOPSIS THALIANA GLUTATHIONE
S-TRANSFERASE PHI 10, ATGSTF4,
EARLY DEHYDRATION-INDUCED 13,
glutathione S-transferase PHI 10		 -0.55 0.3 -0.31
56 AT5G54890 RNA-binding CRS1 / YhbY (CRM) domain-containing protein 0.55 0.32 -0.34
57 AT5G04380 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.55 0.32 -0.34
58 AT2G27220 BEL1-like homeodomain 5 BEL1-like homeodomain 5 0.54 0.33 -0.32
59 AT3G60070 Major facilitator superfamily protein 0.54 0.31 -0.31
60 AT4G05050 ubiquitin 11 ubiquitin 11 -0.54 0.33 -0.31
61 AT2G25930 hydroxyproline-rich glycoprotein family protein EARLY FLOWERING 3, PYK20 0.54 0.31 -0.31
62 AT4G37230 Photosystem II manganese-stabilising protein (PsbO) family 0.54 0.33 -0.32
63 AT3G59730 Concanavalin A-like lectin protein kinase family protein -0.54 0.32 -0.32
64 AT5G53470 acyl-CoA binding protein 1 ACYL-COA BINDING PROTEIN, acyl-CoA
binding protein 1		 -0.54 0.28 -0.31
65 AT2G30860 glutathione S-transferase PHI 9 ATGSTF7, glutathione S-transferase
PHI 9, GLUTTR, glutathione
S-transferase PHI 9		 -0.53 0.33 -0.33
66 AT5G05760 syntaxin of plants 31 ATSED5, ATSYP31, T-SNARE SED 5,
syntaxin of plants 31		 -0.53 0.32 -0.32
67 AT1G74510 Galactose oxidase/kelch repeat superfamily protein -0.53 0.31 -0.32
68 AT2G45520 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; EXPRESSED IN: 23
plant structures; EXPRESSED DURING: 13 growth stages; Has
260 Blast hits to 238 proteins in 75 species: Archae - 0;
Bacteria - 6; Metazoa - 94; Fungi - 40; Plants - 38;
Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).		 -0.51 0.3 -0.32
69 AT4G05460 RNI-like superfamily protein -0.51 0.32 -0.31
70 AT1G30070 SGS domain-containing protein -0.5 0.33 -0.31
71 AT4G02450 HSP20-like chaperones superfamily protein -0.5 0.31 -0.3
72 AT1G63450 root hair specific 8 root hair specific 8 -0.5 0.31 -0.32
73 AT3G62480 transposable element gene -0.5 0.32 -0.32
74 AT1G10800 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: inflorescence meristem,
hypocotyl, root, flower; EXPRESSED DURING: petal
differentiation and expansion stage; Has 23 Blast hits to
23 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes
- 1 (source: NCBI BLink).		 -0.5 0.31 -0.32
75 AT1G37140 MEI2 C-terminal RRM only like 1 MEI2 C-terminal RRM only like 1 -0.49 0.31 -0.33
76 AT1G27130 glutathione S-transferase tau 13 glutathione S-transferase tau 13,
GLUTATHIONE S-TRANSFERASE 12,
glutathione S-transferase tau 13		 -0.49 0.32 -0.31
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
77 C0153 Monogalactosyldiacylgycerol-34:6 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		0.78 0.47 -0.46 C0153
78 C0185 MST_3139.9 - - - -0.66 0.45 -0.43
79 C0080 Digalactosyldiacylglycerol-34:6 - Digalactosyldiacylglycerol-34:6 triacylglycerol degradation,
linoleate biosynthesis I,
glycolipid biosynthesis,
glutathione redox reactions I 		0.61 0.44 -0.43 C0080