AT5G04190 : phytochrome kinase substrate 4
Query Information
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AGICode AT5G04190
Description phytochrome kinase substrate 4
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G04190 phytochrome kinase substrate 4 phytochrome kinase substrate 4 1 0.32 -0.31
2 AT3G52290 IQ-domain 3 IQ-domain 3 0.8 0.34 -0.3
3 AT5G07590 Transducin/WD40 repeat-like superfamily protein 0.76 0.31 -0.3
4 AT5G49170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G06840.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.75 0.31 -0.29
5 AT5G16480 Phosphotyrosine protein phosphatases superfamily protein AtPFA-DSP5, plant and fungi
atypical dual-specificity
phosphatase 5		 0.73 0.31 -0.31
6 AT3G01490 Protein kinase superfamily protein 0.71 0.31 -0.34
7 AT2G39710 Eukaryotic aspartyl protease family protein -0.71 0.3 -0.3
8 AT3G16030 lectin protein kinase family protein CALLUS EXPRESSION OF RBCS 101 -0.7 0.32 -0.31
9 AT4G36410 ubiquitin-conjugating enzyme 17 ubiquitin-conjugating enzyme 17 0.7 0.31 -0.28
10 AT1G14140 Mitochondrial substrate carrier family protein 0.69 0.3 -0.3
11 AT2G25800 Protein of unknown function (DUF810) 0.68 0.32 -0.33
12 AT3G08870 Concanavalin A-like lectin protein kinase family protein -0.68 0.32 -0.33
13 AT3G06060 NAD(P)-binding Rossmann-fold superfamily protein TSC10A 0.68 0.32 -0.31
14 AT1G14670 Endomembrane protein 70 protein family 0.67 0.32 -0.33
15 AT4G23260 cysteine-rich RLK (RECEPTOR-like protein kinase) 18 cysteine-rich RLK (RECEPTOR-like
protein kinase) 18		 -0.67 0.33 -0.31
16 AT1G18400 BR enhanced expression 1 BR enhanced expression 1 0.67 0.32 -0.32
17 AT1G56590 Clathrin adaptor complexes medium subunit family protein ZIG SUPPRESSOR 4 0.66 0.32 -0.31
18 AT1G15310 signal recognition particle 54 kDa subunit signal recognition particle 54 kDa
subunit, SIGNAL RECOGNITION
PARTICLE 54 KDA SUBUNIT		 -0.66 0.32 -0.34
19 AT1G45170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G42960.1); Has 62 Blast hits
to 62 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.65 0.31 -0.31
20 AT3G26030 serine/threonine protein phosphatase 2A 55 kDa regulatory
subunit B prime delta		 serine/threonine protein
phosphatase 2A 55 kDa regulatory
subunit B prime delta		 0.65 0.33 -0.33
21 AT4G14000 Putative methyltransferase family protein 0.65 0.33 -0.29
22 AT4G17245 RING/U-box superfamily protein 0.64 0.34 -0.29
23 AT2G02470 alfin-like 6 alfin-like 6 0.64 0.32 -0.3
24 AT3G15410 Leucine-rich repeat (LRR) family protein 0.64 0.31 -0.32
25 AT3G12920 SBP (S-ribonuclease binding protein) family protein BOI-related gene 3 0.64 0.32 -0.29
26 AT3G09780 CRINKLY4 related 1 ATCRR1, CRINKLY4 related 1 0.64 0.31 -0.32
27 AT5G64410 oligopeptide transporter 4 ARABIDOPSIS THALIANA OLIGOPEPTIDE
TRANSPORTER 4, oligopeptide
transporter 4		 0.63 0.33 -0.32
28 AT3G60530 GATA transcription factor 4 GATA transcription factor 4 0.63 0.33 -0.31
29 AT2G17880 Chaperone DnaJ-domain superfamily protein 0.63 0.33 -0.29
30 AT5G02440 unknown protein; Has 71 Blast hits to 71 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.63 0.32 -0.32
31 AT4G04840 methionine sulfoxide reductase B6 methionine sulfoxide reductase B6,
methionine sulfoxide reductase B6		 0.63 0.3 -0.31
32 AT2G32720 cytochrome B5 isoform B ARABIDOPSIS CYTOCHROME B5 ISOFORM
B, B5 #4, cytochrome B5 isoform B		 0.62 0.31 -0.31
33 AT4G34580 Sec14p-like phosphatidylinositol transfer family protein CAN OF WORMS1, SHORT ROOT HAIR 1 0.62 0.32 -0.32
34 AT5G12270 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.62 0.3 -0.32
35 AT3G53980 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.62 0.31 -0.3
36 AT5G38780 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.62 0.31 -0.34
37 AT2G39980 HXXXD-type acyl-transferase family protein 0.61 0.33 -0.31
38 AT3G56750 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G41150.2); Has 128 Blast hits
to 128 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 117; Viruses - 0; Other
Eukaryotes - 11 (source: NCBI BLink).		 0.61 0.32 -0.31
39 AT1G21830 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF740 (InterPro:IPR008004); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G44608.1); Has 49 Blast hits to 49 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.61 0.31 -0.29
40 AT5G42080 dynamin-like protein dynamin-like protein, ADL1A, AG68,
dynamin-like protein,
DYNAMIN-RELATED PROTEIN 1A, RADIAL
SWELLING 9		 0.6 0.33 -0.33
41 AT5G62280 Protein of unknown function (DUF1442) 0.6 0.33 -0.32
42 AT3G07490 ARF-GAP domain 11 ARF-GAP domain 11, AtCML3,
calmodulin-like 3		 0.6 0.32 -0.32
43 AT4G20880 ethylene-responsive nuclear protein / ethylene-regulated
nuclear protein (ERT2)		 -0.6 0.29 -0.36
44 AT2G15680 Calcium-binding EF-hand family protein AtCML30, calmodulin-like 30 0.6 0.34 -0.33
45 AT4G21050 Dof-type zinc finger domain-containing protein -0.58 0.3 -0.32
46 AT1G45616 receptor like protein 6 receptor like protein 6, receptor
like protein 6		 -0.58 0.32 -0.31
47 AT1G53540 HSP20-like chaperones superfamily protein -0.56 0.29 -0.33
48 AT5G47530 Auxin-responsive family protein -0.55 0.31 -0.33
49 AT1G49000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: stem; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT3G18560.1); Has
105 Blast hits to 105 proteins in 13 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.55 0.3 -0.31
50 AT2G47670 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.53 0.29 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
51 C0231 Serine D,L-Serine D-Serine; L-Serine sphingolipid biosynthesis (plants),
folate polyglutamylation,
tryptophan biosynthesis,
phospholipid biosynthesis II,
homocysteine and cysteine interconversion,
photorespiration,
seleno-amino acid biosynthesis,
glycine biosynthesis,
tRNA charging,
serine racemization,
phosphatidylethanolamine biosynthesis I,
serine biosynthesis,
choline biosynthesis I,
cysteine biosynthesis I,
folate transformations II 		-0.64 0.31 -0.32 C0231
52 C0254 Threonine D,L-Threonine L-Threonine isoleucine biosynthesis I (from threonine),
glycine biosynthesis,
threonine biosynthesis from homoserine,
tRNA charging 		-0.59 0.34 -0.32 C0254
53 C0055 Alanine D,L-Alanine D-Alanine; L-Alanine alanine degradation III,
beta-alanine biosynthesis II,
biotin biosynthesis II,
IAA biosynthesis II,
molybdenum cofactor biosynthesis II (eukaryotes),
phenylalanine degradation III,
alanine biosynthesis III,
IAA biosynthesis I,
alanine biosynthesis II,
tRNA charging,
molybdenum cofactor biosynthesis,
4-aminobutyrate degradation IV,
alanine degradation II (to D-lactate),
indole-3-acetyl-amino acid biosynthesis,
glutamate degradation IV 		-0.57 0.29 -0.32 C0055