AT5G04380 : -
Query Information
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AGICode AT5G04380
Description S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT5G04380 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 1 0.31 -0.3
2 AT2G31960 glucan synthase-like 3 glucan synthase-like 3, ATGSL3,
GSL03, glucan synthase-like 3		 0.73 0.33 -0.33
3 ATMG00450 hypothetical protein ORF106B -0.69 0.33 -0.28
4 AT4G14420 HR-like lesion-inducing protein-related -0.68 0.32 -0.32
5 AT5G05010 clathrin adaptor complexes medium subunit family protein -0.67 0.34 -0.32
6 AT5G55610 unknown protein; LOCATED IN: mitochondrion, chloroplast,
plastid, membrane; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.67 0.33 -0.3
7 AT4G20780 calmodulin like 42 calmodulin like 42 -0.66 0.33 -0.32
8 AT1G75510 Transcription initiation factor IIF, beta subunit -0.66 0.32 -0.3
9 AT1G26340 cytochrome B5 isoform A ARABIDOPSIS CYTOCHROME B5 ISOFORM
A, B5 #6, cytochrome B5 isoform A		 -0.65 0.31 -0.3
10 AT2G47640 Small nuclear ribonucleoprotein family protein -0.65 0.32 -0.32
11 AT1G69030 BSD domain-containing protein -0.65 0.31 -0.3
12 AT2G41110 calmodulin 2 ATCAL5, calmodulin 2 -0.65 0.29 -0.31
13 AT3G05490 ralf-like 22 ralf-like 22 -0.64 0.33 -0.31
14 AT4G30060 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.64 0.32 -0.35
15 AT3G54120 Reticulon family protein -0.64 0.32 -0.32
16 AT2G44820 unknown protein; Has 70 Blast hits to 70 proteins in 25
species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 4;
Plants - 47; Viruses - 0; Other Eukaryotes - 10 (source:
NCBI BLink).		 -0.64 0.32 -0.31
17 AT4G29735 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Uncharacterised protein family UPF0197
(InterPro:IPR007915); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.63 0.29 -0.3
18 AT5G43810 Stabilizer of iron transporter SufD / Polynucleotidyl
transferase		 ARGONAUTE 10, PINHEAD, ZWILLE 0.63 0.3 -0.32
19 AT4G00300 fringe-related protein -0.63 0.32 -0.3
20 AT3G14290 20S proteasome alpha subunit E2 20S proteasome alpha subunit E2 -0.63 0.32 -0.31
21 AT2G36880 methionine adenosyltransferase 3 methionine adenosyltransferase 3 -0.63 0.33 -0.31
22 AT1G09330 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
integral to membrane; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF846, eukaryotic
(InterPro:IPR008564); Has 518 Blast hits to 518 proteins in
206 species: Archae - 0; Bacteria - 0; Metazoa - 193; Fungi
- 145; Plants - 73; Viruses - 0; Other Eukaryotes - 107
(source: NCBI BLink).		 -0.63 0.33 -0.29
23 AT2G36310 uridine-ribohydrolase 1 nucleoside hydrolase 1,
uridine-ribohydrolase 1		 -0.63 0.3 -0.33
24 AT3G15710 Peptidase S24/S26A/S26B/S26C family protein -0.63 0.32 -0.33
25 AT1G17810 beta-tonoplast intrinsic protein beta-tonoplast intrinsic protein 0.62 0.33 -0.3
26 AT3G63210 Protein of unknown function (DUF581) MEDIATOR OF ABA-REGULATED DORMANCY
1		 0.62 0.3 -0.32
27 AT3G49720 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, Golgi apparatus, plasma
membrane, membrane; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G65810.1); Has 64 Blast hits to 64 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.62 0.31 -0.31
28 AT5G12190 RNA-binding (RRM/RBD/RNP motifs) family protein -0.62 0.29 -0.31
29 AT1G31940 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G35585.1); Has 67 Blast hits to 67 proteins in 17
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.62 0.31 -0.34
30 AT1G27450 adenine phosphoribosyl transferase 1 adenine phosphoribosyl transferase
1, ARABIDOPSIS THALIANA ADENINE
PHOSPHORIBOSYLTRANSFERASE 1		 -0.61 0.32 -0.35
31 AT1G67350 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.61 0.3 -0.32
32 AT5G54900 RNA-binding protein 45A RNA-binding protein 45A,
RNA-binding protein 45A		 -0.61 0.33 -0.32
33 AT4G37970 cinnamyl alcohol dehydrogenase 6 ATCAD6, cinnamyl alcohol
dehydrogenase 6		 0.6 0.31 -0.31
34 AT1G77780 Glycosyl hydrolase superfamily protein -0.6 0.3 -0.32
35 AT5G51880 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.6 0.33 -0.31
36 AT1G13000 Protein of unknown function (DUF707) -0.6 0.31 -0.31
37 AT5G52230 methyl-CPG-binding domain protein 13 methyl-CPG-binding domain protein
13		 0.6 0.32 -0.32
38 AT5G66100 winged-helix DNA-binding transcription factor family
protein		 -0.6 0.34 -0.35
39 AT2G30870 glutathione S-transferase PHI 10 ARABIDOPSIS THALIANA GLUTATHIONE
S-TRANSFERASE PHI 10, ATGSTF4,
EARLY DEHYDRATION-INDUCED 13,
glutathione S-transferase PHI 10		 -0.59 0.32 -0.3
40 AT1G04430 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.59 0.32 -0.33
41 AT1G36000 LOB domain-containing protein 5 LOB domain-containing protein 5 -0.59 0.33 -0.33
42 AT1G68490 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast
hits to 125 proteins in 18 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.59 0.31 -0.3
43 AT3G02500 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G16030.1); Has 49 Blast hits
to 49 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.59 0.32 -0.3
44 AT5G63990 Inositol monophosphatase family protein -0.59 0.31 -0.31
45 AT1G30000 alpha-mannosidase 3 alpha-mannosidase 3 -0.59 0.33 -0.3
46 AT4G24830 arginosuccinate synthase family -0.59 0.31 -0.32
47 AT5G09890 Protein kinase family protein -0.59 0.3 -0.3
48 AT4G37050 PATATIN-like protein 4 phospholipase A IVC, PLA V,
patatin-related phospholipase III
beta, PATATIN-like protein 4		 0.59 0.31 -0.33
49 AT2G02520 RNA-directed DNA polymerase (reverse transcriptase)-related
family protein		 0.58 0.34 -0.3
50 AT3G58600 Adaptin ear-binding coat-associated protein 1 NECAP-1 -0.58 0.3 -0.31
51 AT4G18040 eukaryotic translation initiation factor 4E ARABIDOPSIS THALIANA EUKARYOTIC
TRANSLATION INITATION FACTOR 4E1,
CUCUMOVIRUS MULTIPLICATION 1,
eukaryotic translation initiation
factor 4E, eukaryotic translation
Initiation Factor 4E1		 -0.58 0.33 -0.31
52 AT1G75110 Nucleotide-diphospho-sugar transferase family protein REDUCED RESIDUAL ARABINOSE 2 0.58 0.29 -0.33
53 AT1G09010 glycoside hydrolase family 2 protein 0.58 0.32 -0.31
54 AT1G78460 SOUL heme-binding family protein -0.57 0.31 -0.32
55 AT3G23590 REF4-related 1 MED33A, REF4-related 1 0.57 0.33 -0.3
56 AT5G48580 FK506- and rapamycin-binding protein 15 kD-2 FK506- and rapamycin-binding
protein 15 kD-2		 -0.57 0.31 -0.32
57 AT4G09720 RAB GTPase homolog G3A RAB GTPase homolog G3A, RAB GTPase
homolog G3A		 -0.57 0.3 -0.31
58 AT5G18920 Cox19-like CHCH family protein -0.57 0.31 -0.32
59 AT5G19870 Family of unknown function (DUF716) 0.56 0.3 -0.32
60 AT4G30940 BTB/POZ domain with WD40/YVTN repeat-like protein 0.56 0.32 -0.32
61 AT5G55240 ARABIDOPSIS THALIANA PEROXYGENASE 2 ARABIDOPSIS THALIANA PEROXYGENASE
2		 0.56 0.32 -0.33
62 AT1G13180 Actin-like ATPase superfamily protein ACTIN-RELATED PROTEIN 3,
ARABIDOPSIS THALIANA ACTIN-RELATED
PROTEIN 3, DISTORTED TRICHOMES 1		 -0.56 0.3 -0.3
63 AT1G47830 SNARE-like superfamily protein -0.56 0.33 -0.33
64 AT1G52280 RAB GTPase homolog G3D RAB GTPase homolog G3D, RAB GTPase
homolog G3D		 -0.56 0.33 -0.32
65 AT3G23640 heteroglycan glucosidase 1 heteroglycan glucosidase 1 0.56 0.31 -0.29
66 AT5G46860 Syntaxin/t-SNARE family protein ARABIDOPSIS THALIANA SYNTAXIN OF
PLANTS 22, ARABIDOPSIS THALIANA
VACUOLAR MORPHOLOGY 3, SHOOT
GRAVITROPISM 3, SYNTAXIN OF PLANTS
22, VACUOLAR MORPHOLOGY 3		 -0.56 0.32 -0.31
67 AT1G56570 Tetratricopeptide repeat (TPR)-like superfamily protein PENTATRICOPEPTIDE REPEAT PROTEIN
FOR GERMINATION ON NaCl		 0.55 0.31 -0.32
68 AT5G39910 Pectin lyase-like superfamily protein 0.55 0.33 -0.32
69 AT3G17600 indole-3-acetic acid inducible 31 indole-3-acetic acid inducible 31 -0.55 0.31 -0.31
70 AT4G12700 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G04280.1); Has 136 Blast hits
to 136 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other
Eukaryotes - 11 (source: NCBI BLink).		 0.55 0.32 -0.31
71 AT4G39756 Galactose oxidase/kelch repeat superfamily protein -0.55 0.32 -0.31
72 AT1G05460 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 SILENCING DEFECTIVE 0.55 0.3 -0.31
73 AT4G37670 N-acetyl-l-glutamate synthase 2 N-acetyl-l-glutamate synthase 2 -0.55 0.32 -0.32
74 AT1G47380 Protein phosphatase 2C family protein -0.55 0.34 -0.32
75 AT4G37230 Photosystem II manganese-stabilising protein (PsbO) family 0.55 0.32 -0.31
76 AT5G40260 Nodulin MtN3 family protein AtSWEET8, SWEET8 0.55 0.33 -0.31
77 AT1G19240 unknown protein; Has 24 Blast hits to 24 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.55 0.33 -0.31
78 AT2G41100 Calcium-binding EF hand family protein ARABIDOPSIS THALIANA CALMODULIN
LIKE 4, TOUCH 3		 -0.55 0.32 -0.32
79 AT1G15470 Transducin/WD40 repeat-like superfamily protein -0.55 0.29 -0.31
80 AT3G53040 late embryogenesis abundant protein, putative / LEA
protein, putative		 0.54 0.32 -0.31
81 AT1G65350 ubiquitin 13 ubiquitin 13 0.54 0.33 -0.32
82 AT2G15010 Plant thionin 0.53 0.34 -0.3
83 AT5G17950 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.53 0.32 -0.31
84 AT2G13270 transposable element gene 0.53 0.32 -0.33
85 AT4G36600 Late embryogenesis abundant (LEA) protein 0.53 0.31 -0.32
86 AT4G02690 Bax inhibitor-1 family protein 0.53 0.3 -0.31
87 AT4G35290 glutamate receptor 2 ATGLR3.2, ATGLUR2, GLUTAMATE
RECEPTOR 3.2, glutamate receptor 2		 0.52 0.33 -0.31
88 AT3G61900 SAUR-like auxin-responsive protein family 0.52 0.31 -0.32
89 AT2G40770 zinc ion binding;DNA binding;helicases;ATP binding;nucleic
acid binding		 0.52 0.33 -0.31
90 AT4G20910 double-stranded RNA binding protein-related / DsRBD
protein-related		 CORYMBOSA 2, HUA ENHANCER 1 0.52 0.33 -0.31
91 AT5G19880 Peroxidase superfamily protein 0.51 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
92 C0256 Tryptamine - Tryptamine IAA biosynthesis I 0.74 0.5 -0.46 C0256
93 C0242 Suberic acid - - - 0.61 0.44 -0.46
94 C0148 Methionine D,L-Methionine L-Methionine thiamine biosynthesis II,
S-adenosyl-L-methionine biosynthesis,
S-adenosyl-L-methionine cycle II,
tRNA charging,
methionine degradation II,
ethylene biosynthesis I (plants),
methionine degradation I (to homocysteine),
S-methylmethionine cycle,
methionine salvage pathway,
methionine biosynthesis II,
folate transformations II,
homomethionine biosynthesis,
lipoate biosynthesis and incorporation I,
S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation 		0.53 0.3 -0.32 C0148