AGICode | AT5G04180 |
Description | alpha carbonic anhydrase 3 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G04180 | alpha carbonic anhydrase 3 | alpha carbonic anhydrase 3, ALPHA CARBONIC ANHYDRASE 3 |
1 | 0.32 | -0.32 | ||
2 | AT1G76020 | Thioredoxin superfamily protein | 0.66 | 0.32 | -0.3 | |||
3 | AT4G24020 | NIN like protein 7 | NIN like protein 7 | 0.65 | 0.31 | -0.29 | ||
4 | AT2G07180 | Protein kinase superfamily protein | 0.64 | 0.29 | -0.33 | |||
5 | AT1G27595 | CONTAINS InterPro DOMAIN/s: Symplekin tight junction protein C-terminal (InterPro:IPR022075); BEST Arabidopsis thaliana protein match is: HEAT repeat-containing protein (TAIR:AT5G01400.1); Has 593 Blast hits to 297 proteins in 111 species: Archae - 0; Bacteria - 3; Metazoa - 139; Fungi - 49; Plants - 57; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink). |
-0.63 | 0.3 | -0.31 | |||
6 | AT5G05520 | Outer membrane OMP85 family protein | -0.62 | 0.31 | -0.32 | |||
7 | AT3G17950 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.62 | 0.32 | -0.33 | |||
8 | AT2G45720 | ARM repeat superfamily protein | 0.61 | 0.31 | -0.33 | |||
9 | AT5G14900 | helicase associated (HA2) domain-containing protein | 0.61 | 0.31 | -0.31 | |||
10 | AT5G45140 | nuclear RNA polymerase C2 | nuclear RNA polymerase C2 | -0.61 | 0.31 | -0.31 | ||
11 | AT3G20000 | translocase of the outer mitochondrial membrane 40 | translocase of the outer mitochondrial membrane 40 |
-0.61 | 0.31 | -0.31 | ||
12 | AT3G56890 | F-box associated ubiquitination effector family protein | -0.61 | 0.31 | -0.33 | |||
13 | AT3G52690 | RNI-like superfamily protein | -0.61 | 0.32 | -0.31 | |||
14 | AT2G45920 | U-box domain-containing protein | -0.6 | 0.33 | -0.32 | |||
15 | AT3G01350 | Major facilitator superfamily protein | 0.6 | 0.31 | -0.32 | |||
16 | AT4G23880 | unknown protein; Has 73 Blast hits to 69 proteins in 22 species: Archae - 0; Bacteria - 4; Metazoa - 9; Fungi - 2; Plants - 18; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink). |
0.6 | 0.31 | -0.32 | |||
17 | AT5G51320 | transposable element gene | 0.6 | 0.28 | -0.31 | |||
18 | AT1G17040 | SH2 domain protein A | ARABIDOPSIS THALIANA SH2 DOMAIN PROTEIN A, SH2 domain protein A, STAT-TYPE LINKER-SH2 DOMAIN FACTOR A |
0.6 | 0.3 | -0.32 | ||
19 | AT1G33920 | phloem protein 2-A4 | phloem protein 2-A4, phloem protein 2-A4 |
0.6 | 0.3 | -0.33 | ||
20 | AT2G39380 | exocyst subunit exo70 family protein H2 | exocyst subunit exo70 family protein H2, exocyst subunit exo70 family protein H2 |
-0.59 | 0.32 | -0.31 | ||
21 | AT2G10465 | transposable element gene | 0.58 | 0.29 | -0.32 | |||
22 | AT3G20210 | delta vacuolar processing enzyme | delta vacuolar processing enzyme, DELTA VACUOLAR PROCESSING ENZYME |
-0.58 | 0.31 | -0.33 | ||
23 | AT1G61410 | DNA double-strand break repair and VJ recombination XRCC4 | 0.58 | 0.29 | -0.31 | |||
24 | AT4G22800 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.58 | 0.31 | -0.31 | |||
25 | AT1G62450 | Immunoglobulin E-set superfamily protein | 0.57 | 0.32 | -0.32 | |||
26 | AT1G53350 | Disease resistance protein (CC-NBS-LRR class) family | 0.57 | 0.31 | -0.31 | |||
27 | AT1G73310 | serine carboxypeptidase-like 4 | serine carboxypeptidase-like 4 | -0.57 | 0.31 | -0.29 | ||
28 | AT4G13810 | receptor like protein 47 | receptor like protein 47, receptor like protein 47 |
0.57 | 0.32 | -0.32 | ||
29 | AT1G24210 | Paired amphipathic helix (PAH2) superfamily protein | 0.57 | 0.3 | -0.32 | |||
30 | AT1G77340 | Pentatricopeptide repeat (PPR) superfamily protein | 0.57 | 0.32 | -0.31 | |||
31 | AT3G30370 | CONTAINS InterPro DOMAIN/s: Transposase, MuDR, plant (InterPro:IPR004332); BEST Arabidopsis thaliana protein match is: SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein (TAIR:AT1G18050.1); Has 35 Blast hits to 35 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.56 | 0.31 | -0.3 | |||
32 | AT5G06020 | Plant self-incompatibility protein S1 family | 0.56 | 0.31 | -0.3 | |||
33 | AT1G18830 | Transducin/WD40 repeat-like superfamily protein | -0.55 | 0.29 | -0.29 | |||
34 | AT4G27530 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G53895.1); Has 14 Blast hits to 14 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.55 | 0.28 | -0.31 | |||
35 | AT4G00830 | RNA-binding (RRM/RBD/RNP motifs) family protein | LHP1-Interacting Factor 2 | -0.55 | 0.31 | -0.32 | ||
36 | AT1G50140 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.55 | 0.32 | -0.33 | |||
37 | AT5G28550 | BEST Arabidopsis thaliana protein match is: homolog of separase (TAIR:AT4G22970.2); Has 25 Blast hits to 25 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.55 | 0.33 | -0.31 | |||
38 | AT5G38350 | Disease resistance protein (NBS-LRR class) family | 0.55 | 0.33 | -0.31 | |||
39 | AT1G67120 | ATPases;nucleotide binding;ATP binding;nucleoside-triphosphatases;transcription factor binding |
-0.55 | 0.32 | -0.31 | |||
40 | AT3G24750 | unknown protein; Has 25 Blast hits to 25 proteins in 12 species: Archae - 0; Bacteria - 8; Metazoa - 2; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.55 | 0.31 | -0.31 | |||
41 | AT2G05720 | Transducin/WD40 repeat-like superfamily protein | 0.54 | 0.3 | -0.31 | |||
42 | AT1G67990 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
TAPETUM-SPECIFIC METHYLTRANSFERASE 1, TSM1 |
0.54 | 0.29 | -0.31 | ||
43 | AT3G23650 | protein kinase-related | 0.54 | 0.32 | -0.3 | |||
44 | AT4G05240 | Ubiquitin-like superfamily protein | -0.54 | 0.29 | -0.28 | |||
45 | ATCG01010 | NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein | NDHF | 0.54 | 0.33 | -0.31 | ||
46 | AT3G27325 | hydrolases, acting on ester bonds | -0.54 | 0.3 | -0.33 | |||
47 | AT5G16300 | Vps51/Vps67 family (components of vesicular transport) protein |
-0.54 | 0.32 | -0.31 | |||
48 | AT2G33520 | unknown protein; Has 68 Blast hits to 68 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 2; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.54 | 0.31 | -0.3 | |||
49 | AT4G31930 | Mitochondrial glycoprotein family protein | 0.53 | 0.32 | -0.31 | |||
50 | AT2G01770 | vacuolar iron transporter 1 | ATVIT1, vacuolar iron transporter 1 |
-0.53 | 0.31 | -0.33 | ||
51 | AT5G62900 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50090.1); Has 157 Blast hits to 157 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.53 | 0.33 | -0.32 | |||
52 | AT2G39790 | Mitochondrial glycoprotein family protein | 0.53 | 0.36 | -0.29 | |||
53 | AT3G01240 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01230.1); Has 12 Blast hits to 12 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
0.53 | 0.29 | -0.28 | |||
54 | AT2G42040 | CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 219 Blast hits to 219 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 215; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
0.53 | 0.32 | -0.32 | |||
55 | AT4G15320 | cellulose synthase-like B6 | cellulose synthase-like B6, CELLULOSE SYNTHASE LIKE B6, CSLB06, cellulose synthase-like B6 |
0.53 | 0.32 | -0.33 | ||
56 | AT1G80740 | chromomethylase 1 | chromomethylase 1, DNA METHYLTRANSFERASE 4 |
0.53 | 0.31 | -0.31 | ||
57 | AT3G27290 | RNI-like superfamily protein | 0.53 | 0.32 | -0.29 | |||
58 | AT4G09510 | cytosolic invertase 2 | alkaline/neutral invertase I, cytosolic invertase 2 |
-0.52 | 0.32 | -0.32 | ||
59 | AT2G46960 | cytochrome P450, family 709, subfamily B, polypeptide 1 | cytochrome P450, family 709, subfamily B, polypeptide 1 |
0.52 | 0.32 | -0.3 | ||
60 | AT3G04170 | RmlC-like cupins superfamily protein | 0.52 | 0.32 | -0.32 | |||
61 | AT1G60400 | F-box/RNI-like superfamily protein | 0.52 | 0.31 | -0.33 | |||
62 | AT4G16860 | Disease resistance protein (TIR-NBS-LRR class) family | recognition of peronospora parasitica 4 |
0.52 | 0.33 | -0.3 | ||
63 | AT5G25410 | Protein of Unknown Function (DUF239) | -0.52 | 0.32 | -0.31 | |||
64 | AT4G13230 | Late embryogenesis abundant protein (LEA) family protein | 0.51 | 0.28 | -0.32 | |||
65 | AT2G16690 | transposable element gene | 0.51 | 0.32 | -0.32 | |||
66 | AT2G45550 | cytochrome P450, family 76, subfamily C, polypeptide 4 | cytochrome P450, family 76, subfamily C, polypeptide 4 |
0.51 | 0.32 | -0.32 | ||
67 | AT3G13400 | SKU5 similar 13 | SKU5 similar 13 | -0.51 | 0.34 | -0.32 | ||
68 | AT2G04890 | SCARECROW-like 21 | SCARECROW-like 21 | 0.51 | 0.32 | -0.34 | ||
69 | AT2G20430 | ROP-interactive CRIB motif-containing protein 6 | ROP-interactive CRIB motif-containing protein 6 |
-0.51 | 0.31 | -0.33 | ||
70 | AT1G13610 | alpha/beta-Hydrolases superfamily protein | 0.51 | 0.3 | -0.32 | |||
71 | AT4G35520 | MUTL protein homolog 3 | ATMLH3, MUTL protein homolog 3 | -0.5 | 0.32 | -0.31 | ||
72 | AT3G08730 | protein-serine kinase 1 | ARABIDOPSIS THALIANA PROTEIN-SERINE KINASE 1, ARABIDOPSIS THALIANA PROTEIN-SERINE KINASE 6, ATS6K1, protein-serine kinase 1, ROTEIN-SERINE KINASE 6, P70 RIBOSOMAL S6 KINASE |
-0.5 | 0.31 | -0.31 | ||
73 | AT2G41830 | Uncharacterized protein | -0.5 | 0.31 | -0.32 | |||
74 | AT4G08880 | transposable element gene | -0.5 | 0.33 | -0.32 | |||
75 | AT2G33320 | Calcium-dependent lipid-binding (CaLB domain) family protein |
-0.49 | 0.31 | -0.3 | |||
76 | AT1G13310 | Endosomal targeting BRO1-like domain-containing protein | -0.49 | 0.31 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
77 | C0030 | 3-Methylsulfinyl-n-propylglucosinolate | - | 3-Methylsulfinylpropyl-glucosinolate | glucosinolate biosynthesis from homomethionine | 0.73 | 0.46 | -0.44 | ||
78 | C0261 | UDP-glucose | - | UDP-D-glucose | quercetin glucoside biosynthesis (Arabidopsis), abscisic acid glucose ester biosynthesis, anthocyanin biosynthesis (delphinidin 3-O-glucoside), UDP-glucose biosynthesis (from sucrose), 2,4,6-trinitrotoluene degradation, galactose degradation I (Leloir pathway), cytokinins-O-glucoside biosynthesis, trehalose biosynthesis I, dolichyl-diphosphooligosaccharide biosynthesis, phenolic malonylglucosides biosynthesis, callose biosynthesis, superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside), glucosinolate biosynthesis from hexahomomethionine, coniferin metabolism, glucosinolate biosynthesis from phenylalanine, xyloglucan biosynthesis, glucosinolate biosynthesis from pentahomomethionine, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), glucosinolate biosynthesis from dihomomethionine, cellulose biosynthesis, sinapate ester biosynthesis, superpathway of IAA conjugate biosynthesis, salicylate glucosides biosynthesis IV, sucrose biosynthesis I, glucosinolate biosynthesis from trihomomethionine, tetrahydrofolate biosynthesis II, sucrose degradation III, UDP-D-xylose and UDP-D-glucuronate biosynthesis, coumarin biosynthesis (via 2-coumarate), superpathway of sucrose and starch metabolism I (non-photosynthetic tissue), monolignol glucosides biosynthesis, glucosinolate biosynthesis from homomethionine, kaempferol glucoside biosynthesis (Arabidopsis), salicylate glucosides biosynthesis III, cytokinins 7-N-glucoside biosynthesis, galactose degradation III, cytokinins 9-N-glucoside biosynthesis, glucosinolate biosynthesis from tryptophan, UDP-galactose biosynthesis, salicylate glucosides biosynthesis II, stachyose degradation, superpathway of sucrose and starch metabolism II (photosynthetic tissue), UDP-glucose biosynthesis (from glucose 6-phosphate), sphingolipid biosynthesis (plants), glucosinolate biosynthesis from tetrahomomethionine, galactose degradation II, UDP-L-rhamnose biosynthesis |
0.73 | 0.46 | -0.49 | ||
79 | C0088 | FAD | - | FAD | cytokinins degradation, lysine degradation II, valine degradation I, isoleucine degradation I, flavin biosynthesis I (bacteria and plants) |
0.68 | 0.43 | -0.46 | ||
80 | C0006 | β-Homothreonine | L-β-Homothreonine | - | - | 0.66 | 0.49 | -0.45 | ||
81 | C0262 | UDP-glucuronic acid | - | UDP-D-glucuronate | xylan biosynthesis, UDP-D-glucuronate biosynthesis (from myo-inositol), UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate), UDP-D-apiose biosynthesis (from UDP-D-glucuronate), galactose degradation III, UDP-D-xylose and UDP-D-glucuronate biosynthesis |
0.65 | 0.43 | -0.45 | ||
82 | C0097 | Glucosamine-6-phosphate | D-Glucosamine-6-phosphate | D-Glucosamine-6-phosphate | UDP-N-acetyl-D-glucosamine biosynthesis II | 0.6 | 0.34 | -0.3 | ||
83 | C0195 | Phenylpyruvic acid | - | Phenylpyruvate | phenylalanine degradation III | 0.59 | 0.45 | -0.45 |